RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 TSR2Q969E8 191 aaKnown RBP17.59■□□□□ 0.41
RABGGTA-220ENST00000560998 CLUAP1Q96AJ1 413 aa17.59■□□□□ 0.41
RABGGTA-220ENST00000560998 ZRANB1Q9UGI0 708 aa17.59■□□□□ 0.41
RABGGTA-220ENST00000560998 ESPNB1AK53 854 aa17.59■□□□□ 0.41
RABGGTA-220ENST00000560998 BCL2L13Q9BXK5 485 aa17.59■□□□□ 0.41
RABGGTA-220ENST00000560998 SLIT1O75093 1534 aa17.58■□□□□ 0.41
RABGGTA-220ENST00000560998 FER1L4A9Z1Z3 1794 aa17.58■□□□□ 0.41
RABGGTA-220ENST00000560998 MCM4P33991 863 aa17.58■□□□□ 0.4
RABGGTA-220ENST00000560998 SLKQ9H2G2 1235 aaPredicted RBP17.58■□□□□ 0.4
RABGGTA-220ENST00000560998 ARHGAP23Q9P227 1491 aa17.58■□□□□ 0.4
RABGGTA-220ENST00000560998 IGHDP01880 384 aa17.57■□□□□ 0.4
RABGGTA-220ENST00000560998 RLBP1P12271 317 aa17.57■□□□□ 0.4
RABGGTA-220ENST00000560998 AAMPQ13685 434 aa17.57■□□□□ 0.4
RABGGTA-220ENST00000560998 ZNF692Q9BU19 519 aaPredicted RBP17.57■□□□□ 0.4
RABGGTA-220ENST00000560998 EMILIN1Q9Y6C2 1016 aa17.57■□□□□ 0.4
RABGGTA-220ENST00000560998 PTPRUQ92729 1446 aa17.57■□□□□ 0.4
RABGGTA-220ENST00000560998 PRKAR2BP31323 418 aa17.57■□□□□ 0.4
RABGGTA-220ENST00000560998 EXOSC9Q06265 439 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-220ENST00000560998 COG3Q96JB2 828 aa17.57■□□□□ 0.4
RABGGTA-220ENST00000560998 TNNQ9UQP3 1299 aa17.57■□□□□ 0.4
RABGGTA-220ENST00000560998 IL13P35225 146 aa17.56■□□□□ 0.4
RABGGTA-220ENST00000560998 CALD1Q05682 793 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-220ENST00000560998 NRKQ7Z2Y5 1582 aa17.56■□□□□ 0.4
RABGGTA-220ENST00000560998 EID1Q9Y6B2 187 aa17.56■□□□□ 0.4
RABGGTA-220ENST00000560998 TBC1D32Q96NH3 1257 aa17.55■□□□□ 0.4
RABGGTA-220ENST00000560998 PANK2Q9BZ23 570 aa17.54■□□□□ 0.4
RABGGTA-220ENST00000560998 PODXL2Q9NZ53 605 aa17.54■□□□□ 0.4
RABGGTA-220ENST00000560998 SLC26A8Q96RN1 970 aa17.53■□□□□ 0.4
RABGGTA-220ENST00000560998 DDX11L8A8MPP1 907 aa17.53■□□□□ 0.4
RABGGTA-220ENST00000560998 ZKSCAN2Q63HK3 967 aa17.53■□□□□ 0.4
RABGGTA-220ENST00000560998 GRPEL1Q9HAV7 217 aa17.53■□□□□ 0.4
RABGGTA-220ENST00000560998 PLEKHG3A1L390 1219 aa17.52■□□□□ 0.4
RABGGTA-220ENST00000560998 HMOX1P09601 288 aa17.52■□□□□ 0.4
RABGGTA-220ENST00000560998 NFE2L2Q16236 605 aa17.52■□□□□ 0.4
RABGGTA-220ENST00000560998 CHMP5Q9NZZ3 219 aa17.52■□□□□ 0.4
RABGGTA-220ENST00000560998 TRAK2O60296 914 aa17.51■□□□□ 0.39
RABGGTA-220ENST00000560998 PHACTR3Q96KR7 559 aa17.51■□□□□ 0.39
RABGGTA-220ENST00000560998 TBC1D2Q9BYX2 928 aa17.51■□□□□ 0.39
RABGGTA-220ENST00000560998 SSH1Q8WYL5 1049 aa17.51■□□□□ 0.39
RABGGTA-220ENST00000560998 SMC4Q9NTJ3 1288 aa17.51■□□□□ 0.39
RABGGTA-220ENST00000560998 TBX22Q9Y458 520 aa17.51■□□□□ 0.39
RABGGTA-220ENST00000560998 ACEP12821 1306 aa17.51■□□□□ 0.39
RABGGTA-220ENST00000560998 TTC21BQ7Z4L5 1316 aa17.51■□□□□ 0.39
RABGGTA-220ENST00000560998 DIP2AQ14689 1571 aa17.5■□□□□ 0.39
RABGGTA-220ENST00000560998 TERF1P54274 439 aa17.5■□□□□ 0.39
RABGGTA-220ENST00000560998 MVPQ14764 893 aaKnown RBP17.5■□□□□ 0.39
RABGGTA-220ENST00000560998 RRS1Q15050 365 aaKnown RBP17.5■□□□□ 0.39
RABGGTA-220ENST00000560998 TRIM44Q96DX7 344 aaPredicted RBP17.5■□□□□ 0.39
RABGGTA-220ENST00000560998 PTCH1Q13635 1447 aa17.5■□□□□ 0.39
RABGGTA-220ENST00000560998 DZIP1LQ8IYY4 767 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-220ENST00000560998 PMFBP1Q8TBY8 1022 aa17.49■□□□□ 0.39
RABGGTA-220ENST00000560998 PCDHB15Q9Y5E8 787 aa17.49■□□□□ 0.39
RABGGTA-220ENST00000560998 USP6P35125 1406 aa17.49■□□□□ 0.39
RABGGTA-220ENST00000560998 MAP7D2Q96T17 732 aa17.49■□□□□ 0.39
RABGGTA-220ENST00000560998 AMOTL2Q9Y2J4 779 aa17.49■□□□□ 0.39
RABGGTA-220ENST00000560998 OVOS2A0A0J9YW53 1432 aa17.48■□□□□ 0.39
RABGGTA-220ENST00000560998 OVOS2Q6IE36 1432 aa17.48■□□□□ 0.39
RABGGTA-220ENST00000560998 NALCNQ8IZF0 1738 aa17.48■□□□□ 0.39
RABGGTA-220ENST00000560998 SEC24BO95487 1268 aa17.48■□□□□ 0.39
RABGGTA-220ENST00000560998 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
RABGGTA-220ENST00000560998 THEMISQ8N1K5 641 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-220ENST00000560998 DLG5Q8TDM6 1919 aa17.47■□□□□ 0.39
RABGGTA-220ENST00000560998 PTMSP20962 102 aa17.47■□□□□ 0.39
RABGGTA-220ENST00000560998 FTSJ3Q8IY81 847 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-220ENST00000560998 NUTM2FA1L443 756 aa17.46■□□□□ 0.39
RABGGTA-220ENST00000560998 TRIM27P14373 513 aa17.46■□□□□ 0.39
RABGGTA-220ENST00000560998 XRN1Q8IZH2 1706 aaKnown RBP17.46■□□□□ 0.39
RABGGTA-220ENST00000560998 SSH2Q76I76 1423 aa17.46■□□□□ 0.38
RABGGTA-220ENST00000560998 ERBB4Q15303 1308 aa17.45■□□□□ 0.38
RABGGTA-220ENST00000560998 ALDH1L2Q3SY69 923 aa17.45■□□□□ 0.38
RABGGTA-220ENST00000560998 ATF7IPQ6VMQ6 1270 aa17.45■□□□□ 0.38
RABGGTA-220ENST00000560998 NOB1Q9ULX3 412 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-220ENST00000560998 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
RABGGTA-220ENST00000560998 KIF16BQ96L93 1317 aa17.44■□□□□ 0.38
RABGGTA-220ENST00000560998 ARXQ96QS3 562 aa17.44■□□□□ 0.38
RABGGTA-220ENST00000560998 THUMPD2Q9BTF0 503 aaKnown RBP17.44■□□□□ 0.38
RABGGTA-220ENST00000560998 GZF1Q9H116 711 aaPredicted RBP17.44■□□□□ 0.38
RABGGTA-220ENST00000560998 RWDD1Q9H446 243 aaPredicted RBP17.44■□□□□ 0.38
RABGGTA-220ENST00000560998 PEAK1Q9H792 1746 aa17.43■□□□□ 0.38
RABGGTA-220ENST00000560998 ZNF428Q96B54 188 aa17.43■□□□□ 0.38
RABGGTA-220ENST00000560998 IFT57Q9NWB7 429 aa17.43■□□□□ 0.38
RABGGTA-220ENST00000560998 RGPD8O14715 1765 aaPredicted RBP17.43■□□□□ 0.38
RABGGTA-220ENST00000560998 RIMS1Q86UR5 1692 aaKnown RBP17.43■□□□□ 0.38
RABGGTA-220ENST00000560998 ZNF853P0CG23 659 aa17.42■□□□□ 0.38
RABGGTA-220ENST00000560998 LMOD3Q0VAK6 560 aa17.42■□□□□ 0.38
RABGGTA-220ENST00000560998 IPO8O15397 1037 aaKnown RBP17.42■□□□□ 0.38
RABGGTA-220ENST00000560998 GNAI1P63096 354 aa17.42■□□□□ 0.38
RABGGTA-220ENST00000560998 EIF4A2Q14240 407 aaKnown RBP17.42■□□□□ 0.38
RABGGTA-220ENST00000560998 DDX19BQ9UMR2 479 aa17.41■□□□□ 0.38
RABGGTA-220ENST00000560998 CEP170BQ9Y4F5 1589 aaPredicted RBP17.41■□□□□ 0.38
RABGGTA-220ENST00000560998 TTC21AQ8NDW8 1320 aa17.41■□□□□ 0.38
RABGGTA-220ENST00000560998 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
RABGGTA-220ENST00000560998 BRPF1P55201 1214 aaPredicted RBP17.4■□□□□ 0.38
RABGGTA-220ENST00000560998 SKOR2Q2VWA4 1001 aaPredicted RBP17.4■□□□□ 0.38
RABGGTA-220ENST00000560998 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.4■□□□□ 0.38
RABGGTA-220ENST00000560998 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
RABGGTA-220ENST00000560998 RGPD1P0DJD0 1748 aa17.4■□□□□ 0.38
RABGGTA-220ENST00000560998 CCDC173Q0VFZ6 552 aa17.4■□□□□ 0.38
RABGGTA-220ENST00000560998 KIAA1211Q6ZU35 1233 aa17.39■□□□□ 0.37
RABGGTA-220ENST00000560998 ITPRIPQ8IWB1 547 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms