RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 STRN4Q9NRL3 753 aa15.78■□□□□ 0.12
BMP4-204ENST00000558961 TNS1Q9HBL0 1735 aaKnown RBP15.77■□□□□ 0.12
BMP4-204ENST00000558961 LRRC37A3O60309 1634 aa15.77■□□□□ 0.12
BMP4-204ENST00000558961 KIF20BQ96Q89 1820 aa15.77■□□□□ 0.11
BMP4-204ENST00000558961 LARP1Q6PKG0 1096 aaKnown RBP15.76■□□□□ 0.11
BMP4-204ENST00000558961 NME9Q86XW9 330 aa15.76■□□□□ 0.11
BMP4-204ENST00000558961 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.75■□□□□ 0.11
BMP4-204ENST00000558961 THRAP3Q9Y2W1 955 aaKnown RBP15.75■□□□□ 0.11
BMP4-204ENST00000558961 FAM208AQ9UK61 1670 aaKnown RBP15.74■□□□□ 0.11
BMP4-204ENST00000558961 EVA1CP58658 441 aa15.74■□□□□ 0.11
BMP4-204ENST00000558961 CDCA8Q53HL2 280 aa15.74■□□□□ 0.11
BMP4-204ENST00000558961 ZRANB1Q9UGI0 708 aa15.74■□□□□ 0.11
BMP4-204ENST00000558961 PEAK1Q9H792 1746 aa15.74■□□□□ 0.11
BMP4-204ENST00000558961 WDR17Q8IZU2 1322 aa15.73■□□□□ 0.11
BMP4-204ENST00000558961 TCP11L2Q8N4U5 519 aa15.73■□□□□ 0.11
BMP4-204ENST00000558961 AXIN2Q9Y2T1 843 aa15.73■□□□□ 0.11
BMP4-204ENST00000558961 A0A0G2JS52 829 aa15.72■□□□□ 0.11
BMP4-204ENST00000558961 MYT1Q01538 1121 aa15.72■□□□□ 0.11
BMP4-204ENST00000558961 DISP2A7MBM2 1401 aa15.7■□□□□ 0.1
BMP4-204ENST00000558961 USP35Q9P2H5 1018 aa15.7■□□□□ 0.1
BMP4-204ENST00000558961 SOX12O15370 315 aa15.69■□□□□ 0.1
BMP4-204ENST00000558961 ERBB3P21860 1342 aa15.68■□□□□ 0.1
BMP4-204ENST00000558961 ANKRD26Q9UPS8 1709 aa15.68■□□□□ 0.1
BMP4-204ENST00000558961 SBF2Q86WG5 1849 aa15.68■□□□□ 0.1
BMP4-204ENST00000558961 ZBTB7CA1YPR0 619 aa15.68■□□□□ 0.1
BMP4-204ENST00000558961 CCDC7Q96M83 1385 aa15.67■□□□□ 0.1
BMP4-204ENST00000558961 EIF4G2P78344 907 aaKnown RBP eCLIP15.67■□□□□ 0.1
BMP4-204ENST00000558961 CARD10Q9BWT7 1032 aa15.67■□□□□ 0.1
BMP4-204ENST00000558961 TOM1L2Q6ZVM7 507 aa15.66■□□□□ 0.1
BMP4-204ENST00000558961 RGPD3A6NKT7 1758 aaPredicted RBP15.66■□□□□ 0.1
BMP4-204ENST00000558961 RGPD4Q7Z3J3 1758 aa15.66■□□□□ 0.1
BMP4-204ENST00000558961 RTL1A6NKG5 1358 aa15.65■□□□□ 0.1
BMP4-204ENST00000558961 RREB1Q92766 1687 aa15.65■□□□□ 0.1
BMP4-204ENST00000558961 FYB1O15117 783 aa15.65■□□□□ 0.1
BMP4-204ENST00000558961 FAM182BQ5T319 152 aa15.65■□□□□ 0.1
BMP4-204ENST00000558961 FAM196AQ6ZSG2 479 aa15.65■□□□□ 0.1
BMP4-204ENST00000558961 COG3Q96JB2 828 aa15.65■□□□□ 0.1
BMP4-204ENST00000558961 NSD3Q9BZ95 1437 aa15.65■□□□□ 0.1
BMP4-204ENST00000558961 OVOS2A0A0G2JMS6 1433 aa15.64■□□□□ 0.09
BMP4-204ENST00000558961 BCL9O00512 1426 aa15.64■□□□□ 0.09
BMP4-204ENST00000558961 HSPA5P11021 654 aaKnown RBP15.64■□□□□ 0.09
BMP4-204ENST00000558961 SF3B2Q13435 895 aaKnown RBP15.64■□□□□ 0.09
BMP4-204ENST00000558961 TNS2Q63HR2 1409 aa15.64■□□□□ 0.09
BMP4-204ENST00000558961 CDCA7Q9BWT1 371 aaPredicted RBP15.64■□□□□ 0.09
BMP4-204ENST00000558961 RGPD2P0DJD1 1756 aa15.63■□□□□ 0.09
BMP4-204ENST00000558961 PDE3BQ13370 1112 aa15.63■□□□□ 0.09
BMP4-204ENST00000558961 CARD14Q9BXL6 1004 aa15.63■□□□□ 0.09
BMP4-204ENST00000558961 MAP3K19Q56UN5 1328 aa15.63■□□□□ 0.09
BMP4-204ENST00000558961 C11orf95C9JLR9 678 aaPredicted RBP15.62■□□□□ 0.09
BMP4-204ENST00000558961 DEFB132Q7Z7B7 95 aa15.62■□□□□ 0.09
BMP4-204ENST00000558961 IP6K1Q92551 441 aa15.62■□□□□ 0.09
BMP4-204ENST00000558961 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
BMP4-204ENST00000558961 CSB-PGBD3P0DP91 1061 aa15.61■□□□□ 0.09
BMP4-204ENST00000558961 BAG6P46379 1132 aa15.61■□□□□ 0.09
BMP4-204ENST00000558961 NUP188Q5SRE5 1749 aa15.6■□□□□ 0.09
BMP4-204ENST00000558961 DDB1Q16531 1140 aa15.6■□□□□ 0.09
BMP4-204ENST00000558961 ANKRD24Q8TF21 1146 aa15.6■□□□□ 0.09
BMP4-204ENST00000558961 GGNBP2Q9H3C7 697 aa15.6■□□□□ 0.09
BMP4-204ENST00000558961 PARD3Q8TEW0 1356 aa15.6■□□□□ 0.09
BMP4-204ENST00000558961 HOXC9P31274 260 aa15.59■□□□□ 0.09
BMP4-204ENST00000558961 NHSQ6T4R5 1651 aa15.59■□□□□ 0.09
BMP4-204ENST00000558961 SHANK3Q9BYB0 1731 aa15.59■□□□□ 0.09
BMP4-204ENST00000558961 MAP2P11137 1827 aaKnown RBP15.57■□□□□ 0.08
BMP4-204ENST00000558961 TRIM37O94972 964 aa15.57■□□□□ 0.08
BMP4-204ENST00000558961 CGNL1Q0VF96 1302 aa15.57■□□□□ 0.08
BMP4-204ENST00000558961 FBLN1P23142 703 aa15.56■□□□□ 0.08
BMP4-204ENST00000558961 FLT4P35916 1363 aa15.56■□□□□ 0.08
BMP4-204ENST00000558961 INSRP06213 1382 aa15.55■□□□□ 0.08
BMP4-204ENST00000558961 IL2RBP14784 551 aa15.55■□□□□ 0.08
BMP4-204ENST00000558961 MARCH10Q8NA82 808 aaPredicted RBP15.55■□□□□ 0.08
BMP4-204ENST00000558961 NLRP2Q9NX02 1062 aa15.55■□□□□ 0.08
BMP4-204ENST00000558961 AMPHP49418 695 aa15.54■□□□□ 0.08
BMP4-204ENST00000558961 EN1Q05925 392 aaPredicted RBP15.54■□□□□ 0.08
BMP4-204ENST00000558961 RRS1Q15050 365 aaKnown RBP15.54■□□□□ 0.08
BMP4-204ENST00000558961 CAMKK2Q96RR4 588 aa15.54■□□□□ 0.08
BMP4-204ENST00000558961 LRP5O75197 1615 aa15.54■□□□□ 0.08
BMP4-204ENST00000558961 NCAPD2Q15021 1401 aa15.53■□□□□ 0.08
BMP4-204ENST00000558961 SMG6Q86US8 1419 aaKnown RBP15.53■□□□□ 0.08
BMP4-204ENST00000558961 NSD2O96028 1365 aa15.53■□□□□ 0.08
BMP4-204ENST00000558961 EXOC5O00471 708 aa15.53■□□□□ 0.08
BMP4-204ENST00000558961 MEGF6O75095 1541 aa15.52■□□□□ 0.07
BMP4-204ENST00000558961 PKD1L3Q7Z443 1732 aa15.51■□□□□ 0.07
BMP4-204ENST00000558961 APBA3O96018 575 aa15.51■□□□□ 0.07
BMP4-204ENST00000558961 EZH2Q15910 746 aaKnown RBP15.51■□□□□ 0.07
BMP4-204ENST00000558961 BTAF1O14981 1849 aa15.51■□□□□ 0.07
BMP4-204ENST00000558961 KIF7Q2M1P5 1343 aa15.5■□□□□ 0.07
BMP4-204ENST00000558961 BCL11BQ9C0K0 894 aaPredicted RBP15.5■□□□□ 0.07
BMP4-204ENST00000558961 DOT1LQ8TEK3 1739 aa15.5■□□□□ 0.07
BMP4-204ENST00000558961 PLSCR1O15162 318 aa15.49■□□□□ 0.07
BMP4-204ENST00000558961 LTV1Q96GA3 475 aaPredicted RBP15.49■□□□□ 0.07
BMP4-204ENST00000558961 POLR3GLQ9BT43 218 aa15.49■□□□□ 0.07
BMP4-204ENST00000558961 PANK3Q9H999 370 aa15.49■□□□□ 0.07
BMP4-204ENST00000558961 HSP90AB2PQ58FF8 381 aa15.48■□□□□ 0.07
BMP4-204ENST00000558961 EMILIN1Q9Y6C2 1016 aa15.48■□□□□ 0.07
BMP4-204ENST00000558961 WASHC2AQ641Q2 1341 aa15.47■□□□□ 0.07
BMP4-204ENST00000558961 NBPF6Q5VWK0 638 aa15.47■□□□□ 0.07
BMP4-204ENST00000558961 NBPF4Q96M43 638 aa15.47■□□□□ 0.07
BMP4-204ENST00000558961 PTF1AQ7RTS3 328 aa15.46■□□□□ 0.07
BMP4-204ENST00000558961 POLKQ9UBT6 870 aa15.45■□□□□ 0.06
BMP4-204ENST00000558961 PAPPAQ13219 1627 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms