RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 HNRNPH2P55795 449 aaKnown RBP4.35□□□□□ -1.71
ATXN3-248ENST00000558190 RASSF4Q9H2L5 321 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 TUBB4AP04350 444 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 MX1P20591 662 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 U2AF2P26368 475 aaKnown RBP eCLIP4.35□□□□□ -1.714e-7■■■□□ 17.3
ATXN3-248ENST00000558190 LRCH2Q5VUJ6 765 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 RUNDC1Q96C34 613 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 EXOSC9Q06265 439 aaKnown RBP4.35□□□□□ -1.71
ATXN3-248ENST00000558190 NUTM2DQ5VT03 806 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-248ENST00000558190 WDR63Q8IWG1 891 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 INCENPQ9NQS7 918 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 CLIP2Q9UDT6 1046 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 TMCO5BA8MYB1 307 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 EFCC1Q9HA90 598 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.35□□□□□ -1.71
ATXN3-248ENST00000558190 NEUROD6Q96NK8 337 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 CBFA2T2O43439 604 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 C16orf71Q8IYS4 520 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-248ENST00000558190 KIF5CO60282 957 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 HDXQ7Z353 690 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 FIBPO43427 364 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 GDPD2Q9HCC8 539 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 CCDC148Q8NFR7 591 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 SECISBP2LQ93073 1101 aaKnown RBP4.35□□□□□ -1.71
ATXN3-248ENST00000558190 CPLX2Q6PUV4 134 aaKnown RBP4.35□□□□□ -1.71
ATXN3-248ENST00000558190 MAGEC2Q9UBF1 373 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-248ENST00000558190 KIF4AO95239 1232 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 SPA17Q15506 151 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 CRACR2AQ9BSW2 395 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 PCDHB15Q9Y5E8 787 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 ARID4AP29374 1257 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-248ENST00000558190 ANO10Q9NW15 660 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 MIS18AQ9NYP9 233 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 SMARCA5O60264 1052 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-248ENST00000558190 ZNF165P49910 485 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 MTHFSP49914 203 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 CCDC47Q96A33 483 aaKnown RBP4.34□□□□□ -1.71
ATXN3-248ENST00000558190 ZCCHC17Q9NP64 241 aaKnown RBP4.34□□□□□ -1.71
ATXN3-248ENST00000558190 GAS2L3Q86XJ1 694 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 MAP3K11Q16584 847 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 VPS53Q5VIR6 699 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 DHX16O60231 1041 aaKnown RBP4.34□□□□□ -1.71
ATXN3-248ENST00000558190 CCDC121Q6ZUS5 278 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 USP25Q9UHP3 1055 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 OPA1O60313 960 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 ARHGAP29Q52LW3 1261 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 RPAINQ86UA6 219 aa4.34□□□□□ -1.71
ATXN3-248ENST00000558190 NUP133Q8WUM0 1156 aa4.34□□□□□ -1.72
ATXN3-248ENST00000558190 RBM42Q9BTD8 480 aaKnown RBP4.34□□□□□ -1.72
ATXN3-248ENST00000558190 EPB41L2O43491 1005 aaKnown RBP4.34□□□□□ -1.72
ATXN3-248ENST00000558190 SPECC1Q5M775 1068 aa4.34□□□□□ -1.72
ATXN3-248ENST00000558190 HSP90AB4PQ58FF6 505 aa4.34□□□□□ -1.72
ATXN3-248ENST00000558190 CCDC183Q5T5S1 534 aa4.34□□□□□ -1.72
ATXN3-248ENST00000558190 PPARDQ03181 441 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 STK3Q13188 491 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 STAC3Q96MF2 364 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 SSR1P43307 286 aaKnown RBP4.33□□□□□ -1.72
ATXN3-248ENST00000558190 CCAR1Q8IX12 1150 aaKnown RBP4.33□□□□□ -1.72
ATXN3-248ENST00000558190 MYCBPQ99417 103 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-248ENST00000558190 SEPT7Q16181 437 aaKnown RBP4.33□□□□□ -1.72
ATXN3-248ENST00000558190 RIOK3O14730 519 aaKnown RBP4.33□□□□□ -1.72
ATXN3-248ENST00000558190 PCK1P35558 622 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 SHTN1A0MZ66 631 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 TUBB4BP68371 445 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 C16orf45Q96MC5 204 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-248ENST00000558190 UTP14CQ5TAP6 766 aaKnown RBP4.33□□□□□ -1.72
ATXN3-248ENST00000558190 FAM160A1Q05DH4 1040 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 DMTNQ08495 405 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 KIF3CO14782 793 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 C1orf115Q9H7X2 142 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 MAP4K4O95819 1239 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-248ENST00000558190 GBP3Q9H0R5 595 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 RABEP2Q9H5N1 569 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 HDGFL2Q7Z4V5 671 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-248ENST00000558190 SMARCE1Q969G3 411 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 SCLT1Q96NL6 688 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 MKRN1Q9UHC7 482 aaKnown RBP4.33□□□□□ -1.72
ATXN3-248ENST00000558190 HSPA4P34932 840 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 FERMT3Q86UX7 667 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 POTEB2H3BUK9 544 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 ATP6V1AP38606 617 aa4.33□□□□□ -1.72
ATXN3-248ENST00000558190 PTGS1P23219 599 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 MYBBP1AQ9BQG0 1328 aaKnown RBP4.32□□□□□ -1.72
ATXN3-248ENST00000558190 BIN1O00499 593 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 PPP2R1AP30153 589 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 MYRIPQ8NFW9 859 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 SFPQP23246 707 aaKnown RBP eCLIP4.32□□□□□ -1.72
ATXN3-248ENST00000558190 CPLX4Q7Z7G2 160 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 TERF2IPQ9NYB0 399 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 ATP2B3Q16720 1220 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 TAF4BQ92750 862 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 SETSIPP0DME0 302 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 SYTL4Q96C24 671 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-248ENST00000558190 HDGFP51858 240 aaKnown RBP4.32□□□□□ -1.72
ATXN3-248ENST00000558190 CLNS1AP54105 237 aaKnown RBP4.32□□□□□ -1.72
ATXN3-248ENST00000558190 IFT81Q8WYA0 676 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 GCC1Q96CN9 775 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 PUF60Q9UHX1 559 aaKnown RBP4.32□□□□□ -1.72
ATXN3-248ENST00000558190 ZKSCAN5Q9Y2L8 839 aa4.32□□□□□ -1.72
ATXN3-248ENST00000558190 DBN1Q16643 649 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms