RNA–Protein interactions for RNA: ENST00000563253.5

NAE1-211, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-211ENST00000563253 C11orf95C9JLR9 678 aaPredicted RBP9.35□□□□□ -0.91
NAE1-211ENST00000563253 GPR37L1O60883 481 aa9.35□□□□□ -0.91
NAE1-211ENST00000563253 TRIM46Q7Z4K8 759 aa9.35□□□□□ -0.91
NAE1-211ENST00000563253 CCDC116Q8IYX3 515 aa9.35□□□□□ -0.91
NAE1-211ENST00000563253 ZFAND3Q9H8U3 227 aa9.35□□□□□ -0.91
NAE1-211ENST00000563253 SENP2Q9HC62 589 aa9.35□□□□□ -0.91
NAE1-211ENST00000563253 FBXO45P0C2W1 286 aa9.34□□□□□ -0.91
NAE1-211ENST00000563253 TRIM47Q96LD4 638 aa9.34□□□□□ -0.91
NAE1-211ENST00000563253 NBPF20Q3BBV1 942 aa9.33□□□□□ -0.92
NAE1-211ENST00000563253 DZIP3Q86Y13 1208 aaKnown RBP9.33□□□□□ -0.92
NAE1-211ENST00000563253 EMILIN1Q9Y6C2 1016 aa9.33□□□□□ -0.92
NAE1-211ENST00000563253 INTS6LQ5JSJ4 861 aaKnown RBP9.32□□□□□ -0.92
NAE1-211ENST00000563253 KIFC2Q96AC6 838 aa9.32□□□□□ -0.92
NAE1-211ENST00000563253 PPP1R26Q5T8A7 1209 aaPredicted RBP9.31□□□□□ -0.92
NAE1-211ENST00000563253 MRPL14Q6P1L8 145 aaKnown RBP9.31□□□□□ -0.92
NAE1-211ENST00000563253 SNRPBP14678 240 aaKnown RBP9.3□□□□□ -0.92
NAE1-211ENST00000563253 DHX9Q08211 1270 aaKnown RBP9.3□□□□□ -0.92
NAE1-211ENST00000563253 NR1H3Q13133 447 aa9.3□□□□□ -0.92
NAE1-211ENST00000563253 ZNF775Q96BV0 537 aaPredicted RBP9.3□□□□□ -0.92
NAE1-211ENST00000563253 TBC1D2BQ9UPU7 963 aa9.3□□□□□ -0.92
NAE1-211ENST00000563253 ZFP42Q96MM3 310 aa9.29□□□□□ -0.92
NAE1-211ENST00000563253 PGPEP1Q9NXJ5 209 aa9.29□□□□□ -0.92
NAE1-211ENST00000563253 PCDHB9Q9Y5E1 797 aa9.29□□□□□ -0.92
NAE1-211ENST00000563253 ESPNB1AK53 854 aa9.28□□□□□ -0.92
NAE1-211ENST00000563253 SCARF1Q14162 830 aa9.28□□□□□ -0.92
NAE1-211ENST00000563253 MCM6Q14566 821 aa9.28□□□□□ -0.92
NAE1-211ENST00000563253 MEIOBQ8N635 442 aa9.28□□□□□ -0.92
NAE1-211ENST00000563253 PRM3Q9NNZ6 103 aa9.28□□□□□ -0.92
NAE1-211ENST00000563253 PURBQ96QR8 312 aaKnown RBP9.27□□□□□ -0.93
NAE1-211ENST00000563253 RAB15P59190 212 aa9.26□□□□□ -0.93
NAE1-211ENST00000563253 TMEM132AQ24JP5 1023 aa9.26□□□□□ -0.93
NAE1-211ENST00000563253 SEPT12Q8IYM1 358 aa9.26□□□□□ -0.93
NAE1-211ENST00000563253 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
NAE1-211ENST00000563253 ZNF330Q9Y3S2 320 aaPredicted RBP9.26□□□□□ -0.93
NAE1-211ENST00000563253 CBLBQ13191 982 aa9.25□□□□□ -0.93
NAE1-211ENST00000563253 ZNF592Q92610 1267 aa9.25□□□□□ -0.93
NAE1-211ENST00000563253 ERVH48-1M5A8F1 160 aa9.24□□□□□ -0.93
NAE1-211ENST00000563253 UPP2O95045 317 aa9.24□□□□□ -0.93
NAE1-211ENST00000563253 MCCD1P59942 119 aaPredicted RBP9.24□□□□□ -0.93
NAE1-211ENST00000563253 C6orf118Q5T5N4 469 aa9.24□□□□□ -0.93
NAE1-211ENST00000563253 Q6ZVU0 165 aa9.24□□□□□ -0.93
NAE1-211ENST00000563253 TMPRSS4Q9NRS4 437 aa9.24□□□□□ -0.93
NAE1-211ENST00000563253 GIGYF1O75420 1035 aaPredicted RBP9.23□□□□□ -0.93
NAE1-211ENST00000563253 IRF5Q13568 498 aa9.23□□□□□ -0.93
NAE1-211ENST00000563253 ZNF784Q8NCA9 323 aaPredicted RBP9.23□□□□□ -0.93
NAE1-211ENST00000563253 TSEN34Q9BSV6 310 aaKnown RBP9.23□□□□□ -0.93
NAE1-211ENST00000563253 GDPD2Q9HCC8 539 aa9.23□□□□□ -0.93
NAE1-211ENST00000563253 BMP2P12643 396 aa9.22□□□□□ -0.93
NAE1-211ENST00000563253 ABL2P42684 1182 aa9.21□□□□□ -0.94
NAE1-211ENST00000563253 LILRA1O75019 489 aa9.2□□□□□ -0.94
NAE1-211ENST00000563253 RNF20Q5VTR2 975 aa9.19□□□□□ -0.94
NAE1-211ENST00000563253 CCDC125Q86Z20 511 aa9.19□□□□□ -0.94
NAE1-211ENST00000563253 EIF4G2P78344 907 aaKnown RBP eCLIP9.18□□□□□ -0.94
NAE1-211ENST00000563253 TRIM52Q96A61 297 aa9.18□□□□□ -0.94
NAE1-211ENST00000563253 AGBL1Q96MI9 1066 aa9.18□□□□□ -0.94
NAE1-211ENST00000563253 CYLDQ9NQC7 956 aa9.18□□□□□ -0.94
NAE1-211ENST00000563253 COG6Q9Y2V7 657 aa9.18□□□□□ -0.94
NAE1-211ENST00000563253 SOS2Q07890 1332 aaPredicted RBP9.17□□□□□ -0.94
NAE1-211ENST00000563253 SOBPA7XYQ1 873 aa9.17□□□□□ -0.94
NAE1-211ENST00000563253 SPINT1O43278 529 aa9.17□□□□□ -0.94
NAE1-211ENST00000563253 VAC14Q08AM6 782 aa9.17□□□□□ -0.94
NAE1-211ENST00000563253 FLIIQ13045 1269 aa9.17□□□□□ -0.94
NAE1-211ENST00000563253 ADH1AP07327 375 aa9.16□□□□□ -0.94
NAE1-211ENST00000563253 ADD1P35611 737 aaKnown RBP9.16□□□□□ -0.94
NAE1-211ENST00000563253 RELBQ01201 579 aa9.16□□□□□ -0.94
NAE1-211ENST00000563253 WASHC4Q2M389 1173 aa9.16□□□□□ -0.94
NAE1-211ENST00000563253 CEP126Q9P2H0 1117 aa9.16□□□□□ -0.94
NAE1-211ENST00000563253 TERTO14746 1132 aaKnown RBP9.15□□□□□ -0.94
NAE1-211ENST00000563253 MAN1A2O60476 641 aa9.15□□□□□ -0.94
NAE1-211ENST00000563253 NFX1Q12986 1120 aaKnown RBP9.15□□□□□ -0.94
NAE1-211ENST00000563253 TREML4Q6UXN2 200 aa9.15□□□□□ -0.94
NAE1-211ENST00000563253 ERVK-9P63128 1117 aa9.14□□□□□ -0.95
NAE1-211ENST00000563253 LCE2AQ5TA79 106 aaPredicted RBP9.14□□□□□ -0.95
NAE1-211ENST00000563253 KDF1Q8NAX2 398 aaPredicted RBP9.14□□□□□ -0.95
NAE1-211ENST00000563253 POM121Q96HA1 1249 aa9.14□□□□□ -0.95
NAE1-211ENST00000563253 NXF1Q9UBU9 619 aaKnown RBP9.14□□□□□ -0.95
NAE1-211ENST00000563253 DNMT3LQ9UJW3 386 aa9.14□□□□□ -0.95
NAE1-211ENST00000563253 PCDHB11Q9Y5F2 797 aa9.14□□□□□ -0.95
NAE1-211ENST00000563253 TTLL8A6PVC2 850 aa9.13□□□□□ -0.95
NAE1-211ENST00000563253 WFS1O76024 890 aa9.13□□□□□ -0.95
NAE1-211ENST00000563253 CC2D2BQ6DHV5 1058 aa9.13□□□□□ -0.95
NAE1-211ENST00000563253 ZNF395Q9H8N7 513 aaPredicted RBP9.13□□□□□ -0.95
NAE1-211ENST00000563253 UBTFP17480 764 aaKnown RBP9.12□□□□□ -0.95
NAE1-211ENST00000563253 INSM2Q96T92 566 aaPredicted RBP9.12□□□□□ -0.95
NAE1-211ENST00000563253 PTGIRP43119 386 aa9.11□□□□□ -0.95
NAE1-211ENST00000563253 CTSOP43234 321 aaPredicted RBP9.11□□□□□ -0.95
NAE1-211ENST00000563253 SCTRP47872 440 aa9.11□□□□□ -0.95
NAE1-211ENST00000563253 ATP5J2-PTCD1G3V325 749 aa9.1□□□□□ -0.95
NAE1-211ENST00000563253 RAD21O60216 631 aa9.1□□□□□ -0.95
NAE1-211ENST00000563253 SOX11P35716 441 aa9.1□□□□□ -0.95
NAE1-211ENST00000563253 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.1□□□□□ -0.952e-6■□□□□ 10.2
NAE1-211ENST00000563253 NPAS3Q8IXF0 933 aa9.1□□□□□ -0.95
NAE1-211ENST00000563253 PHTF2Q8N3S3 785 aa9.1□□□□□ -0.95
NAE1-211ENST00000563253 CCDC85AQ96PX6 553 aaPredicted RBP9.1□□□□□ -0.95
NAE1-211ENST00000563253 POLMQ9NP87 494 aaPredicted RBP9.1□□□□□ -0.95
NAE1-211ENST00000563253 FIGNL2A6NMB9 653 aa9.09□□□□□ -0.95
NAE1-211ENST00000563253 SLFNL1Q499Z3 407 aa9.09□□□□□ -0.95
NAE1-211ENST00000563253 WWC1Q8IX03 1113 aa9.09□□□□□ -0.95
NAE1-211ENST00000563253 VEGFBP49765 207 aa9.08□□□□□ -0.96
NAE1-211ENST00000563253 SEMA3FQ13275 785 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms