RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 POLR3GLQ9BT43 218 aa21.36■■□□□ 1.01
RPL28-207ENST00000558815 AXIN2Q9Y2T1 843 aa21.36■■□□□ 1.01
RPL28-207ENST00000558815 ANKRD36BQ8N2N9 1353 aa21.36■■□□□ 1.01
RPL28-207ENST00000558815 TCP11L2Q8N4U5 519 aa21.35■■□□□ 1.01
RPL28-207ENST00000558815 CRB1P82279 1406 aa21.35■■□□□ 1.01
RPL28-207ENST00000558815 TOM1L2Q6ZVM7 507 aa21.34■■□□□ 1.01
RPL28-207ENST00000558815 BLMP54132 1417 aaPredicted RBP21.34■■□□□ 1.01
RPL28-207ENST00000558815 MYOM1P52179 1685 aa21.34■■□□□ 1.01
RPL28-207ENST00000558815 OVOS2A0A0J9YW53 1432 aa21.33■■□□□ 1.01
RPL28-207ENST00000558815 OVOS2Q6IE36 1432 aa21.33■■□□□ 1.01
RPL28-207ENST00000558815 CSB-PGBD3P0DP91 1061 aa21.33■■□□□ 1.01
RPL28-207ENST00000558815 CCDC125Q86Z20 511 aa21.33■■□□□ 1.01
RPL28-207ENST00000558815 SF3B2Q13435 895 aaKnown RBP21.32■■□□□ 1
RPL28-207ENST00000558815 BARGINQ6ZT62 677 aa21.32■■□□□ 1
RPL28-207ENST00000558815 EIF4G2P78344 907 aaKnown RBP eCLIP21.31■■□□□ 1
RPL28-207ENST00000558815 WDR17Q8IZU2 1322 aa21.3■■□□□ 1
RPL28-207ENST00000558815 KIF20BQ96Q89 1820 aa21.3■■□□□ 1
RPL28-207ENST00000558815 WNK3Q9BYP7 1800 aa21.3■■□□□ 1
RPL28-207ENST00000558815 HSPA5P11021 654 aaKnown RBP21.3■■□□□ 1
RPL28-207ENST00000558815 COG3Q96JB2 828 aa21.3■■□□□ 1
RPL28-207ENST00000558815 PDE3BQ13370 1112 aa21.29■■□□□ 1
RPL28-207ENST00000558815 THRAP3Q9Y2W1 955 aaKnown RBP21.29■■□□□ 1
RPL28-207ENST00000558815 PARP4Q9UKK3 1724 aaKnown RBP21.29■■□□□ 1
RPL28-207ENST00000558815 DEFB132Q7Z7B7 95 aa21.28■■□□□ 1
RPL28-207ENST00000558815 RGPD1P0DJD0 1748 aa21.28■■□□□ 1
RPL28-207ENST00000558815 ABCC6O95255 1503 aa21.28■■□□□ 1
RPL28-207ENST00000558815 GGNBP2Q9H3C7 697 aa21.27■■□□□ 1
RPL28-207ENST00000558815 LRRC37A3O60309 1634 aa21.26■□□□□ 0.99
RPL28-207ENST00000558815 NSD3Q9BZ95 1437 aa21.24■□□□□ 0.99
RPL28-207ENST00000558815 FBLN1P23142 703 aa21.24■□□□□ 0.99
RPL28-207ENST00000558815 CARD10Q9BWT7 1032 aa21.23■□□□□ 0.99
RPL28-207ENST00000558815 TNS1Q9HBL0 1735 aaKnown RBP21.23■□□□□ 0.99
RPL28-207ENST00000558815 FYB1O15117 783 aa21.22■□□□□ 0.99
RPL28-207ENST00000558815 BAG6P46379 1132 aa21.22■□□□□ 0.99
RPL28-207ENST00000558815 FAM196AQ6ZSG2 479 aa21.22■□□□□ 0.99
RPL28-207ENST00000558815 ANKRD24Q8TF21 1146 aa21.22■□□□□ 0.99
RPL28-207ENST00000558815 LTV1Q96GA3 475 aaPredicted RBP21.22■□□□□ 0.99
RPL28-207ENST00000558815 NLRP2Q9NX02 1062 aa21.22■□□□□ 0.99
RPL28-207ENST00000558815 TRIM37O94972 964 aa21.21■□□□□ 0.99
RPL28-207ENST00000558815 DDB1Q16531 1140 aa21.21■□□□□ 0.99
RPL28-207ENST00000558815 CARD14Q9BXL6 1004 aa21.21■□□□□ 0.99
RPL28-207ENST00000558815 ERBB3P21860 1342 aa21.21■□□□□ 0.99
RPL28-207ENST00000558815 MAP3K19Q56UN5 1328 aa21.2■□□□□ 0.98
RPL28-207ENST00000558815 CCDC7Q96M83 1385 aa21.2■□□□□ 0.98
RPL28-207ENST00000558815 AMPHP49418 695 aa21.19■□□□□ 0.98
RPL28-207ENST00000558815 RRS1Q15050 365 aaKnown RBP21.18■□□□□ 0.98
RPL28-207ENST00000558815 IP6K1Q92551 441 aa21.18■□□□□ 0.98
RPL28-207ENST00000558815 EN1Q05925 392 aaPredicted RBP21.17■□□□□ 0.98
RPL28-207ENST00000558815 FAM208AQ9UK61 1670 aaKnown RBP21.16■□□□□ 0.98
RPL28-207ENST00000558815 DISP2A7MBM2 1401 aa21.16■□□□□ 0.98
RPL28-207ENST00000558815 HOXC9P31274 260 aa21.16■□□□□ 0.98
RPL28-207ENST00000558815 CDCA7Q9BWT1 371 aaPredicted RBP21.16■□□□□ 0.98
RPL28-207ENST00000558815 RGPD2P0DJD1 1756 aa21.15■□□□□ 0.98
RPL28-207ENST00000558815 OVOS2A0A0G2JMS6 1433 aa21.15■□□□□ 0.98
RPL28-207ENST00000558815 PEAK1Q9H792 1746 aa21.15■□□□□ 0.98
RPL28-207ENST00000558815 APBA3O96018 575 aa21.13■□□□□ 0.97
RPL28-207ENST00000558815 SBF2Q86WG5 1849 aa21.13■□□□□ 0.97
RPL28-207ENST00000558815 CGNL1Q0VF96 1302 aa21.12■□□□□ 0.97
RPL28-207ENST00000558815 C11orf95C9JLR9 678 aaPredicted RBP21.12■□□□□ 0.97
RPL28-207ENST00000558815 EXOC5O00471 708 aa21.12■□□□□ 0.97
RPL28-207ENST00000558815 TNS2Q63HR2 1409 aa21.12■□□□□ 0.97
RPL28-207ENST00000558815 IL2RBP14784 551 aa21.11■□□□□ 0.97
RPL28-207ENST00000558815 EZH2Q15910 746 aaKnown RBP21.11■□□□□ 0.97
RPL28-207ENST00000558815 MARCH10Q8NA82 808 aaPredicted RBP21.11■□□□□ 0.97
RPL28-207ENST00000558815 RTL1A6NKG5 1358 aa21.1■□□□□ 0.97
RPL28-207ENST00000558815 ANKRD26Q9UPS8 1709 aa21.1■□□□□ 0.97
RPL28-207ENST00000558815 PANK3Q9H999 370 aa21.1■□□□□ 0.97
RPL28-207ENST00000558815 SMG6Q86US8 1419 aaKnown RBP21.07■□□□□ 0.96
RPL28-207ENST00000558815 PPM1GO15355 546 aaPredicted RBP21.07■□□□□ 0.96
RPL28-207ENST00000558815 EMILIN1Q9Y6C2 1016 aa21.07■□□□□ 0.96
RPL28-207ENST00000558815 MAP2P11137 1827 aaKnown RBP21.06■□□□□ 0.96
RPL28-207ENST00000558815 TNNT2P45379 298 aaPredicted RBP21.06■□□□□ 0.96
RPL28-207ENST00000558815 HSP90AB2PQ58FF8 381 aa21.06■□□□□ 0.96
RPL28-207ENST00000558815 FLT4P35916 1363 aa21.06■□□□□ 0.96
RPL28-207ENST00000558815 PSDA5PKW4 1024 aaPredicted RBP21.05■□□□□ 0.96
RPL28-207ENST00000558815 USHBP1Q8N6Y0 703 aa21.05■□□□□ 0.96
RPL28-207ENST00000558815 KIF7Q2M1P5 1343 aa21.04■□□□□ 0.96
RPL28-207ENST00000558815 PTF1AQ7RTS3 328 aa21.04■□□□□ 0.96
RPL28-207ENST00000558815 CAMKK2Q96RR4 588 aa21.04■□□□□ 0.96
RPL28-207ENST00000558815 RREB1Q92766 1687 aa21.03■□□□□ 0.96
RPL28-207ENST00000558815 INSRP06213 1382 aa21.03■□□□□ 0.96
RPL28-207ENST00000558815 NUP188Q5SRE5 1749 aa21.02■□□□□ 0.96
RPL28-207ENST00000558815 NBPF6Q5VWK0 638 aa21.02■□□□□ 0.96
RPL28-207ENST00000558815 ACSBG1Q96GR2 724 aa21.02■□□□□ 0.96
RPL28-207ENST00000558815 NBPF4Q96M43 638 aa21.02■□□□□ 0.96
RPL28-207ENST00000558815 DDX54Q8TDD1 881 aaKnown RBP21.01■□□□□ 0.95
RPL28-207ENST00000558815 BCL11BQ9C0K0 894 aaPredicted RBP21.01■□□□□ 0.95
RPL28-207ENST00000558815 KIF24Q5T7B8 1368 aa21■□□□□ 0.95
RPL28-207ENST00000558815 PARD3Q8TEW0 1356 aa21■□□□□ 0.95
RPL28-207ENST00000558815 MEGF6O75095 1541 aa21■□□□□ 0.95
RPL28-207ENST00000558815 KAT6BQ8WYB5 2073 aa21■□□□□ 0.95
RPL28-207ENST00000558815 NHSQ6T4R5 1651 aa20.99■□□□□ 0.95
RPL28-207ENST00000558815 BCL9O00512 1426 aa20.99■□□□□ 0.95
RPL28-207ENST00000558815 R3HDM1Q15032 1099 aaKnown RBP20.98■□□□□ 0.95
RPL28-207ENST00000558815 KNSTRNQ9Y448 316 aa20.98■□□□□ 0.95
RPL28-207ENST00000558815 SHANK3Q9BYB0 1731 aa20.98■□□□□ 0.95
RPL28-207ENST00000558815 KCNQ2O43526 872 aa20.97■□□□□ 0.95
RPL28-207ENST00000558815 RAPGEF4Q8WZA2 1011 aa20.97■□□□□ 0.95
RPL28-207ENST00000558815 POLKQ9UBT6 870 aa20.97■□□□□ 0.95
RPL28-207ENST00000558815 RGPD3A6NKT7 1758 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms