RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
TPM1-227ENST00000560970 GCP02774 474 aa15.39■□□□□ 0.05
TPM1-227ENST00000560970 CAMKK2Q96RR4 588 aa15.39■□□□□ 0.05
TPM1-227ENST00000560970 ROCK2O75116 1388 aaKnown RBP15.38■□□□□ 0.05
TPM1-227ENST00000560970 APBA3O96018 575 aa15.38■□□□□ 0.05
TPM1-227ENST00000560970 EVC2Q86UK5 1308 aa15.38■□□□□ 0.05
TPM1-227ENST00000560970 MYOM1P52179 1685 aa15.36■□□□□ 0.05
TPM1-227ENST00000560970 TNS2Q63HR2 1409 aa15.35■□□□□ 0.05
TPM1-227ENST00000560970 C11orf95C9JLR9 678 aaPredicted RBP15.35■□□□□ 0.05
TPM1-227ENST00000560970 CABP1Q9NZU7 370 aa15.35■□□□□ 0.05
TPM1-227ENST00000560970 BTAF1O14981 1849 aa15.35■□□□□ 0.05
TPM1-227ENST00000560970 SBNO2Q9Y2G9 1366 aa15.35■□□□□ 0.05
TPM1-227ENST00000560970 ZBTB7CA1YPR0 619 aa15.34■□□□□ 0.05
TPM1-227ENST00000560970 NLRP6P59044 892 aa15.34■□□□□ 0.05
TPM1-227ENST00000560970 WDR17Q8IZU2 1322 aa15.34■□□□□ 0.05
TPM1-227ENST00000560970 BCL9O00512 1426 aa15.34■□□□□ 0.05
TPM1-227ENST00000560970 PAPPAQ13219 1627 aa15.33■□□□□ 0.04
TPM1-227ENST00000560970 TTC21AQ8NDW8 1320 aa15.33■□□□□ 0.04
TPM1-227ENST00000560970 QSER1Q2KHR3 1735 aa15.32■□□□□ 0.04
TPM1-227ENST00000560970 TONSLQ96HA7 1378 aa15.32■□□□□ 0.04
TPM1-227ENST00000560970 CD163L1Q9NR16 1453 aa15.31■□□□□ 0.04
TPM1-227ENST00000560970 DDB1Q16531 1140 aa15.3■□□□□ 0.04
TPM1-227ENST00000560970 NBPF14Q5TI25 921 aa15.3■□□□□ 0.04
TPM1-227ENST00000560970 TOM1L2Q6ZVM7 507 aa15.3■□□□□ 0.04
TPM1-227ENST00000560970 TTC21BQ7Z4L5 1316 aa15.3■□□□□ 0.04
TPM1-227ENST00000560970 KTN1Q86UP2 1357 aaKnown RBP15.3■□□□□ 0.04
TPM1-227ENST00000560970 DOT1LQ8TEK3 1739 aa15.3■□□□□ 0.04
TPM1-227ENST00000560970 SHANK3Q9BYB0 1731 aa15.3■□□□□ 0.04
TPM1-227ENST00000560970 CCDC7Q96M83 1385 aa15.29■□□□□ 0.04
TPM1-227ENST00000560970 KCNH5Q8NCM2 988 aa15.29■□□□□ 0.04
TPM1-227ENST00000560970 TUBGCP6Q96RT7 1819 aa15.29■□□□□ 0.04
TPM1-227ENST00000560970 NINLQ9Y2I6 1382 aa15.28■□□□□ 0.04
TPM1-227ENST00000560970 CDCA7Q9BWT1 371 aaPredicted RBP15.28■□□□□ 0.04
TPM1-227ENST00000560970 KIF20BQ96Q89 1820 aa15.28■□□□□ 0.04
TPM1-227ENST00000560970 RGPD2P0DJD1 1756 aa15.28■□□□□ 0.04
TPM1-227ENST00000560970 ARHGEF25Q86VW2 580 aa15.27■□□□□ 0.04
TPM1-227ENST00000560970 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.04
TPM1-227ENST00000560970 AXIN2Q9Y2T1 843 aa15.26■□□□□ 0.03
TPM1-227ENST00000560970 EDC4Q6P2E9 1401 aaKnown RBP15.26■□□□□ 0.03
TPM1-227ENST00000560970 USP31Q70CQ4 1352 aa15.25■□□□□ 0.03
TPM1-227ENST00000560970 SOX12O15370 315 aa15.25■□□□□ 0.03
TPM1-227ENST00000560970 CLSPNQ9HAW4 1339 aa15.24■□□□□ 0.03
TPM1-227ENST00000560970 LY75O60449 1722 aa15.24■□□□□ 0.03
TPM1-227ENST00000560970 CHD4Q14839 1912 aa15.24■□□□□ 0.03
TPM1-227ENST00000560970 PLSCR1O15162 318 aa15.24■□□□□ 0.03
TPM1-227ENST00000560970 CSB-PGBD3P0DP91 1061 aa15.24■□□□□ 0.03
TPM1-227ENST00000560970 CARD10Q9BWT7 1032 aa15.24■□□□□ 0.03
TPM1-227ENST00000560970 BCL11BQ9C0K0 894 aaPredicted RBP15.24■□□□□ 0.03
TPM1-227ENST00000560970 COL24A1Q17RW2 1714 aa15.23■□□□□ 0.03
TPM1-227ENST00000560970 SPON1Q9HCB6 807 aa15.23■□□□□ 0.03
TPM1-227ENST00000560970 ANO8Q9HCE9 1232 aaPredicted RBP15.23■□□□□ 0.03
TPM1-227ENST00000560970 ERBB3P21860 1342 aa15.22■□□□□ 0.03
TPM1-227ENST00000560970 KAT6BQ8WYB5 2073 aa15.22■□□□□ 0.03
TPM1-227ENST00000560970 MARCH10Q8NA82 808 aaPredicted RBP15.22■□□□□ 0.03
TPM1-227ENST00000560970 PPP1R1BQ9UD71 204 aaPredicted RBP15.22■□□□□ 0.03
TPM1-227ENST00000560970 KCNQ2O43526 872 aa15.21■□□□□ 0.03
TPM1-227ENST00000560970 A0A1W2PP64 1363 aa15.21■□□□□ 0.02
TPM1-227ENST00000560970 CCER1Q8TC90 406 aaPredicted RBP15.2■□□□□ 0.02
TPM1-227ENST00000560970 PTF1AQ7RTS3 328 aa15.19■□□□□ 0.02
TPM1-227ENST00000560970 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.18■□□□□ 0.02
TPM1-227ENST00000560970 CARD11Q9BXL7 1154 aa15.18■□□□□ 0.02
TPM1-227ENST00000560970 NME9Q86XW9 330 aa15.17■□□□□ 0.02
TPM1-227ENST00000560970 ANKRD26Q9UPS8 1709 aa15.17■□□□□ 0.02
TPM1-227ENST00000560970 EXOC5O00471 708 aa15.16■□□□□ 0.02
TPM1-227ENST00000560970 HDGFL2Q7Z4V5 671 aaPredicted RBP15.16■□□□□ 0.02
TPM1-227ENST00000560970 C5P01031 1676 aa15.16■□□□□ 0.02
TPM1-227ENST00000560970 TXNRD1Q16881 649 aa15.15■□□□□ 0.02
TPM1-227ENST00000560970 YY1P25490 414 aa15.14■□□□□ 0.01
TPM1-227ENST00000560970 TMC1Q8TDI8 760 aa15.14■□□□□ 0.01
TPM1-227ENST00000560970 STK32BQ9NY57 414 aa15.14■□□□□ 0.01
TPM1-227ENST00000560970 TAF1LQ8IZX4 1826 aa15.13■□□□□ 0.01
TPM1-227ENST00000560970 IL2RBP14784 551 aa15.13■□□□□ 0.01
TPM1-227ENST00000560970 PKD1L3Q7Z443 1732 aa15.13■□□□□ 0.01
TPM1-227ENST00000560970 PROM2Q8N271 834 aa15.13■□□□□ 0.01
TPM1-227ENST00000560970 NLRP2Q9NX02 1062 aa15.13■□□□□ 0.01
TPM1-227ENST00000560970 TERF2IPQ9NYB0 399 aa15.13■□□□□ 0.01
TPM1-227ENST00000560970 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
TPM1-227ENST00000560970 ANKRD24Q8TF21 1146 aa15.12■□□□□ 0.01
TPM1-227ENST00000560970 PDGFDQ9GZP0 370 aaPredicted RBP15.12■□□□□ 0.01
TPM1-227ENST00000560970 TOGARAM1Q9Y4F4 1720 aa15.12■□□□□ 0.01
TPM1-227ENST00000560970 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
TPM1-227ENST00000560970 ZBTB7AO95365 584 aa15.11■□□□□ 0.01
TPM1-227ENST00000560970 SLC15A2Q16348 729 aa15.11■□□□□ 0.01
TPM1-227ENST00000560970 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
TPM1-227ENST00000560970 ITGB4P16144 1822 aa15.1■□□□□ 0.01
TPM1-227ENST00000560970 PTGER2P43116 358 aa15.1■□□□□ 0.01
TPM1-227ENST00000560970 PUS7Q96PZ0 661 aaKnown RBP15.1■□□□□ 0.01
TPM1-227ENST00000560970 SLC12A5Q9H2X9 1139 aa15.1■□□□□ 0.01
TPM1-227ENST00000560970 MEGF6O75095 1541 aa15.1■□□□□ 0.01
TPM1-227ENST00000560970 ANKRD36BQ8N2N9 1353 aa15.1■□□□□ 0.01
TPM1-227ENST00000560970 UTRNP46939 3433 aa15.1■□□□□ 0.01
TPM1-227ENST00000560970 ACSBG1Q96GR2 724 aa15.09■□□□□ 0.01
TPM1-227ENST00000560970 MTFR1LQ9H019 292 aa15.08■□□□□ 0
TPM1-227ENST00000560970 MAP3K5Q99683 1374 aa15.08■□□□□ 0
TPM1-227ENST00000560970 USP47Q96K76 1375 aa15.07■□□□□ 0
TPM1-227ENST00000560970 SMG6Q86US8 1419 aaKnown RBP15.07■□□□□ 0
TPM1-227ENST00000560970 IP6K1Q92551 441 aa15.06■□□□□ 0
TPM1-227ENST00000560970 TESK2Q96S53 571 aa15.05■□□□□ -0
TPM1-227ENST00000560970 ATF5Q9Y2D1 282 aaPredicted RBP15.05■□□□□ -0
TPM1-227ENST00000560970 NSD2O96028 1365 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms