RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 ZBTB7CA1YPR0 619 aa31.26■■■□□ 2.59
PABPN1-206ENST00000556809 ABCC6O95255 1503 aa31.24■■■□□ 2.59
PABPN1-206ENST00000556809 LTN1O94822 1766 aa31.23■■■□□ 2.59
PABPN1-206ENST00000556809 BARGINQ6ZT62 677 aa31.22■■■□□ 2.59
PABPN1-206ENST00000556809 EP400Q96L91 3159 aa31.22■■■□□ 2.59
PABPN1-206ENST00000556809 KRT27Q7Z3Y8 459 aa31.21■■■□□ 2.59
PABPN1-206ENST00000556809 CRB1P82279 1406 aa31.21■■■□□ 2.59
PABPN1-206ENST00000556809 CARD14Q9BXL6 1004 aa31.19■■■□□ 2.58
PABPN1-206ENST00000556809 USP35Q9P2H5 1018 aa31.19■■■□□ 2.58
PABPN1-206ENST00000556809 FYB1O15117 783 aa31.18■■■□□ 2.58
PABPN1-206ENST00000556809 TCP11L2Q8N4U5 519 aa31.18■■■□□ 2.58
PABPN1-206ENST00000556809 A0A0G2JS52 829 aa31.17■■■□□ 2.58
PABPN1-206ENST00000556809 MYT1Q01538 1121 aa31.17■■■□□ 2.58
PABPN1-206ENST00000556809 THRAP3Q9Y2W1 955 aaKnown RBP31.17■■■□□ 2.58
PABPN1-206ENST00000556809 WDR17Q8IZU2 1322 aa31.17■■■□□ 2.58
PABPN1-206ENST00000556809 C11orf95C9JLR9 678 aaPredicted RBP31.16■■■□□ 2.58
PABPN1-206ENST00000556809 COG3Q96JB2 828 aa31.16■■■□□ 2.58
PABPN1-206ENST00000556809 POLR3GLQ9BT43 218 aa31.16■■■□□ 2.58
PABPN1-206ENST00000556809 KIF20BQ96Q89 1820 aa31.16■■■□□ 2.58
PABPN1-206ENST00000556809 NSD3Q9BZ95 1437 aa31.12■■■□□ 2.57
PABPN1-206ENST00000556809 PARP4Q9UKK3 1724 aaKnown RBP31.12■■■□□ 2.57
PABPN1-206ENST00000556809 TOM1L2Q6ZVM7 507 aa31.11■■■□□ 2.57
PABPN1-206ENST00000556809 CCDC125Q86Z20 511 aa31.11■■■□□ 2.57
PABPN1-206ENST00000556809 GGNBP2Q9H3C7 697 aa31.11■■■□□ 2.57
PABPN1-206ENST00000556809 KIF7Q2M1P5 1343 aa31.09■■■□□ 2.57
PABPN1-206ENST00000556809 WNK3Q9BYP7 1800 aa31.09■■■□□ 2.57
PABPN1-206ENST00000556809 FBLN1P23142 703 aa31.08■■■□□ 2.57
PABPN1-206ENST00000556809 BLMP54132 1417 aaPredicted RBP31.07■■■□□ 2.57
PABPN1-206ENST00000556809 CARD10Q9BWT7 1032 aa31.07■■■□□ 2.56
PABPN1-206ENST00000556809 ERBB3P21860 1342 aa31.06■■■□□ 2.56
PABPN1-206ENST00000556809 IP6K1Q92551 441 aa31.06■■■□□ 2.56
PABPN1-206ENST00000556809 MAP3K19Q56UN5 1328 aa31.05■■■□□ 2.56
PABPN1-206ENST00000556809 FAM182BQ5T319 152 aa31.05■■■□□ 2.56
PABPN1-206ENST00000556809 CSB-PGBD3P0DP91 1061 aa31.04■■■□□ 2.56
PABPN1-206ENST00000556809 CCDC7Q96M83 1385 aa31.02■■■□□ 2.56
PABPN1-206ENST00000556809 LRRC37A3O60309 1634 aa31.02■■■□□ 2.56
PABPN1-206ENST00000556809 DISP2A7MBM2 1401 aa31.01■■■□□ 2.55
PABPN1-206ENST00000556809 ANKRD24Q8TF21 1146 aa31.01■■■□□ 2.55
PABPN1-206ENST00000556809 WASHC2AQ641Q2 1341 aa30.99■■■□□ 2.55
PABPN1-206ENST00000556809 HOXC9P31274 260 aa30.99■■■□□ 2.55
PABPN1-206ENST00000556809 PANK3Q9H999 370 aa30.99■■■□□ 2.55
PABPN1-206ENST00000556809 CGNL1Q0VF96 1302 aa30.98■■■□□ 2.55
PABPN1-206ENST00000556809 PDE3BQ13370 1112 aa30.98■■■□□ 2.55
PABPN1-206ENST00000556809 CDCA7Q9BWT1 371 aaPredicted RBP30.98■■■□□ 2.55
PABPN1-206ENST00000556809 RTL1A6NKG5 1358 aa30.97■■■□□ 2.55
PABPN1-206ENST00000556809 RRS1Q15050 365 aaKnown RBP30.97■■■□□ 2.55
PABPN1-206ENST00000556809 RGPD1P0DJD0 1748 aa30.97■■■□□ 2.55
PABPN1-206ENST00000556809 FAM208AQ9UK61 1670 aaKnown RBP30.97■■■□□ 2.55
PABPN1-206ENST00000556809 FAM196AQ6ZSG2 479 aa30.96■■■□□ 2.55
PABPN1-206ENST00000556809 ANKRD26Q9UPS8 1709 aa30.95■■■□□ 2.55
PABPN1-206ENST00000556809 AMPHP49418 695 aa30.95■■■□□ 2.55
PABPN1-206ENST00000556809 PEAK1Q9H792 1746 aa30.95■■■□□ 2.54
PABPN1-206ENST00000556809 NLRP2Q9NX02 1062 aa30.94■■■□□ 2.54
PABPN1-206ENST00000556809 TNS1Q9HBL0 1735 aaKnown RBP30.93■■■□□ 2.54
PABPN1-206ENST00000556809 DDB1Q16531 1140 aa30.93■■■□□ 2.54
PABPN1-206ENST00000556809 DEFB132Q7Z7B7 95 aa30.91■■■□□ 2.54
PABPN1-206ENST00000556809 RGPD2P0DJD1 1756 aa30.91■■■□□ 2.54
PABPN1-206ENST00000556809 KIF24Q5T7B8 1368 aa30.91■■■□□ 2.54
PABPN1-206ENST00000556809 SF3B2Q13435 895 aaKnown RBP30.9■■■□□ 2.54
PABPN1-206ENST00000556809 LTV1Q96GA3 475 aaPredicted RBP30.89■■■□□ 2.54
PABPN1-206ENST00000556809 MAP2P11137 1827 aaKnown RBP30.89■■■□□ 2.53
PABPN1-206ENST00000556809 MARCH10Q8NA82 808 aaPredicted RBP30.86■■■□□ 2.53
PABPN1-206ENST00000556809 INSRP06213 1382 aa30.86■■■□□ 2.53
PABPN1-206ENST00000556809 FLT4P35916 1363 aa30.86■■■□□ 2.53
PABPN1-206ENST00000556809 OVOS2A0A0G2JMS6 1433 aa30.86■■■□□ 2.53
PABPN1-206ENST00000556809 SBF2Q86WG5 1849 aa30.86■■■□□ 2.53
PABPN1-206ENST00000556809 IL2RBP14784 551 aa30.85■■■□□ 2.53
PABPN1-206ENST00000556809 HSP90AB2PQ58FF8 381 aa30.85■■■□□ 2.53
PABPN1-206ENST00000556809 EMILIN1Q9Y6C2 1016 aa30.85■■■□□ 2.53
PABPN1-206ENST00000556809 TNS2Q63HR2 1409 aa30.84■■■□□ 2.53
PABPN1-206ENST00000556809 NSD2O96028 1365 aa30.84■■■□□ 2.53
PABPN1-206ENST00000556809 EXOC5O00471 708 aa30.84■■■□□ 2.53
PABPN1-206ENST00000556809 TRIM37O94972 964 aa30.84■■■□□ 2.53
PABPN1-206ENST00000556809 BCL9O00512 1426 aa30.83■■■□□ 2.53
PABPN1-206ENST00000556809 BAG6P46379 1132 aa30.82■■■□□ 2.52
PABPN1-206ENST00000556809 POLKQ9UBT6 870 aa30.8■■■□□ 2.52
PABPN1-206ENST00000556809 NBPF6Q5VWK0 638 aa30.79■■■□□ 2.52
PABPN1-206ENST00000556809 NBPF4Q96M43 638 aa30.79■■■□□ 2.52
PABPN1-206ENST00000556809 KNSTRNQ9Y448 316 aa30.79■■■□□ 2.52
PABPN1-206ENST00000556809 PER1O15534 1290 aaPredicted RBP30.78■■■□□ 2.52
PABPN1-206ENST00000556809 EN1Q05925 392 aaPredicted RBP30.78■■■□□ 2.52
PABPN1-206ENST00000556809 SMG6Q86US8 1419 aaKnown RBP30.77■■■□□ 2.52
PABPN1-206ENST00000556809 AMER1Q5JTC6 1135 aaPredicted RBP30.76■■■□□ 2.51
PABPN1-206ENST00000556809 TNNT2P45379 298 aaPredicted RBP30.74■■■□□ 2.51
PABPN1-206ENST00000556809 CAMKK2Q96RR4 588 aa30.74■■■□□ 2.51
PABPN1-206ENST00000556809 PPM1GO15355 546 aaPredicted RBP30.73■■■□□ 2.51
PABPN1-206ENST00000556809 APBA3O96018 575 aa30.73■■■□□ 2.51
PABPN1-206ENST00000556809 MEGF6O75095 1541 aa30.73■■■□□ 2.51
PABPN1-206ENST00000556809 SHANK3Q9BYB0 1731 aa30.71■■■□□ 2.51
PABPN1-206ENST00000556809 EZH2Q15910 746 aaKnown RBP30.7■■■□□ 2.51
PABPN1-206ENST00000556809 PTF1AQ7RTS3 328 aa30.7■■■□□ 2.51
PABPN1-206ENST00000556809 MORC1Q86VD1 984 aa30.7■■■□□ 2.51
PABPN1-206ENST00000556809 USHBP1Q8N6Y0 703 aa30.7■■■□□ 2.51
PABPN1-206ENST00000556809 NCAPD2Q15021 1401 aa30.7■■■□□ 2.5
PABPN1-206ENST00000556809 BCL11BQ9C0K0 894 aaPredicted RBP30.69■■■□□ 2.5
PABPN1-206ENST00000556809 RREB1Q92766 1687 aa30.68■■■□□ 2.5
PABPN1-206ENST00000556809 PARD3Q8TEW0 1356 aa30.67■■■□□ 2.5
PABPN1-206ENST00000556809 RGPD3A6NKT7 1758 aaPredicted RBP30.66■■■□□ 2.5
PABPN1-206ENST00000556809 RGPD4Q7Z3J3 1758 aa30.66■■■□□ 2.5
PABPN1-206ENST00000556809 NHSQ6T4R5 1651 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms