RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 AATKQ6ZMQ8 1374 aa19.13■□□□□ 0.65
TSPAN3-205ENST00000558745 SEPT12Q8IYM1 358 aa19.13■□□□□ 0.65
TSPAN3-205ENST00000558745 NFAT5O94916 1531 aa19.12■□□□□ 0.65
TSPAN3-205ENST00000558745 LMO7Q8WWI1 1683 aa19.12■□□□□ 0.65
TSPAN3-205ENST00000558745 COL18A1P39060 1754 aa19.11■□□□□ 0.65
TSPAN3-205ENST00000558745 SPATA31A1Q5TZJ5 1347 aa19.11■□□□□ 0.65
TSPAN3-205ENST00000558745 ONECUT3O60422 494 aaPredicted RBP19.11■□□□□ 0.65
TSPAN3-205ENST00000558745 A0A0G2JS52 829 aa19.1■□□□□ 0.65
TSPAN3-205ENST00000558745 MYT1Q01538 1121 aa19.1■□□□□ 0.65
TSPAN3-205ENST00000558745 COL5A2P05997 1499 aaPredicted RBP19.09■□□□□ 0.65
TSPAN3-205ENST00000558745 RRS1Q15050 365 aaKnown RBP19.08■□□□□ 0.65
TSPAN3-205ENST00000558745 USP54Q70EL1 1684 aa19.08■□□□□ 0.65
TSPAN3-205ENST00000558745 RGPD5Q99666 1765 aa19.08■□□□□ 0.64
TSPAN3-205ENST00000558745 WASHC2AQ641Q2 1341 aa19.07■□□□□ 0.64
TSPAN3-205ENST00000558745 CSB-PGBD3P0DP91 1061 aa19.07■□□□□ 0.64
TSPAN3-205ENST00000558745 TOM1L2Q6ZVM7 507 aa19.07■□□□□ 0.64
TSPAN3-205ENST00000558745 CCDC125Q86Z20 511 aa19.07■□□□□ 0.64
TSPAN3-205ENST00000558745 MAP3K19Q56UN5 1328 aa19.07■□□□□ 0.64
TSPAN3-205ENST00000558745 FAM182BQ5T319 152 aa19.05■□□□□ 0.64
TSPAN3-205ENST00000558745 LTV1Q96GA3 475 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-205ENST00000558745 TCP11L2Q8N4U5 519 aa19.04■□□□□ 0.64
TSPAN3-205ENST00000558745 CCDC7Q96M83 1385 aa19.04■□□□□ 0.64
TSPAN3-205ENST00000558745 BRWD3Q6RI45 1802 aa19.04■□□□□ 0.64
TSPAN3-205ENST00000558745 CGNL1Q0VF96 1302 aa19.04■□□□□ 0.64
TSPAN3-205ENST00000558745 WDR17Q8IZU2 1322 aa19.04■□□□□ 0.64
TSPAN3-205ENST00000558745 TNNT2P45379 298 aaPredicted RBP19.03■□□□□ 0.64
TSPAN3-205ENST00000558745 AMPHP49418 695 aa19.03■□□□□ 0.64
TSPAN3-205ENST00000558745 IP6K1Q92551 441 aa19.03■□□□□ 0.64
TSPAN3-205ENST00000558745 LTN1O94822 1766 aa19.03■□□□□ 0.64
TSPAN3-205ENST00000558745 CRB1P82279 1406 aa19.03■□□□□ 0.64
TSPAN3-205ENST00000558745 KIF20BQ96Q89 1820 aa19.03■□□□□ 0.64
TSPAN3-205ENST00000558745 KRT27Q7Z3Y8 459 aa19.02■□□□□ 0.64
TSPAN3-205ENST00000558745 ANKRD24Q8TF21 1146 aa19.02■□□□□ 0.64
TSPAN3-205ENST00000558745 HOXC9P31274 260 aa19.01■□□□□ 0.63
TSPAN3-205ENST00000558745 BARGINQ6ZT62 677 aa19■□□□□ 0.63
TSPAN3-205ENST00000558745 NLRP2Q9NX02 1062 aa19■□□□□ 0.63
TSPAN3-205ENST00000558745 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
TSPAN3-205ENST00000558745 CNGB1Q14028 1251 aaPredicted RBP19■□□□□ 0.63
TSPAN3-205ENST00000558745 KNSTRNQ9Y448 316 aa19■□□□□ 0.63
TSPAN3-205ENST00000558745 ERBB3P21860 1342 aa18.99■□□□□ 0.63
TSPAN3-205ENST00000558745 PPM1GO15355 546 aaPredicted RBP18.99■□□□□ 0.63
TSPAN3-205ENST00000558745 HSP90AB2PQ58FF8 381 aa18.99■□□□□ 0.63
TSPAN3-205ENST00000558745 CARD10Q9BWT7 1032 aa18.99■□□□□ 0.63
TSPAN3-205ENST00000558745 THRAP3Q9Y2W1 955 aaKnown RBP18.99■□□□□ 0.63
TSPAN3-205ENST00000558745 PER1O15534 1290 aaPredicted RBP18.98■□□□□ 0.63
TSPAN3-205ENST00000558745 EP400Q96L91 3159 aa18.97■□□□□ 0.63
TSPAN3-205ENST00000558745 AMER1Q5JTC6 1135 aaPredicted RBP18.96■□□□□ 0.63
TSPAN3-205ENST00000558745 POLKQ9UBT6 870 aa18.96■□□□□ 0.63
TSPAN3-205ENST00000558745 THSD7AQ9UPZ6 1657 aa18.96■□□□□ 0.63
TSPAN3-205ENST00000558745 PDE3BQ13370 1112 aa18.95■□□□□ 0.62
TSPAN3-205ENST00000558745 MORC1Q86VD1 984 aa18.95■□□□□ 0.62
TSPAN3-205ENST00000558745 BLMP54132 1417 aaPredicted RBP18.94■□□□□ 0.62
TSPAN3-205ENST00000558745 CC2D1BQ5T0F9 858 aaKnown RBP18.94■□□□□ 0.62
TSPAN3-205ENST00000558745 PEAK1Q9H792 1746 aa18.93■□□□□ 0.62
TSPAN3-205ENST00000558745 ABCC6O95255 1503 aa18.93■□□□□ 0.62
TSPAN3-205ENST00000558745 LRP5O75197 1615 aa18.93■□□□□ 0.62
TSPAN3-205ENST00000558745 USHBP1Q8N6Y0 703 aa18.93■□□□□ 0.62
TSPAN3-205ENST00000558745 NBPF6Q5VWK0 638 aa18.92■□□□□ 0.62
TSPAN3-205ENST00000558745 NBPF4Q96M43 638 aa18.92■□□□□ 0.62
TSPAN3-205ENST00000558745 DDB1Q16531 1140 aa18.91■□□□□ 0.62
TSPAN3-205ENST00000558745 MAP2P11137 1827 aaKnown RBP18.9■□□□□ 0.62
TSPAN3-205ENST00000558745 RTL1A6NKG5 1358 aa18.9■□□□□ 0.62
TSPAN3-205ENST00000558745 RGPD2P0DJD1 1756 aa18.89■□□□□ 0.61
TSPAN3-205ENST00000558745 DISP2A7MBM2 1401 aa18.89■□□□□ 0.61
TSPAN3-205ENST00000558745 INSRP06213 1382 aa18.89■□□□□ 0.61
TSPAN3-205ENST00000558745 FLT4P35916 1363 aa18.89■□□□□ 0.61
TSPAN3-205ENST00000558745 NSD2O96028 1365 aa18.88■□□□□ 0.61
TSPAN3-205ENST00000558745 EXOC5O00471 708 aa18.88■□□□□ 0.61
TSPAN3-205ENST00000558745 IL2RBP14784 551 aa18.88■□□□□ 0.61
TSPAN3-205ENST00000558745 ZEB1P37275 1124 aaPredicted RBP18.88■□□□□ 0.61
TSPAN3-205ENST00000558745 MARCH10Q8NA82 808 aaPredicted RBP18.88■□□□□ 0.61
TSPAN3-205ENST00000558745 ANKRD26Q9UPS8 1709 aa18.88■□□□□ 0.61
TSPAN3-205ENST00000558745 DEFB132Q7Z7B7 95 aa18.87■□□□□ 0.61
TSPAN3-205ENST00000558745 TRIM37O94972 964 aa18.86■□□□□ 0.61
TSPAN3-205ENST00000558745 FAM196AQ6ZSG2 479 aa18.86■□□□□ 0.61
TSPAN3-205ENST00000558745 CDCA7Q9BWT1 371 aaPredicted RBP18.86■□□□□ 0.61
TSPAN3-205ENST00000558745 PARP4Q9UKK3 1724 aaKnown RBP18.85■□□□□ 0.61
TSPAN3-205ENST00000558745 KIF24Q5T7B8 1368 aa18.85■□□□□ 0.61
TSPAN3-205ENST00000558745 EIF4A2Q14240 407 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-205ENST00000558745 LRRC37A3O60309 1634 aa18.84■□□□□ 0.61
TSPAN3-205ENST00000558745 PTF1AQ7RTS3 328 aa18.83■□□□□ 0.61
TSPAN3-205ENST00000558745 EYA1Q99502 592 aa18.83■□□□□ 0.61
TSPAN3-205ENST00000558745 WNK3Q9BYP7 1800 aa18.83■□□□□ 0.6
TSPAN3-205ENST00000558745 SF3B2Q13435 895 aaKnown RBP18.82■□□□□ 0.6
TSPAN3-205ENST00000558745 DDX54Q8TDD1 881 aaKnown RBP18.82■□□□□ 0.6
TSPAN3-205ENST00000558745 SMG6Q86US8 1419 aaKnown RBP18.82■□□□□ 0.6
TSPAN3-205ENST00000558745 MTHFSP49914 203 aa18.81■□□□□ 0.6
TSPAN3-205ENST00000558745 DDX10Q13206 875 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-205ENST00000558745 FAM208AQ9UK61 1670 aaKnown RBP18.8■□□□□ 0.6
TSPAN3-205ENST00000558745 MEGF6O75095 1541 aa18.79■□□□□ 0.6
TSPAN3-205ENST00000558745 EN1Q05925 392 aaPredicted RBP18.79■□□□□ 0.6
TSPAN3-205ENST00000558745 ACSBG1Q96GR2 724 aa18.78■□□□□ 0.6
TSPAN3-205ENST00000558745 APBA3O96018 575 aa18.77■□□□□ 0.6
TSPAN3-205ENST00000558745 TATP17735 454 aaPredicted RBP18.77■□□□□ 0.6
TSPAN3-205ENST00000558745 ZCRB1Q8TBF4 217 aaKnown RBP18.77■□□□□ 0.6
TSPAN3-205ENST00000558745 RAPGEF4Q8WZA2 1011 aa18.77■□□□□ 0.6
TSPAN3-205ENST00000558745 NPC1L1Q9UHC9 1359 aa18.77■□□□□ 0.6
TSPAN3-205ENST00000558745 OVOS2A0A0G2JMS6 1433 aa18.77■□□□□ 0.6
TSPAN3-205ENST00000558745 TNS2Q63HR2 1409 aa18.77■□□□□ 0.6
TSPAN3-205ENST00000558745 KCNQ2O43526 872 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms