RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 EMILIN1Q9Y6C2 1016 aa12.52□□□□□ -0.41
HNRNPC-223ENST00000556142 U2AF1L5P0DN76 240 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-223ENST00000556142 IL13P35225 146 aa12.51□□□□□ -0.41
HNRNPC-223ENST00000556142 U2AF1Q01081 240 aaKnown RBP eCLIP12.51□□□□□ -0.416e-11■■□□□ 14.2
HNRNPC-223ENST00000556142 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
HNRNPC-223ENST00000556142 ERICH6BQ5W0A0 696 aa12.51□□□□□ -0.41
HNRNPC-223ENST00000556142 TCP11L2Q8N4U5 519 aa12.51□□□□□ -0.41
HNRNPC-223ENST00000556142 NGDNQ8NEJ9 315 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-223ENST00000556142 C8orf37Q96NL8 207 aa12.51□□□□□ -0.41
HNRNPC-223ENST00000556142 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-223ENST00000556142 CCDC27Q2M243 656 aa12.5□□□□□ -0.41
HNRNPC-223ENST00000556142 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
HNRNPC-223ENST00000556142 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
HNRNPC-223ENST00000556142 IRX6P78412 446 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-223ENST00000556142 RRS1Q15050 365 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-223ENST00000556142 LRRC59Q96AG4 307 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-223ENST00000556142 MAP2P11137 1827 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-223ENST00000556142 U2SURPO15042 1029 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-223ENST00000556142 NGLY1Q96IV0 654 aa12.47□□□□□ -0.41
HNRNPC-223ENST00000556142 RCAN3Q9UKA8 241 aa12.47□□□□□ -0.41
HNRNPC-223ENST00000556142 DCCP43146 1447 aa12.47□□□□□ -0.41
HNRNPC-223ENST00000556142 PIK3C2AO00443 1686 aa12.47□□□□□ -0.41
HNRNPC-223ENST00000556142 USP54Q70EL1 1684 aa12.47□□□□□ -0.41
HNRNPC-223ENST00000556142 FCHSD2O94868 740 aa12.47□□□□□ -0.41
HNRNPC-223ENST00000556142 RSPH6AQ9H0K4 717 aa12.47□□□□□ -0.41
HNRNPC-223ENST00000556142 E9PSI1 815 aa12.46□□□□□ -0.42
HNRNPC-223ENST00000556142 WDR63Q8IWG1 891 aa12.46□□□□□ -0.42
HNRNPC-223ENST00000556142 RRP7AQ9Y3A4 280 aaKnown RBP12.46□□□□□ -0.42
HNRNPC-223ENST00000556142 NHSL1Q5SYE7 1610 aa12.46□□□□□ -0.42
HNRNPC-223ENST00000556142 PPM1GO15355 546 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-223ENST00000556142 TMPOP42166 694 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-223ENST00000556142 PEAK1Q9H792 1746 aa12.45□□□□□ -0.42
HNRNPC-223ENST00000556142 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-223ENST00000556142 MST1RQ04912 1400 aa12.44□□□□□ -0.42
HNRNPC-223ENST00000556142 RRP1P56182 461 aaKnown RBP12.44□□□□□ -0.42
HNRNPC-223ENST00000556142 ORAI2Q96SN7 254 aa12.44□□□□□ -0.42
HNRNPC-223ENST00000556142 PNNQ9H307 717 aaKnown RBP12.44□□□□□ -0.42
HNRNPC-223ENST00000556142 TRIM35Q9UPQ4 493 aa12.44□□□□□ -0.42
HNRNPC-223ENST00000556142 C1orf167Q5SNV9 1468 aa12.43□□□□□ -0.42
HNRNPC-223ENST00000556142 ESCO1Q5FWF5 840 aa12.43□□□□□ -0.42
HNRNPC-223ENST00000556142 ADAMTS2O95450 1211 aa12.43□□□□□ -0.42
HNRNPC-223ENST00000556142 EIF4A2Q14240 407 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-223ENST00000556142 MAP3K19Q56UN5 1328 aa12.42□□□□□ -0.42
HNRNPC-223ENST00000556142 NLRP6P59044 892 aa12.42□□□□□ -0.42
HNRNPC-223ENST00000556142 NEUROD2Q15784 382 aa12.42□□□□□ -0.42
HNRNPC-223ENST00000556142 DDX17Q92841 729 aaKnown RBP12.42□□□□□ -0.42
HNRNPC-223ENST00000556142 PRKAR2BP31323 418 aa12.41□□□□□ -0.42
HNRNPC-223ENST00000556142 HSP90AB2PQ58FF8 381 aa12.41□□□□□ -0.42
HNRNPC-223ENST00000556142 ABTB2Q8N961 1025 aa12.41□□□□□ -0.42
HNRNPC-223ENST00000556142 PPP4R2Q9NY27 417 aa12.41□□□□□ -0.42
HNRNPC-223ENST00000556142 USP21Q9UK80 565 aa12.41□□□□□ -0.42
HNRNPC-223ENST00000556142 SBNO1A3KN83 1393 aa12.41□□□□□ -0.42
HNRNPC-223ENST00000556142 HMOX1P09601 288 aa12.4□□□□□ -0.42
HNRNPC-223ENST00000556142 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
HNRNPC-223ENST00000556142 TRPC5Q9UL62 973 aaPredicted RBP12.4□□□□□ -0.42
HNRNPC-223ENST00000556142 KIF24Q5T7B8 1368 aa12.4□□□□□ -0.42
HNRNPC-223ENST00000556142 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.42
HNRNPC-223ENST00000556142 PSME1Q06323 249 aa12.39□□□□□ -0.43
HNRNPC-223ENST00000556142 CCDC125Q86Z20 511 aa12.39□□□□□ -0.43
HNRNPC-223ENST00000556142 MAPK8IP3Q9UPT6 1336 aa12.39□□□□□ -0.43
HNRNPC-223ENST00000556142 FLT4P35916 1363 aa12.39□□□□□ -0.43
HNRNPC-223ENST00000556142 RIPK4P57078 832 aa12.39□□□□□ -0.43
HNRNPC-223ENST00000556142 NUTM2GQ5VZR2 741 aa12.39□□□□□ -0.43
HNRNPC-223ENST00000556142 U3KPZ7 1027 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-223ENST00000556142 IL16Q14005 1332 aa12.38□□□□□ -0.43
HNRNPC-223ENST00000556142 FOXO3O43524 673 aa12.38□□□□□ -0.43
HNRNPC-223ENST00000556142 PAK3O75914 559 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-223ENST00000556142 NFE2L2Q16236 605 aa12.38□□□□□ -0.43
HNRNPC-223ENST00000556142 TRPM3Q9HCF6 1732 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-223ENST00000556142 NFAT5O94916 1531 aa12.37□□□□□ -0.43
HNRNPC-223ENST00000556142 SOX12O15370 315 aa12.37□□□□□ -0.43
HNRNPC-223ENST00000556142 HOXC9P31274 260 aa12.37□□□□□ -0.43
HNRNPC-223ENST00000556142 KRT28Q7Z3Y7 464 aa12.37□□□□□ -0.43
HNRNPC-223ENST00000556142 KIF1AQ12756 1690 aa12.37□□□□□ -0.43
HNRNPC-223ENST00000556142 AEBP1Q8IUX7 1158 aa12.36□□□□□ -0.43
HNRNPC-223ENST00000556142 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
HNRNPC-223ENST00000556142 EP400Q96L91 3159 aa12.36□□□□□ -0.43
HNRNPC-223ENST00000556142 SLIT3O75094 1523 aa12.36□□□□□ -0.43
HNRNPC-223ENST00000556142 ATRNO75882 1429 aa12.36□□□□□ -0.43
HNRNPC-223ENST00000556142 ARHGEF10O15013 1369 aa12.36□□□□□ -0.43
HNRNPC-223ENST00000556142 PLIN1O60240 522 aa12.35□□□□□ -0.43
HNRNPC-223ENST00000556142 SULT6B1Q6IMI4 303 aa12.35□□□□□ -0.43
HNRNPC-223ENST00000556142 KDRP35968 1356 aa12.35□□□□□ -0.43
HNRNPC-223ENST00000556142 USP19O94966 1318 aa12.35□□□□□ -0.43
HNRNPC-223ENST00000556142 IGSF1Q8N6C5 1336 aa12.35□□□□□ -0.43
HNRNPC-223ENST00000556142 AMPHP49418 695 aa12.35□□□□□ -0.43
HNRNPC-223ENST00000556142 RTL1A6NKG5 1358 aa12.34□□□□□ -0.43
HNRNPC-223ENST00000556142 XPCQ01831 940 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-223ENST00000556142 KCNH5Q8NCM2 988 aa12.34□□□□□ -0.43
HNRNPC-223ENST00000556142 EXOC6Q8TAG9 804 aa12.34□□□□□ -0.43
HNRNPC-223ENST00000556142 IP6K1Q92551 441 aa12.34□□□□□ -0.43
HNRNPC-223ENST00000556142 EYA1Q99502 592 aa12.34□□□□□ -0.43
HNRNPC-223ENST00000556142 MYH16Q9H6N6 1097 aa12.34□□□□□ -0.43
HNRNPC-223ENST00000556142 SOS2Q07890 1332 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-223ENST00000556142 FANCIQ9NVI1 1328 aa12.33□□□□□ -0.44
HNRNPC-223ENST00000556142 BCAR3O75815 825 aa12.33□□□□□ -0.44
HNRNPC-223ENST00000556142 NEFMP07197 916 aa12.32□□□□□ -0.44
HNRNPC-223ENST00000556142 ZNF853P0CG23 659 aa12.32□□□□□ -0.44
HNRNPC-223ENST00000556142 RARSP54136 660 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-223ENST00000556142 C20orf194Q5TEA3 1177 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms