RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 ZC3H4Q9UPT8 1303 aaKnown RBP11.4□□□□□ -0.58
SEC23A-209ENST00000555363 WIPF1O43516 503 aa11.4□□□□□ -0.58
SEC23A-209ENST00000555363 PTK2Q05397 1052 aa11.4□□□□□ -0.58
SEC23A-209ENST00000555363 NEUROD2Q15784 382 aa11.4□□□□□ -0.58
SEC23A-209ENST00000555363 NPAS3Q8IXF0 933 aa11.4□□□□□ -0.58
SEC23A-209ENST00000555363 IRF7Q92985 503 aa11.4□□□□□ -0.58
SEC23A-209ENST00000555363 PCMTD1Q96MG8 357 aaPredicted RBP11.4□□□□□ -0.58
SEC23A-209ENST00000555363 SOBPA7XYQ1 873 aa11.39□□□□□ -0.59
SEC23A-209ENST00000555363 FBXO31Q5XUX0 539 aaPredicted RBP11.39□□□□□ -0.59
SEC23A-209ENST00000555363 LINC00528Q8N1L1 170 aa11.39□□□□□ -0.59
SEC23A-209ENST00000555363 PGPEP1Q9NXJ5 209 aa11.39□□□□□ -0.59
SEC23A-209ENST00000555363 CDV3Q9UKY7 258 aaKnown RBP11.39□□□□□ -0.59
SEC23A-209ENST00000555363 MEIOBQ8N635 442 aa11.38□□□□□ -0.59
SEC23A-209ENST00000555363 USP17L8P0C7I0 530 aa11.37□□□□□ -0.59
SEC23A-209ENST00000555363 KCTD15Q96SI1 283 aaPredicted RBP11.36□□□□□ -0.59
SEC23A-209ENST00000555363 H3BM21 787 aa11.35□□□□□ -0.59
SEC23A-209ENST00000555363 RFC5P40937 340 aa11.35□□□□□ -0.59
SEC23A-209ENST00000555363 PPP1R26Q5T8A7 1209 aaPredicted RBP11.35□□□□□ -0.59
SEC23A-209ENST00000555363 TSEN34Q9BSV6 310 aaKnown RBP11.35□□□□□ -0.59
SEC23A-209ENST00000555363 DHX9Q08211 1270 aaKnown RBP11.34□□□□□ -0.59
SEC23A-209ENST00000555363 STK17AQ9UEE5 414 aa11.34□□□□□ -0.59
SEC23A-209ENST00000555363 LCE2CQ5TA81 110 aa11.33□□□□□ -0.6
SEC23A-209ENST00000555363 IL27Q8NEV9 243 aa11.33□□□□□ -0.6
SEC23A-209ENST00000555363 GPSM3Q9Y4H4 160 aa11.33□□□□□ -0.6
SEC23A-209ENST00000555363 GMPRP36959 345 aa11.32□□□□□ -0.6
SEC23A-209ENST00000555363 ADAM32Q8TC27 787 aa11.32□□□□□ -0.6
SEC23A-209ENST00000555363 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
SEC23A-209ENST00000555363 HMX1Q9NP08 348 aaPredicted RBP11.32□□□□□ -0.6
SEC23A-209ENST00000555363 RAB15P59190 212 aa11.31□□□□□ -0.6
SEC23A-209ENST00000555363 DZIP3Q86Y13 1208 aaKnown RBP11.31□□□□□ -0.6
SEC23A-209ENST00000555363 CBLBQ13191 982 aa11.3□□□□□ -0.6
SEC23A-209ENST00000555363 NBPF20Q3BBV1 942 aa11.3□□□□□ -0.6
SEC23A-209ENST00000555363 GOPCQ9HD26 462 aa11.3□□□□□ -0.6
SEC23A-209ENST00000555363 TMEM259Q4ZIN3 620 aa11.29□□□□□ -0.6
SEC23A-209ENST00000555363 FAM181BA6NEQ2 426 aa11.28□□□□□ -0.6
SEC23A-209ENST00000555363 TTLL8A6PVC2 850 aa11.28□□□□□ -0.6
SEC23A-209ENST00000555363 INTS6LQ5JSJ4 861 aaKnown RBP11.28□□□□□ -0.6
SEC23A-209ENST00000555363 SOS2Q07890 1332 aaPredicted RBP11.28□□□□□ -0.6
SEC23A-209ENST00000555363 ERBB4Q15303 1308 aa11.27□□□□□ -0.61
SEC23A-209ENST00000555363 FIGNL2A6NMB9 653 aa11.26□□□□□ -0.61
SEC23A-209ENST00000555363 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.26□□□□□ -0.61
SEC23A-209ENST00000555363 DNMT3LQ9UJW3 386 aa11.26□□□□□ -0.61
SEC23A-209ENST00000555363 OCSTAMPQ9BR26 566 aa11.25□□□□□ -0.61
SEC23A-209ENST00000555363 RELBQ01201 579 aa11.24□□□□□ -0.61
SEC23A-209ENST00000555363 Q6ZVU0 165 aa11.24□□□□□ -0.61
SEC23A-209ENST00000555363 ZSCAN1Q8NBB4 408 aa11.24□□□□□ -0.61
SEC23A-209ENST00000555363 AGBL1Q96MI9 1066 aa11.23□□□□□ -0.61
SEC23A-209ENST00000555363 PPFIA3O75145 1194 aa11.22□□□□□ -0.61
SEC23A-209ENST00000555363 TMPRSS4Q9NRS4 437 aa11.22□□□□□ -0.61
SEC23A-209ENST00000555363 SPINT1O43278 529 aa11.21□□□□□ -0.61
SEC23A-209ENST00000555363 TRIM52Q96A61 297 aa11.21□□□□□ -0.61
SEC23A-209ENST00000555363 POLMQ9NP87 494 aaPredicted RBP11.21□□□□□ -0.61
SEC23A-209ENST00000555363 TRIM34Q9BYJ4 488 aa11.2□□□□□ -0.62
SEC23A-209ENST00000555363 PCDHB9Q9Y5E1 797 aa11.2□□□□□ -0.62
SEC23A-209ENST00000555363 BRPF1P55201 1214 aaPredicted RBP11.19□□□□□ -0.62
SEC23A-209ENST00000555363 ZNF784Q8NCA9 323 aaPredicted RBP11.19□□□□□ -0.62
SEC23A-209ENST00000555363 ZBBXA8MT70 800 aa11.18□□□□□ -0.62
SEC23A-209ENST00000555363 ERVH48-1M5A8F1 160 aa11.18□□□□□ -0.62
SEC23A-209ENST00000555363 ZNF395Q9H8N7 513 aaPredicted RBP11.18□□□□□ -0.62
SEC23A-209ENST00000555363 VSIG8P0DPA2 414 aa11.17□□□□□ -0.62
SEC23A-209ENST00000555363 PTSQ03393 145 aa11.17□□□□□ -0.62
SEC23A-209ENST00000555363 INSM2Q96T92 566 aaPredicted RBP11.17□□□□□ -0.62
SEC23A-209ENST00000555363 ADH1AP07327 375 aa11.15□□□□□ -0.62
SEC23A-209ENST00000555363 CTSOP43234 321 aaPredicted RBP11.15□□□□□ -0.62
SEC23A-209ENST00000555363 SEPT12Q8IYM1 358 aa11.14□□□□□ -0.63
SEC23A-209ENST00000555363 CYLDQ9NQC7 956 aa11.14□□□□□ -0.63
SEC23A-209ENST00000555363 GJD4Q96KN9 370 aaPredicted RBP11.13□□□□□ -0.63
SEC23A-209ENST00000555363 ZNF330Q9Y3S2 320 aaPredicted RBP11.13□□□□□ -0.63
SEC23A-209ENST00000555363 ESPNB1AK53 854 aa11.12□□□□□ -0.63
SEC23A-209ENST00000555363 APBB1O00213 710 aa11.12□□□□□ -0.63
SEC23A-209ENST00000555363 FBXO45P0C2W1 286 aa11.12□□□□□ -0.63
SEC23A-209ENST00000555363 CCDC155Q8N6L0 562 aa11.12□□□□□ -0.63
SEC23A-209ENST00000555363 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
SEC23A-209ENST00000555363 PTGIRP43119 386 aa11.11□□□□□ -0.63
SEC23A-209ENST00000555363 BANK1Q8NDB2 785 aa11.11□□□□□ -0.63
SEC23A-209ENST00000555363 ZNF592Q92610 1267 aa11.11□□□□□ -0.63
SEC23A-209ENST00000555363 CDC14CA4D256 554 aa11.1□□□□□ -0.63
SEC23A-209ENST00000555363 LILRA1O75019 489 aa11.1□□□□□ -0.63
SEC23A-209ENST00000555363 ADD1P35611 737 aaKnown RBP11.1□□□□□ -0.63
SEC23A-209ENST00000555363 RNF20Q5VTR2 975 aa11.1□□□□□ -0.63
SEC23A-209ENST00000555363 ESF1Q9H501 851 aaKnown RBP11.1□□□□□ -0.63
SEC23A-209ENST00000555363 NDUFB9Q9Y6M9 179 aa11.09□□□□□ -0.63
SEC23A-209ENST00000555363 NR1H3Q13133 447 aa11.08□□□□□ -0.64
SEC23A-209ENST00000555363 RNF217Q8TC41 542 aa11.08□□□□□ -0.64
SEC23A-209ENST00000555363 SLC35F4A4IF30 521 aa11.07□□□□□ -0.64
SEC23A-209ENST00000555363 LORP23490 312 aaPredicted RBP11.07□□□□□ -0.64
SEC23A-209ENST00000555363 MCCD1P59942 119 aaPredicted RBP11.07□□□□□ -0.64
SEC23A-209ENST00000555363 CNTNAP3BQ96NU0 1288 aa11.07□□□□□ -0.64
SEC23A-209ENST00000555363 CNTNAP3Q9BZ76 1288 aa11.07□□□□□ -0.64
SEC23A-209ENST00000555363 ATP5J2-PTCD1G3V325 749 aa11.06□□□□□ -0.64
SEC23A-209ENST00000555363 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
SEC23A-209ENST00000555363 MEN1O00255 615 aa11.05□□□□□ -0.64
SEC23A-209ENST00000555363 ITGA6P23229 1130 aa11.05□□□□□ -0.64
SEC23A-209ENST00000555363 SV2AQ7L0J3 742 aa11.05□□□□□ -0.64
SEC23A-209ENST00000555363 LYSMD3Q7Z3D4 306 aa11.05□□□□□ -0.64
SEC23A-209ENST00000555363 FOXD4L5Q5VV16 416 aaPredicted RBP11.04□□□□□ -0.64
SEC23A-209ENST00000555363 VWA5B2Q8N398 1253 aa11.04□□□□□ -0.64
SEC23A-209ENST00000555363 GPR161Q8N6U8 529 aaKnown RBP11.04□□□□□ -0.64
SEC23A-209ENST00000555363 CC2D2BQ6DHV5 1058 aa11.03□□□□□ -0.64
SEC23A-209ENST00000555363 PRICKLE2Q7Z3G6 844 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms