RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 IPO8O15397 1037 aaKnown RBP27.2■■□□□ 1.94
ARHGEF40-204ENST00000555038 C8orf34Q49A92 452 aa27.2■■□□□ 1.94
ARHGEF40-204ENST00000555038 RWDD1Q9H446 243 aaPredicted RBP27.2■■□□□ 1.94
ARHGEF40-204ENST00000555038 AMOTL2Q9Y2J4 779 aa27.2■■□□□ 1.94
ARHGEF40-204ENST00000555038 SSH2Q76I76 1423 aa27.19■■□□□ 1.94
ARHGEF40-204ENST00000555038 ATF7IPQ6VMQ6 1270 aa27.19■■□□□ 1.94
ARHGEF40-204ENST00000555038 NPM2Q86SE8 214 aaKnown RBP27.19■■□□□ 1.94
ARHGEF40-204ENST00000555038 SLC26A8Q96RN1 970 aa27.19■■□□□ 1.94
ARHGEF40-204ENST00000555038 XRN1Q8IZH2 1706 aaKnown RBP27.18■■□□□ 1.94
ARHGEF40-204ENST00000555038 USP31Q70CQ4 1352 aa27.18■■□□□ 1.94
ARHGEF40-204ENST00000555038 PIK3R4Q99570 1358 aa27.18■■□□□ 1.94
ARHGEF40-204ENST00000555038 PAK3O75914 559 aaPredicted RBP27.18■■□□□ 1.94
ARHGEF40-204ENST00000555038 IFT57Q9NWB7 429 aa27.18■■□□□ 1.94
ARHGEF40-204ENST00000555038 TTC21AQ8NDW8 1320 aa27.18■■□□□ 1.94
ARHGEF40-204ENST00000555038 GNAI1P63096 354 aa27.17■■□□□ 1.94
ARHGEF40-204ENST00000555038 DDX19BQ9UMR2 479 aa27.17■■□□□ 1.94
ARHGEF40-204ENST00000555038 HMOX1P09601 288 aa27.17■■□□□ 1.94
ARHGEF40-204ENST00000555038 RGS3P49796 1198 aa27.17■■□□□ 1.94
ARHGEF40-204ENST00000555038 PHACTR3Q96KR7 559 aa27.17■■□□□ 1.94
ARHGEF40-204ENST00000555038 TNNQ9UQP3 1299 aa27.17■■□□□ 1.94
ARHGEF40-204ENST00000555038 VIRMAQ69YN4 1812 aaKnown RBP27.16■■□□□ 1.94
ARHGEF40-204ENST00000555038 PCDHB15Q9Y5E8 787 aa27.16■■□□□ 1.94
ARHGEF40-204ENST00000555038 TRIM27P14373 513 aa27.15■■□□□ 1.94
ARHGEF40-204ENST00000555038 RRS1Q15050 365 aaKnown RBP27.14■■□□□ 1.94
ARHGEF40-204ENST00000555038 ANKARQ7Z5J8 1434 aa27.13■■□□□ 1.93
ARHGEF40-204ENST00000555038 ZNF853P0CG23 659 aa27.12■■□□□ 1.93
ARHGEF40-204ENST00000555038 NOB1Q9ULX3 412 aaKnown RBP27.11■■□□□ 1.93
ARHGEF40-204ENST00000555038 CEP170BQ9Y4F5 1589 aaPredicted RBP27.11■■□□□ 1.93
ARHGEF40-204ENST00000555038 DLG5Q8TDM6 1919 aa27.1■■□□□ 1.93
ARHGEF40-204ENST00000555038 HDAC1Q13547 482 aaPredicted RBP27.08■■□□□ 1.93
ARHGEF40-204ENST00000555038 ARHGAP45Q92619 1136 aa27.08■■□□□ 1.93
ARHGEF40-204ENST00000555038 CFAP44Q96MT7 982 aa27.08■■□□□ 1.93
ARHGEF40-204ENST00000555038 RGPD1P0DJD0 1748 aa27.08■■□□□ 1.93
ARHGEF40-204ENST00000555038 EIF4A2Q14240 407 aaKnown RBP27.07■■□□□ 1.92
ARHGEF40-204ENST00000555038 CHMP4BQ9H444 224 aaKnown RBP27.07■■□□□ 1.92
ARHGEF40-204ENST00000555038 ITPRIPQ8IWB1 547 aa27.05■■□□□ 1.92
ARHGEF40-204ENST00000555038 PEAK1Q9H792 1746 aa27.05■■□□□ 1.92
ARHGEF40-204ENST00000555038 VAMP4O75379 141 aa27.04■■□□□ 1.92
ARHGEF40-204ENST00000555038 LAS1LQ9Y4W2 734 aaKnown RBP27.04■■□□□ 1.92
ARHGEF40-204ENST00000555038 PDZRN3Q9UPQ7 1066 aa27.03■■□□□ 1.92
ARHGEF40-204ENST00000555038 ARHGEF10O15013 1369 aa27.03■■□□□ 1.92
ARHGEF40-204ENST00000555038 MBIPQ9NS73 344 aa27.02■■□□□ 1.92
ARHGEF40-204ENST00000555038 FMN2Q9NZ56 1722 aa27.02■■□□□ 1.92
ARHGEF40-204ENST00000555038 USP54Q70EL1 1684 aa27.02■■□□□ 1.92
ARHGEF40-204ENST00000555038 HAP1P54257 671 aaPredicted RBP27.02■■□□□ 1.92
ARHGEF40-204ENST00000555038 TMEM57Q8N5G2 664 aa27.02■■□□□ 1.92
ARHGEF40-204ENST00000555038 ZNF142P52746 1687 aaPredicted RBP27.01■■□□□ 1.91
ARHGEF40-204ENST00000555038 SBNO1A3KN83 1393 aa27.01■■□□□ 1.91
ARHGEF40-204ENST00000555038 NUTM2FA1L443 756 aa27.01■■□□□ 1.91
ARHGEF40-204ENST00000555038 ZBTB40Q9NUA8 1239 aa27.01■■□□□ 1.91
ARHGEF40-204ENST00000555038 MRPL50Q8N5N7 158 aaKnown RBP27■■□□□ 1.91
ARHGEF40-204ENST00000555038 NGDNQ8NEJ9 315 aaKnown RBP27■■□□□ 1.91
ARHGEF40-204ENST00000555038 FLT4P35916 1363 aa27■■□□□ 1.91
ARHGEF40-204ENST00000555038 KIF24Q5T7B8 1368 aa27■■□□□ 1.91
ARHGEF40-204ENST00000555038 SULT6B1Q6IMI4 303 aa26.99■■□□□ 1.91
ARHGEF40-204ENST00000555038 THUMPD2Q9BTF0 503 aaKnown RBP26.99■■□□□ 1.91
ARHGEF40-204ENST00000555038 RGPD8O14715 1765 aaPredicted RBP26.97■■□□□ 1.91
ARHGEF40-204ENST00000555038 PIK3C2AO00443 1686 aa26.97■■□□□ 1.91
ARHGEF40-204ENST00000555038 TWISTNBQ3B726 338 aaPredicted RBP26.97■■□□□ 1.91
ARHGEF40-204ENST00000555038 PLPPR3Q6T4P5 718 aa26.96■■□□□ 1.91
ARHGEF40-204ENST00000555038 HSP90AB2PQ58FF8 381 aa26.95■■□□□ 1.9
ARHGEF40-204ENST00000555038 SMC5Q8IY18 1101 aa26.95■■□□□ 1.9
ARHGEF40-204ENST00000555038 MAP3K19Q56UN5 1328 aa26.95■■□□□ 1.9
ARHGEF40-204ENST00000555038 KCNA6P17658 529 aa26.94■■□□□ 1.9
ARHGEF40-204ENST00000555038 AEBP1Q8IUX7 1158 aa26.94■■□□□ 1.9
ARHGEF40-204ENST00000555038 TSPYL6Q8N831 410 aa26.93■■□□□ 1.9
ARHGEF40-204ENST00000555038 KDRP35968 1356 aa26.93■■□□□ 1.9
ARHGEF40-204ENST00000555038 CHD2O14647 1828 aaKnown RBP26.93■■□□□ 1.9
ARHGEF40-204ENST00000555038 KIAA0232Q92628 1395 aa26.92■■□□□ 1.9
ARHGEF40-204ENST00000555038 ABCC4O15439 1325 aa26.92■■□□□ 1.9
ARHGEF40-204ENST00000555038 API5Q9BZZ5 524 aaKnown RBP26.92■■□□□ 1.9
ARHGEF40-204ENST00000555038 ANKLE2Q86XL3 938 aa26.92■■□□□ 1.9
ARHGEF40-204ENST00000555038 DAXXQ9UER7 740 aaPredicted RBP26.91■■□□□ 1.9
ARHGEF40-204ENST00000555038 FAM83GA6ND36 823 aa26.89■■□□□ 1.9
ARHGEF40-204ENST00000555038 CHL1O00533 1208 aa26.89■■□□□ 1.9
ARHGEF40-204ENST00000555038 C8orf58Q8NAV2 365 aa26.89■■□□□ 1.89
ARHGEF40-204ENST00000555038 IGSF1Q8N6C5 1336 aa26.87■■□□□ 1.89
ARHGEF40-204ENST00000555038 ADAMTSL3P82987 1691 aa26.87■■□□□ 1.89
ARHGEF40-204ENST00000555038 ZBTB7BO15156 539 aaPredicted RBP26.87■■□□□ 1.89
ARHGEF40-204ENST00000555038 USP19O94966 1318 aa26.87■■□□□ 1.89
ARHGEF40-204ENST00000555038 UPF2Q9HAU5 1272 aaKnown RBP26.86■■□□□ 1.89
ARHGEF40-204ENST00000555038 MARF1Q9Y4F3 1742 aaKnown RBP26.86■■□□□ 1.89
ARHGEF40-204ENST00000555038 AMPHP49418 695 aa26.86■■□□□ 1.89
ARHGEF40-204ENST00000555038 USP35Q9P2H5 1018 aa26.86■■□□□ 1.89
ARHGEF40-204ENST00000555038 DCTN1Q14203 1278 aa26.85■■□□□ 1.89
ARHGEF40-204ENST00000555038 CRB1P82279 1406 aa26.85■■□□□ 1.89
ARHGEF40-204ENST00000555038 RTL5Q5HYW3 569 aaPredicted RBP26.84■■□□□ 1.89
ARHGEF40-204ENST00000555038 NLRP6P59044 892 aa26.84■■□□□ 1.89
ARHGEF40-204ENST00000555038 GAS2L2Q8NHY3 880 aa26.84■■□□□ 1.89
ARHGEF40-204ENST00000555038 SETD1BQ9UPS6 1966 aaKnown RBP26.83■■□□□ 1.89
ARHGEF40-204ENST00000555038 RTL1A6NKG5 1358 aa26.83■■□□□ 1.89
ARHGEF40-204ENST00000555038 HTATSF1O43719 755 aaKnown RBP26.83■■□□□ 1.89
ARHGEF40-204ENST00000555038 NBR1Q14596 966 aa26.83■■□□□ 1.89
ARHGEF40-204ENST00000555038 ELL2O00472 640 aaPredicted RBP26.82■■□□□ 1.88
ARHGEF40-204ENST00000555038 NUCB1Q02818 461 aa26.82■■□□□ 1.88
ARHGEF40-204ENST00000555038 GCC1Q96CN9 775 aa26.82■■□□□ 1.88
ARHGEF40-204ENST00000555038 SOX12O15370 315 aa26.8■■□□□ 1.88
ARHGEF40-204ENST00000555038 ADGRL3Q9HAR2 1447 aa26.79■■□□□ 1.88
ARHGEF40-204ENST00000555038 RTF1Q92541 710 aaKnown RBP26.79■■□□□ 1.88
ARHGEF40-204ENST00000555038 EYA1Q99502 592 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms