RNA–Protein interactions for RNA: ENST00000563639.2

AC027458.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC027458.1, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027458.1-201ENST00000563639 ZIC2O95409 532 aaPredicted RBP13.1□□□□□ -0.31
AC027458.1-201ENST00000563639 FBXO45P0C2W1 286 aa13.1□□□□□ -0.31
AC027458.1-201ENST00000563639 CDV3Q9UKY7 258 aaKnown RBP13.1□□□□□ -0.31
AC027458.1-201ENST00000563639 NDUFB9Q9Y6M9 179 aa13.1□□□□□ -0.31
AC027458.1-201ENST00000563639 CCDC116Q8IYX3 515 aa13.09□□□□□ -0.31
AC027458.1-201ENST00000563639 TRIM47Q96LD4 638 aa13.08□□□□□ -0.32
AC027458.1-201ENST00000563639 APBB1O00213 710 aa13.07□□□□□ -0.32
AC027458.1-201ENST00000563639 INTS6LQ5JSJ4 861 aaKnown RBP13.07□□□□□ -0.32
AC027458.1-201ENST00000563639 SNRPBP14678 240 aaKnown RBP13.06□□□□□ -0.32
AC027458.1-201ENST00000563639 DZIP3Q86Y13 1208 aaKnown RBP13.06□□□□□ -0.32
AC027458.1-201ENST00000563639 SENP2Q9HC62 589 aa13.06□□□□□ -0.32
AC027458.1-201ENST00000563639 PPP1R26Q5T8A7 1209 aaPredicted RBP13.05□□□□□ -0.32
AC027458.1-201ENST00000563639 EMILIN1Q9Y6C2 1016 aa13.05□□□□□ -0.32
AC027458.1-201ENST00000563639 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
AC027458.1-201ENST00000563639 MRPL14Q6P1L8 145 aaKnown RBP13.04□□□□□ -0.32
AC027458.1-201ENST00000563639 ZNF775Q96BV0 537 aaPredicted RBP13.04□□□□□ -0.32
AC027458.1-201ENST00000563639 TBC1D2BQ9UPU7 963 aa13.04□□□□□ -0.32
AC027458.1-201ENST00000563639 NR1H3Q13133 447 aa13.02□□□□□ -0.33
AC027458.1-201ENST00000563639 KIFC2Q96AC6 838 aa13.02□□□□□ -0.33
AC027458.1-201ENST00000563639 ZFP42Q96MM3 310 aa13.02□□□□□ -0.33
AC027458.1-201ENST00000563639 MCM6Q14566 821 aa13.01□□□□□ -0.33
AC027458.1-201ENST00000563639 MEIOBQ8N635 442 aa13.01□□□□□ -0.33
AC027458.1-201ENST00000563639 PCDHB9Q9Y5E1 797 aa13.01□□□□□ -0.33
AC027458.1-201ENST00000563639 ESPNB1AK53 854 aa13□□□□□ -0.33
AC027458.1-201ENST00000563639 DHX9Q08211 1270 aaKnown RBP13□□□□□ -0.33
AC027458.1-201ENST00000563639 PURBQ96QR8 312 aaKnown RBP13□□□□□ -0.33
AC027458.1-201ENST00000563639 PGPEP1Q9NXJ5 209 aa12.99□□□□□ -0.33
AC027458.1-201ENST00000563639 RAB15P59190 212 aa12.98□□□□□ -0.33
AC027458.1-201ENST00000563639 CBLBQ13191 982 aa12.97□□□□□ -0.33
AC027458.1-201ENST00000563639 IRF5Q13568 498 aa12.97□□□□□ -0.33
AC027458.1-201ENST00000563639 TMEM132AQ24JP5 1023 aa12.97□□□□□ -0.33
AC027458.1-201ENST00000563639 TMPRSS4Q9NRS4 437 aa12.97□□□□□ -0.33
AC027458.1-201ENST00000563639 SCARF1Q14162 830 aa12.96□□□□□ -0.33
AC027458.1-201ENST00000563639 LINC00528Q8N1L1 170 aa12.96□□□□□ -0.33
AC027458.1-201ENST00000563639 GDPD2Q9HCC8 539 aa12.96□□□□□ -0.33
AC027458.1-201ENST00000563639 ERVH48-1M5A8F1 160 aa12.95□□□□□ -0.34
AC027458.1-201ENST00000563639 GIGYF1O75420 1035 aaPredicted RBP12.95□□□□□ -0.34
AC027458.1-201ENST00000563639 C6orf118Q5T5N4 469 aa12.95□□□□□ -0.34
AC027458.1-201ENST00000563639 Q6ZVU0 165 aa12.95□□□□□ -0.34
AC027458.1-201ENST00000563639 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
AC027458.1-201ENST00000563639 PRM3Q9NNZ6 103 aa12.94□□□□□ -0.34
AC027458.1-201ENST00000563639 ZNF784Q8NCA9 323 aaPredicted RBP12.93□□□□□ -0.34
AC027458.1-201ENST00000563639 LILRA1O75019 489 aa12.91□□□□□ -0.34
AC027458.1-201ENST00000563639 BMP2P12643 396 aa12.91□□□□□ -0.34
AC027458.1-201ENST00000563639 MCCD1P59942 119 aaPredicted RBP12.91□□□□□ -0.34
AC027458.1-201ENST00000563639 TSEN34Q9BSV6 310 aaKnown RBP12.91□□□□□ -0.34
AC027458.1-201ENST00000563639 ZNF330Q9Y3S2 320 aaPredicted RBP12.91□□□□□ -0.34
AC027458.1-201ENST00000563639 UPP2O95045 317 aa12.9□□□□□ -0.34
AC027458.1-201ENST00000563639 ABL2P42684 1182 aa12.89□□□□□ -0.35
AC027458.1-201ENST00000563639 SOBPA7XYQ1 873 aa12.88□□□□□ -0.35
AC027458.1-201ENST00000563639 ADD1P35611 737 aaKnown RBP12.88□□□□□ -0.35
AC027458.1-201ENST00000563639 AGBL1Q96MI9 1066 aa12.88□□□□□ -0.35
AC027458.1-201ENST00000563639 ZNF592Q92610 1267 aa12.87□□□□□ -0.35
AC027458.1-201ENST00000563639 COG6Q9Y2V7 657 aa12.87□□□□□ -0.35
AC027458.1-201ENST00000563639 VAC14Q08AM6 782 aa12.86□□□□□ -0.35
AC027458.1-201ENST00000563639 CYLDQ9NQC7 956 aa12.86□□□□□ -0.35
AC027458.1-201ENST00000563639 SOS2Q07890 1332 aaPredicted RBP12.86□□□□□ -0.35
AC027458.1-201ENST00000563639 LCE2AQ5TA79 106 aaPredicted RBP12.85□□□□□ -0.35
AC027458.1-201ENST00000563639 RNF20Q5VTR2 975 aa12.85□□□□□ -0.35
AC027458.1-201ENST00000563639 SPINT1O43278 529 aa12.84□□□□□ -0.35
AC027458.1-201ENST00000563639 NFX1Q12986 1120 aaKnown RBP12.84□□□□□ -0.35
AC027458.1-201ENST00000563639 KDF1Q8NAX2 398 aaPredicted RBP12.84□□□□□ -0.35
AC027458.1-201ENST00000563639 POM121Q96HA1 1249 aa12.84□□□□□ -0.35
AC027458.1-201ENST00000563639 CEP126Q9P2H0 1117 aa12.84□□□□□ -0.35
AC027458.1-201ENST00000563639 ADH1AP07327 375 aa12.83□□□□□ -0.36
AC027458.1-201ENST00000563639 EIF4G2P78344 907 aaKnown RBP eCLIP12.83□□□□□ -0.36
AC027458.1-201ENST00000563639 RELBQ01201 579 aa12.83□□□□□ -0.36
AC027458.1-201ENST00000563639 TREML4Q6UXN2 200 aa12.83□□□□□ -0.36
AC027458.1-201ENST00000563639 CCDC125Q86Z20 511 aa12.83□□□□□ -0.36
AC027458.1-201ENST00000563639 TERTO14746 1132 aaKnown RBP12.82□□□□□ -0.36
AC027458.1-201ENST00000563639 MAN1A2O60476 641 aa12.82□□□□□ -0.36
AC027458.1-201ENST00000563639 FLIIQ13045 1269 aa12.82□□□□□ -0.36
AC027458.1-201ENST00000563639 DNMT3LQ9UJW3 386 aa12.82□□□□□ -0.36
AC027458.1-201ENST00000563639 ERVK-9P63128 1117 aa12.81□□□□□ -0.36
AC027458.1-201ENST00000563639 WASHC4Q2M389 1173 aa12.8□□□□□ -0.36
AC027458.1-201ENST00000563639 ZNF395Q9H8N7 513 aaPredicted RBP12.8□□□□□ -0.36
AC027458.1-201ENST00000563639 NXF1Q9UBU9 619 aaKnown RBP12.8□□□□□ -0.36
AC027458.1-201ENST00000563639 PCDHB11Q9Y5F2 797 aa12.8□□□□□ -0.36
AC027458.1-201ENST00000563639 TTLL8A6PVC2 850 aa12.79□□□□□ -0.36
AC027458.1-201ENST00000563639 SCTRP47872 440 aa12.79□□□□□ -0.36
AC027458.1-201ENST00000563639 WFS1O76024 890 aa12.78□□□□□ -0.36
AC027458.1-201ENST00000563639 PTGIRP43119 386 aa12.78□□□□□ -0.36
AC027458.1-201ENST00000563639 CTSOP43234 321 aaPredicted RBP12.78□□□□□ -0.36
AC027458.1-201ENST00000563639 LCE2CQ5TA81 110 aa12.78□□□□□ -0.36
AC027458.1-201ENST00000563639 CC2D2BQ6DHV5 1058 aa12.78□□□□□ -0.36
AC027458.1-201ENST00000563639 PHTF2Q8N3S3 785 aa12.78□□□□□ -0.36
AC027458.1-201ENST00000563639 CCDC85AQ96PX6 553 aaPredicted RBP12.78□□□□□ -0.36
AC027458.1-201ENST00000563639 INSM2Q96T92 566 aaPredicted RBP12.78□□□□□ -0.36
AC027458.1-201ENST00000563639 FIGNL2A6NMB9 653 aa12.75□□□□□ -0.37
AC027458.1-201ENST00000563639 UBTFP17480 764 aaKnown RBP12.75□□□□□ -0.37
AC027458.1-201ENST00000563639 VEGFBP49765 207 aa12.75□□□□□ -0.37
AC027458.1-201ENST00000563639 TSGA10IPQ3SY00 556 aa12.75□□□□□ -0.37
AC027458.1-201ENST00000563639 TRIM52Q96A61 297 aa12.75□□□□□ -0.37
AC027458.1-201ENST00000563639 CDCA7Q9BWT1 371 aaPredicted RBP12.75□□□□□ -0.37
AC027458.1-201ENST00000563639 ATP5J2-PTCD1G3V325 749 aa12.73□□□□□ -0.37
AC027458.1-201ENST00000563639 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.73□□□□□ -0.37
AC027458.1-201ENST00000563639 NPAS3Q8IXF0 933 aa12.73□□□□□ -0.37
AC027458.1-201ENST00000563639 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
AC027458.1-201ENST00000563639 POLMQ9NP87 494 aaPredicted RBP12.73□□□□□ -0.37
AC027458.1-201ENST00000563639 H3BM21 787 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms