RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 KIAA0232Q92628 1395 aa13.96□□□□□ -0.18
TPM1-221ENST00000559831 HSP90AB2PQ58FF8 381 aa13.95□□□□□ -0.18
TPM1-221ENST00000559831 KIF24Q5T7B8 1368 aa13.95□□□□□ -0.18
TPM1-221ENST00000559831 JCADQ9P266 1359 aa13.95□□□□□ -0.18
TPM1-221ENST00000559831 RGPD2P0DJD1 1756 aa13.94□□□□□ -0.18
TPM1-221ENST00000559831 NUTM2BA6NNL0 878 aaPredicted RBP13.94□□□□□ -0.18
TPM1-221ENST00000559831 NUTM2EB1AL46 878 aaPredicted RBP13.94□□□□□ -0.18
TPM1-221ENST00000559831 U2SURPO15042 1029 aaKnown RBP13.94□□□□□ -0.18
TPM1-221ENST00000559831 CHRNA2Q15822 529 aa13.94□□□□□ -0.18
TPM1-221ENST00000559831 NUTM2AQ8IVF1 878 aaPredicted RBP13.94□□□□□ -0.18
TPM1-221ENST00000559831 IP6K1Q92551 441 aa13.94□□□□□ -0.18
TPM1-221ENST00000559831 LTV1Q96GA3 475 aaPredicted RBP13.94□□□□□ -0.18
TPM1-221ENST00000559831 NUDCQ9Y266 331 aa13.94□□□□□ -0.18
TPM1-221ENST00000559831 INSRP06213 1382 aa13.94□□□□□ -0.18
TPM1-221ENST00000559831 YTHDC1Q96MU7 727 aaKnown RBP13.93□□□□□ -0.18
TPM1-221ENST00000559831 PRDM11Q9NQV5 511 aa13.93□□□□□ -0.18
TPM1-221ENST00000559831 CPDO75976 1380 aa13.93□□□□□ -0.18
TPM1-221ENST00000559831 COL14A1Q05707 1796 aaKnown RBP13.92□□□□□ -0.18
TPM1-221ENST00000559831 ABCC6O95255 1503 aa13.92□□□□□ -0.18
TPM1-221ENST00000559831 EIF4A2Q14240 407 aaKnown RBP13.92□□□□□ -0.18
TPM1-221ENST00000559831 BLMP54132 1417 aaPredicted RBP13.91□□□□□ -0.18
TPM1-221ENST00000559831 RGPD1P0DJD0 1748 aa13.91□□□□□ -0.18
TPM1-221ENST00000559831 ADAMTS2O95450 1211 aa13.91□□□□□ -0.18
TPM1-221ENST00000559831 U2AF1L5P0DN76 240 aaPredicted RBP13.91□□□□□ -0.18
TPM1-221ENST00000559831 IL13P35225 146 aa13.91□□□□□ -0.18
TPM1-221ENST00000559831 U2AF1Q01081 240 aaKnown RBP eCLIP13.91□□□□□ -0.186e-9■■■■□ 21.7
TPM1-221ENST00000559831 ADAMTS8Q9UP79 889 aa13.91□□□□□ -0.18
TPM1-221ENST00000559831 LMO7Q8WWI1 1683 aa13.91□□□□□ -0.18
TPM1-221ENST00000559831 PLCH1Q4KWH8 1693 aa13.9□□□□□ -0.18
TPM1-221ENST00000559831 FAM208AQ9UK61 1670 aaKnown RBP13.89□□□□□ -0.19
TPM1-221ENST00000559831 ANKRD24Q8TF21 1146 aa13.89□□□□□ -0.19
TPM1-221ENST00000559831 AXIN2Q9Y2T1 843 aa13.89□□□□□ -0.19
TPM1-221ENST00000559831 HMOX1P09601 288 aa13.88□□□□□ -0.19
TPM1-221ENST00000559831 CSB-PGBD3P0DP91 1061 aa13.88□□□□□ -0.19
TPM1-221ENST00000559831 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
TPM1-221ENST00000559831 CAMTA1Q9Y6Y1 1673 aa13.88□□□□□ -0.19
TPM1-221ENST00000559831 FAM83GA6ND36 823 aa13.87□□□□□ -0.19
TPM1-221ENST00000559831 SPATA31A6Q5VVP1 1343 aa13.87□□□□□ -0.19
TPM1-221ENST00000559831 SENP3-EIF4A1A0A087X0R7 540 aa13.86□□□□□ -0.19
TPM1-221ENST00000559831 LRP6O75581 1613 aa13.86□□□□□ -0.19
TPM1-221ENST00000559831 SULT6B1Q6IMI4 303 aa13.85□□□□□ -0.19
TPM1-221ENST00000559831 USHBP1Q8N6Y0 703 aa13.85□□□□□ -0.19
TPM1-221ENST00000559831 EYA1Q99502 592 aa13.85□□□□□ -0.19
TPM1-221ENST00000559831 STRN4Q9NRL3 753 aa13.85□□□□□ -0.19
TPM1-221ENST00000559831 BTG4Q9NY30 223 aa13.85□□□□□ -0.19
TPM1-221ENST00000559831 COL5A2P05997 1499 aaPredicted RBP13.85□□□□□ -0.19
TPM1-221ENST00000559831 ERBB3P21860 1342 aa13.85□□□□□ -0.19
TPM1-221ENST00000559831 NRAPQ86VF7 1730 aa13.84□□□□□ -0.19
TPM1-221ENST00000559831 NWD2Q9ULI1 1742 aa13.84□□□□□ -0.19
TPM1-221ENST00000559831 EVA1CP58658 441 aa13.84□□□□□ -0.19
TPM1-221ENST00000559831 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
TPM1-221ENST00000559831 MEX3CQ5U5Q3 659 aaKnown RBP13.84□□□□□ -0.19
TPM1-221ENST00000559831 AEBP1Q8IUX7 1158 aa13.84□□□□□ -0.19
TPM1-221ENST00000559831 NLRP2Q9NX02 1062 aa13.84□□□□□ -0.19
TPM1-221ENST00000559831 IGSF1Q8N6C5 1336 aa13.84□□□□□ -0.19
TPM1-221ENST00000559831 PRKAR2BP31323 418 aa13.83□□□□□ -0.2
TPM1-221ENST00000559831 NBPF6Q5VWK0 638 aa13.83□□□□□ -0.2
TPM1-221ENST00000559831 NBPF4Q96M43 638 aa13.83□□□□□ -0.2
TPM1-221ENST00000559831 C8orf37Q96NL8 207 aa13.83□□□□□ -0.2
TPM1-221ENST00000559831 RSPH6AQ9H0K4 717 aa13.83□□□□□ -0.2
TPM1-221ENST00000559831 PNNQ9H307 717 aaKnown RBP13.83□□□□□ -0.2
TPM1-221ENST00000559831 FCHSD2O94868 740 aa13.82□□□□□ -0.2
TPM1-221ENST00000559831 NEFMP07197 916 aa13.82□□□□□ -0.2
TPM1-221ENST00000559831 RUNDC1Q96C34 613 aa13.82□□□□□ -0.2
TPM1-221ENST00000559831 MAPK8IP3Q9UPT6 1336 aa13.82□□□□□ -0.2
TPM1-221ENST00000559831 TOM1L2Q6ZVM7 507 aa13.81□□□□□ -0.2
TPM1-221ENST00000559831 NGLY1Q96IV0 654 aa13.81□□□□□ -0.2
TPM1-221ENST00000559831 DLG5Q8TDM6 1919 aa13.81□□□□□ -0.2
TPM1-221ENST00000559831 WDR17Q8IZU2 1322 aa13.81□□□□□ -0.2
TPM1-221ENST00000559831 APAF1O14727 1248 aa13.8□□□□□ -0.2
TPM1-221ENST00000559831 LARP1Q6PKG0 1096 aaKnown RBP13.8□□□□□ -0.2
TPM1-221ENST00000559831 PLEKHF1Q96S99 279 aa13.8□□□□□ -0.2
TPM1-221ENST00000559831 SALL2Q9Y467 1007 aaPredicted RBP13.8□□□□□ -0.2
TPM1-221ENST00000559831 KDRP35968 1356 aa13.8□□□□□ -0.2
TPM1-221ENST00000559831 SLIT2O94813 1529 aa13.8□□□□□ -0.2
TPM1-221ENST00000559831 TCP11L2Q8N4U5 519 aa13.78□□□□□ -0.2
TPM1-221ENST00000559831 RRP7AQ9Y3A4 280 aaKnown RBP13.78□□□□□ -0.2
TPM1-221ENST00000559831 CRB1P82279 1406 aa13.78□□□□□ -0.2
TPM1-221ENST00000559831 NCAPD2Q15021 1401 aa13.78□□□□□ -0.2
TPM1-221ENST00000559831 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.78□□□□□ -0.2
TPM1-221ENST00000559831 PARP4Q9UKK3 1724 aaKnown RBP13.78□□□□□ -0.2
TPM1-221ENST00000559831 WNK3Q9BYP7 1800 aa13.78□□□□□ -0.2
TPM1-221ENST00000559831 NEUROD2Q15784 382 aa13.77□□□□□ -0.21
TPM1-221ENST00000559831 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
TPM1-221ENST00000559831 USP35Q9P2H5 1018 aa13.77□□□□□ -0.21
TPM1-221ENST00000559831 CARD10Q9BWT7 1032 aa13.76□□□□□ -0.21
TPM1-221ENST00000559831 CCDC9Q9Y3X0 531 aaKnown RBP13.76□□□□□ -0.21
TPM1-221ENST00000559831 UNC5CLQ8IV45 518 aa13.75□□□□□ -0.21
TPM1-221ENST00000559831 RAPGEF4Q8WZA2 1011 aa13.75□□□□□ -0.21
TPM1-221ENST00000559831 USP21Q9UK80 565 aa13.75□□□□□ -0.21
TPM1-221ENST00000559831 VIRMAQ69YN4 1812 aaKnown RBP13.75□□□□□ -0.21
TPM1-221ENST00000559831 MEGF6O75095 1541 aa13.74□□□□□ -0.21
TPM1-221ENST00000559831 AFF2P51816 1311 aa13.74□□□□□ -0.21
TPM1-221ENST00000559831 TATP17735 454 aaPredicted RBP13.74□□□□□ -0.21
TPM1-221ENST00000559831 TMPOP42166 694 aaKnown RBP13.74□□□□□ -0.21
TPM1-221ENST00000559831 NFE2L2Q16236 605 aa13.74□□□□□ -0.21
TPM1-221ENST00000559831 BCL9LQ86UU0 1499 aa13.74□□□□□ -0.21
TPM1-221ENST00000559831 PKD1L3Q7Z443 1732 aa13.73□□□□□ -0.21
TPM1-221ENST00000559831 ZBED9Q6R2W3 1325 aa13.73□□□□□ -0.21
TPM1-221ENST00000559831 RIPK4P57078 832 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms