RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ANKRD36BQ8N2N9 1353 aa8.63□□□□□ -1.03
CNOT1-204ENST00000563130 PIK3C2AO00443 1686 aa8.63□□□□□ -1.03
CNOT1-204ENST00000563130 HDGFL2Q7Z4V5 671 aaPredicted RBP8.63□□□□□ -1.03
CNOT1-204ENST00000563130 NLRP13Q86W25 1043 aa8.63□□□□□ -1.03
CNOT1-204ENST00000563130 ZNF579Q8NAF0 562 aaKnown RBP8.63□□□□□ -1.03
CNOT1-204ENST00000563130 EDC4Q6P2E9 1401 aaKnown RBP8.62□□□□□ -1.03
CNOT1-204ENST00000563130 MARF1Q9Y4F3 1742 aaKnown RBP8.62□□□□□ -1.03
CNOT1-204ENST00000563130 AFF2P51816 1311 aa8.62□□□□□ -1.03
CNOT1-204ENST00000563130 SLIT2O94813 1529 aa8.62□□□□□ -1.03
CNOT1-204ENST00000563130 C11orf95C9JLR9 678 aaPredicted RBP8.62□□□□□ -1.03
CNOT1-204ENST00000563130 NUTM2GQ5VZR2 741 aa8.62□□□□□ -1.03
CNOT1-204ENST00000563130 ZNF772Q68DY9 489 aaPredicted RBP8.62□□□□□ -1.03
CNOT1-204ENST00000563130 POTEAQ6S8J7 498 aa8.62□□□□□ -1.03
CNOT1-204ENST00000563130 NGLY1Q96IV0 654 aa8.62□□□□□ -1.03
CNOT1-204ENST00000563130 BCL9LQ86UU0 1499 aa8.62□□□□□ -1.03
CNOT1-204ENST00000563130 MYOM1P52179 1685 aa8.62□□□□□ -1.03
CNOT1-204ENST00000563130 USP31Q70CQ4 1352 aa8.62□□□□□ -1.03
CNOT1-204ENST00000563130 SLIT3O75094 1523 aa8.61□□□□□ -1.03
CNOT1-204ENST00000563130 PHRF1Q9P1Y6 1649 aaKnown RBP8.61□□□□□ -1.03
CNOT1-204ENST00000563130 NLRP6P59044 892 aa8.61□□□□□ -1.03
CNOT1-204ENST00000563130 ILDR2Q71H61 639 aa8.61□□□□□ -1.03
CNOT1-204ENST00000563130 FAM83GA6ND36 823 aa8.6□□□□□ -1.03
CNOT1-204ENST00000563130 GCP02774 474 aa8.6□□□□□ -1.03
CNOT1-204ENST00000563130 HAP1P54257 671 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-204ENST00000563130 CPDO75976 1380 aa8.6□□□□□ -1.03
CNOT1-204ENST00000563130 USP54Q70EL1 1684 aa8.6□□□□□ -1.03
CNOT1-204ENST00000563130 USP21Q9UK80 565 aa8.6□□□□□ -1.03
CNOT1-204ENST00000563130 CLCN6P51797 869 aa8.59□□□□□ -1.03
CNOT1-204ENST00000563130 NME9Q86XW9 330 aa8.59□□□□□ -1.03
CNOT1-204ENST00000563130 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.59□□□□□ -1.03
CNOT1-204ENST00000563130 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
CNOT1-204ENST00000563130 KIAA0232Q92628 1395 aa8.59□□□□□ -1.03
CNOT1-204ENST00000563130 KIF7Q2M1P5 1343 aa8.59□□□□□ -1.04
CNOT1-204ENST00000563130 OVOS2A0A0J9YW53 1432 aa8.58□□□□□ -1.04
CNOT1-204ENST00000563130 OVOS2Q6IE36 1432 aa8.58□□□□□ -1.04
CNOT1-204ENST00000563130 UNC5CLQ8IV45 518 aa8.58□□□□□ -1.04
CNOT1-204ENST00000563130 PRDM11Q9NQV5 511 aa8.58□□□□□ -1.04
CNOT1-204ENST00000563130 ATRNO75882 1429 aa8.58□□□□□ -1.04
CNOT1-204ENST00000563130 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.58□□□□□ -1.04
CNOT1-204ENST00000563130 NWD2Q9ULI1 1742 aa8.58□□□□□ -1.04
CNOT1-204ENST00000563130 COL14A1Q05707 1796 aaKnown RBP8.58□□□□□ -1.04
CNOT1-204ENST00000563130 FYB1O15117 783 aa8.57□□□□□ -1.04
CNOT1-204ENST00000563130 ZC3H6P61129 1189 aaKnown RBP8.57□□□□□ -1.04
CNOT1-204ENST00000563130 PLCH1Q4KWH8 1693 aa8.57□□□□□ -1.04
CNOT1-204ENST00000563130 KCNH5Q8NCM2 988 aa8.57□□□□□ -1.04
CNOT1-204ENST00000563130 QTRT2Q9H974 415 aaKnown RBP8.57□□□□□ -1.04
CNOT1-204ENST00000563130 TRPC5Q9UL62 973 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-204ENST00000563130 NFAT5O94916 1531 aa8.57□□□□□ -1.04
CNOT1-204ENST00000563130 SP7Q8TDD2 431 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-204ENST00000563130 PHF12Q96QT6 1004 aa8.57□□□□□ -1.04
CNOT1-204ENST00000563130 ARHGEF25Q86VW2 580 aa8.56□□□□□ -1.04
CNOT1-204ENST00000563130 BTG4Q9NY30 223 aa8.56□□□□□ -1.04
CNOT1-204ENST00000563130 NRAPQ86VF7 1730 aa8.56□□□□□ -1.04
CNOT1-204ENST00000563130 LMO7Q8WWI1 1683 aa8.56□□□□□ -1.04
CNOT1-204ENST00000563130 NSD3Q9BZ95 1437 aa8.56□□□□□ -1.04
CNOT1-204ENST00000563130 AATKQ6ZMQ8 1374 aa8.56□□□□□ -1.04
CNOT1-204ENST00000563130 WASHC2AQ641Q2 1341 aa8.56□□□□□ -1.04
CNOT1-204ENST00000563130 RBM6P78332 1123 aaKnown RBP8.56□□□□□ -1.04
CNOT1-204ENST00000563130 CHRNA2Q15822 529 aa8.56□□□□□ -1.04
CNOT1-204ENST00000563130 VPS72Q15906 364 aa8.56□□□□□ -1.04
CNOT1-204ENST00000563130 CDK12Q9NYV4 1490 aaPredicted RBP8.56□□□□□ -1.04
CNOT1-204ENST00000563130 CAMTA1Q9Y6Y1 1673 aa8.55□□□□□ -1.04
CNOT1-204ENST00000563130 CHRM1P11229 460 aaPredicted RBP8.55□□□□□ -1.04
CNOT1-204ENST00000563130 RXRBP28702 533 aa8.55□□□□□ -1.04
CNOT1-204ENST00000563130 GJD4Q96KN9 370 aaPredicted RBP8.55□□□□□ -1.04
CNOT1-204ENST00000563130 POLR3GLQ9BT43 218 aa8.55□□□□□ -1.04
CNOT1-204ENST00000563130 PANK3Q9H999 370 aa8.55□□□□□ -1.04
CNOT1-204ENST00000563130 CCDC7Q96M83 1385 aa8.55□□□□□ -1.04
CNOT1-204ENST00000563130 ZEB1P37275 1124 aaPredicted RBP8.55□□□□□ -1.04
CNOT1-204ENST00000563130 COL18A1P39060 1754 aa8.55□□□□□ -1.04
CNOT1-204ENST00000563130 KIF12Q96FN5 646 aa8.54□□□□□ -1.04
CNOT1-204ENST00000563130 COG3Q96JB2 828 aa8.54□□□□□ -1.04
CNOT1-204ENST00000563130 GGNBP2Q9H3C7 697 aa8.54□□□□□ -1.04
CNOT1-204ENST00000563130 GLI3P10071 1580 aa8.54□□□□□ -1.04
CNOT1-204ENST00000563130 ABCC6O95255 1503 aa8.54□□□□□ -1.04
CNOT1-204ENST00000563130 PYGBP11216 843 aa8.54□□□□□ -1.04
CNOT1-204ENST00000563130 AXIN2Q9Y2T1 843 aa8.54□□□□□ -1.04
CNOT1-204ENST00000563130 COL5A2P05997 1499 aaPredicted RBP8.53□□□□□ -1.04
CNOT1-204ENST00000563130 ONECUT3O60422 494 aaPredicted RBP8.53□□□□□ -1.04
CNOT1-204ENST00000563130 CGNL1Q0VF96 1302 aa8.53□□□□□ -1.04
CNOT1-204ENST00000563130 SPATA31A5Q5VU36 1347 aa8.53□□□□□ -1.04
CNOT1-204ENST00000563130 SPATA31A7Q8IWB4 1347 aa8.53□□□□□ -1.04
CNOT1-204ENST00000563130 RGS12O14924 1447 aa8.52□□□□□ -1.04
CNOT1-204ENST00000563130 SOX12O15370 315 aa8.52□□□□□ -1.04
CNOT1-204ENST00000563130 PER1O15534 1290 aaPredicted RBP8.52□□□□□ -1.04
CNOT1-204ENST00000563130 KIF20BQ96Q89 1820 aa8.52□□□□□ -1.05
CNOT1-204ENST00000563130 SGIP1Q9BQI5 828 aa8.52□□□□□ -1.05
CNOT1-204ENST00000563130 FBLN1P23142 703 aa8.51□□□□□ -1.05
CNOT1-204ENST00000563130 MAP3K19Q56UN5 1328 aa8.51□□□□□ -1.05
CNOT1-204ENST00000563130 SPATA31A1Q5TZJ5 1347 aa8.51□□□□□ -1.05
CNOT1-204ENST00000563130 GABBR2O75899 941 aa8.51□□□□□ -1.05
CNOT1-204ENST00000563130 LARP1Q6PKG0 1096 aaKnown RBP8.51□□□□□ -1.05
CNOT1-204ENST00000563130 STRN4Q9NRL3 753 aa8.51□□□□□ -1.05
CNOT1-204ENST00000563130 NSD2O96028 1365 aa8.51□□□□□ -1.05
CNOT1-204ENST00000563130 LTN1O94822 1766 aa8.5□□□□□ -1.05
CNOT1-204ENST00000563130 ECM2O94769 699 aaPredicted RBP8.5□□□□□ -1.05
CNOT1-204ENST00000563130 WDR17Q8IZU2 1322 aa8.5□□□□□ -1.05
CNOT1-204ENST00000563130 ZBTB7CA1YPR0 619 aa8.5□□□□□ -1.05
CNOT1-204ENST00000563130 MAP3K13O43283 966 aa8.5□□□□□ -1.05
CNOT1-204ENST00000563130 EVA1CP58658 441 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms