RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.36■□□□□ 0.21
RABGGTA-218ENST00000560777 RRS1Q15050 365 aaKnown RBP16.36■□□□□ 0.21
RABGGTA-218ENST00000560777 LARP1Q6PKG0 1096 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-218ENST00000560777 IP6K1Q92551 441 aa16.35■□□□□ 0.21
RABGGTA-218ENST00000560777 CCDC9Q9Y3X0 531 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-218ENST00000560777 NRAPQ86VF7 1730 aa16.35■□□□□ 0.21
RABGGTA-218ENST00000560777 NSD2O96028 1365 aa16.35■□□□□ 0.21
RABGGTA-218ENST00000560777 SPATA31A5Q5VU36 1347 aa16.34■□□□□ 0.21
RABGGTA-218ENST00000560777 SPATA31A7Q8IWB4 1347 aa16.34■□□□□ 0.21
RABGGTA-218ENST00000560777 HOXC9P31274 260 aa16.33■□□□□ 0.2
RABGGTA-218ENST00000560777 TNNT2P45379 298 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-218ENST00000560777 AMPHP49418 695 aa16.33■□□□□ 0.2
RABGGTA-218ENST00000560777 MORC1Q86VD1 984 aa16.33■□□□□ 0.2
RABGGTA-218ENST00000560777 COL5A2P05997 1499 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-218ENST00000560777 ONECUT3O60422 494 aaPredicted RBP16.32■□□□□ 0.2
RABGGTA-218ENST00000560777 LTN1O94822 1766 aa16.32■□□□□ 0.2
RABGGTA-218ENST00000560777 DDX10Q13206 875 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-218ENST00000560777 CC2D1BQ5T0F9 858 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-218ENST00000560777 SPATA31A1Q5TZJ5 1347 aa16.32■□□□□ 0.2
RABGGTA-218ENST00000560777 POLKQ9UBT6 870 aa16.32■□□□□ 0.2
RABGGTA-218ENST00000560777 RGPD5Q99666 1765 aa16.31■□□□□ 0.2
RABGGTA-218ENST00000560777 EMILIN1Q9Y6C2 1016 aa16.31■□□□□ 0.2
RABGGTA-218ENST00000560777 GLI3P10071 1580 aa16.3■□□□□ 0.2
RABGGTA-218ENST00000560777 ABCC6O95255 1503 aa16.3■□□□□ 0.2
RABGGTA-218ENST00000560777 NPC1L1Q9UHC9 1359 aa16.3■□□□□ 0.2
RABGGTA-218ENST00000560777 WDR17Q8IZU2 1322 aa16.3■□□□□ 0.2
RABGGTA-218ENST00000560777 ZNF316A6NFI3 1004 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-218ENST00000560777 USP35Q9P2H5 1018 aa16.3■□□□□ 0.2
RABGGTA-218ENST00000560777 ANKRD26Q9UPS8 1709 aa16.3■□□□□ 0.2
RABGGTA-218ENST00000560777 CSB-PGBD3P0DP91 1061 aa16.29■□□□□ 0.2
RABGGTA-218ENST00000560777 CNGB1Q14028 1251 aaPredicted RBP16.29■□□□□ 0.2
RABGGTA-218ENST00000560777 HSP90AB2PQ58FF8 381 aa16.29■□□□□ 0.2
RABGGTA-218ENST00000560777 TOM1L2Q6ZVM7 507 aa16.29■□□□□ 0.2
RABGGTA-218ENST00000560777 ANKRD24Q8TF21 1146 aa16.29■□□□□ 0.2
RABGGTA-218ENST00000560777 CDK12Q9NYV4 1490 aaPredicted RBP16.29■□□□□ 0.2
RABGGTA-218ENST00000560777 BLMP54132 1417 aaPredicted RBP16.28■□□□□ 0.2
RABGGTA-218ENST00000560777 ERBB3P21860 1342 aa16.28■□□□□ 0.2
RABGGTA-218ENST00000560777 PPM1GO15355 546 aaPredicted RBP16.28■□□□□ 0.2
RABGGTA-218ENST00000560777 FAM98CQ17RN3 349 aaKnown RBP16.28■□□□□ 0.2
RABGGTA-218ENST00000560777 CRB1P82279 1406 aa16.28■□□□□ 0.2
RABGGTA-218ENST00000560777 RTL1A6NKG5 1358 aa16.27■□□□□ 0.2
RABGGTA-218ENST00000560777 KIF24Q5T7B8 1368 aa16.27■□□□□ 0.2
RABGGTA-218ENST00000560777 MAP2P11137 1827 aaKnown RBP16.27■□□□□ 0.2
RABGGTA-218ENST00000560777 TCP11L2Q8N4U5 519 aa16.27■□□□□ 0.2
RABGGTA-218ENST00000560777 LTV1Q96GA3 475 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-218ENST00000560777 CARD10Q9BWT7 1032 aa16.27■□□□□ 0.2
RABGGTA-218ENST00000560777 RGS12O14924 1447 aa16.27■□□□□ 0.19
RABGGTA-218ENST00000560777 FLT4P35916 1363 aa16.26■□□□□ 0.19
RABGGTA-218ENST00000560777 PEAK1Q9H792 1746 aa16.26■□□□□ 0.19
RABGGTA-218ENST00000560777 BARGINQ6ZT62 677 aa16.26■□□□□ 0.19
RABGGTA-218ENST00000560777 SEPT12Q8IYM1 358 aa16.26■□□□□ 0.19
RABGGTA-218ENST00000560777 THRAP3Q9Y2W1 955 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-218ENST00000560777 INSRP06213 1382 aa16.26■□□□□ 0.19
RABGGTA-218ENST00000560777 NLRP2Q9NX02 1062 aa16.25■□□□□ 0.19
RABGGTA-218ENST00000560777 MTHFSP49914 203 aa16.22■□□□□ 0.19
RABGGTA-218ENST00000560777 NBPF6Q5VWK0 638 aa16.22■□□□□ 0.19
RABGGTA-218ENST00000560777 NBPF4Q96M43 638 aa16.22■□□□□ 0.19
RABGGTA-218ENST00000560777 A0A0G2JS52 829 aa16.21■□□□□ 0.19
RABGGTA-218ENST00000560777 MYT1Q01538 1121 aa16.21■□□□□ 0.19
RABGGTA-218ENST00000560777 SMG6Q86US8 1419 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-218ENST00000560777 EIF4A2Q14240 407 aaKnown RBP16.19■□□□□ 0.18
RABGGTA-218ENST00000560777 THSD7AQ9UPZ6 1657 aa16.18■□□□□ 0.18
RABGGTA-218ENST00000560777 KRT27Q7Z3Y8 459 aa16.18■□□□□ 0.18
RABGGTA-218ENST00000560777 CDCA7Q9BWT1 371 aaPredicted RBP16.18■□□□□ 0.18
RABGGTA-218ENST00000560777 PPP2R1AP30153 589 aa16.17■□□□□ 0.18
RABGGTA-218ENST00000560777 USHBP1Q8N6Y0 703 aa16.17■□□□□ 0.18
RABGGTA-218ENST00000560777 EYA1Q99502 592 aa16.17■□□□□ 0.18
RABGGTA-218ENST00000560777 RGPD2P0DJD1 1756 aa16.17■□□□□ 0.18
RABGGTA-218ENST00000560777 DISP2A7MBM2 1401 aa16.17■□□□□ 0.18
RABGGTA-218ENST00000560777 BRWD3Q6RI45 1802 aa16.17■□□□□ 0.18
RABGGTA-218ENST00000560777 IL2RBP14784 551 aa16.16■□□□□ 0.18
RABGGTA-218ENST00000560777 PARD3Q8TEW0 1356 aa16.15■□□□□ 0.18
RABGGTA-218ENST00000560777 SOCS7O14512 581 aa16.15■□□□□ 0.18
RABGGTA-218ENST00000560777 IL13P35225 146 aa16.15■□□□□ 0.18
RABGGTA-218ENST00000560777 DDB1Q16531 1140 aa16.15■□□□□ 0.18
RABGGTA-218ENST00000560777 FAM208AQ9UK61 1670 aaKnown RBP16.14■□□□□ 0.18
RABGGTA-218ENST00000560777 EXOC5O00471 708 aa16.14■□□□□ 0.17
RABGGTA-218ENST00000560777 PDE3BQ13370 1112 aa16.14■□□□□ 0.17
RABGGTA-218ENST00000560777 RALBP1Q15311 655 aa16.14■□□□□ 0.17
RABGGTA-218ENST00000560777 FAM182BQ5T319 152 aa16.14■□□□□ 0.17
RABGGTA-218ENST00000560777 PARP4Q9UKK3 1724 aaKnown RBP16.12■□□□□ 0.17
RABGGTA-218ENST00000560777 NCAPD2Q15021 1401 aa16.11■□□□□ 0.17
RABGGTA-218ENST00000560777 DIAPH1O60610 1272 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-218ENST00000560777 MARCH10Q8NA82 808 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-218ENST00000560777 RAPGEF4Q8WZA2 1011 aa16.11■□□□□ 0.17
RABGGTA-218ENST00000560777 IGSF1Q8N6C5 1336 aa16.11■□□□□ 0.17
RABGGTA-218ENST00000560777 WNK3Q9BYP7 1800 aa16.1■□□□□ 0.17
RABGGTA-218ENST00000560777 UPF1Q92900 1129 aaKnown RBP eCLIP16.1■□□□□ 0.17
RABGGTA-218ENST00000560777 MEGF6O75095 1541 aa16.09■□□□□ 0.17
RABGGTA-218ENST00000560777 TATP17735 454 aaPredicted RBP16.09■□□□□ 0.17
RABGGTA-218ENST00000560777 FAM196AQ6ZSG2 479 aa16.09■□□□□ 0.17
RABGGTA-218ENST00000560777 ZCRB1Q8TBF4 217 aaKnown RBP16.09■□□□□ 0.17
RABGGTA-218ENST00000560777 PRKRIP1Q9H875 184 aaPredicted RBP16.09■□□□□ 0.17
RABGGTA-218ENST00000560777 EP400Q96L91 3159 aa16.09■□□□□ 0.17
RABGGTA-218ENST00000560777 LRRC37A3O60309 1634 aa16.08■□□□□ 0.17
RABGGTA-218ENST00000560777 AEBP1Q8IUX7 1158 aa16.08■□□□□ 0.16
RABGGTA-218ENST00000560777 CFAP53Q96M91 514 aa16.08■□□□□ 0.16
RABGGTA-218ENST00000560777 COL3A1P02461 1466 aaPredicted RBP16.08■□□□□ 0.16
RABGGTA-218ENST00000560777 SULT6B1Q6IMI4 303 aa16.07■□□□□ 0.16
RABGGTA-218ENST00000560777 OVOS2A0A0G2JMS6 1433 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms