RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 COG6Q9Y2V7 657 aa6.48□□□□□ -1.37
SCFD1-213ENST00000554776 NBPF20Q3BBV1 942 aa6.47□□□□□ -1.37
SCFD1-213ENST00000554776 DZIP3Q86Y13 1208 aaKnown RBP6.47□□□□□ -1.37
SCFD1-213ENST00000554776 ESPNB1AK53 854 aa6.46□□□□□ -1.38
SCFD1-213ENST00000554776 TIMP2P16035 220 aa6.46□□□□□ -1.38
SCFD1-213ENST00000554776 ABL2P42684 1182 aa6.46□□□□□ -1.38
SCFD1-213ENST00000554776 ZNF330Q9Y3S2 320 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-213ENST00000554776 PCDHB9Q9Y5E1 797 aa6.46□□□□□ -1.38
SCFD1-213ENST00000554776 WDR4P57081 412 aaKnown RBP6.45□□□□□ -1.38
SCFD1-213ENST00000554776 MCCD1P59942 119 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-213ENST00000554776 INTS6LQ5JSJ4 861 aaKnown RBP6.45□□□□□ -1.38
SCFD1-213ENST00000554776 CCDC116Q8IYX3 515 aa6.45□□□□□ -1.38
SCFD1-213ENST00000554776 ZNF592Q92610 1267 aa6.45□□□□□ -1.38
SCFD1-213ENST00000554776 POM121Q96HA1 1249 aa6.45□□□□□ -1.38
SCFD1-213ENST00000554776 DACH1Q9UI36 760 aa6.45□□□□□ -1.38
SCFD1-213ENST00000554776 CAPN5O15484 640 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-213ENST00000554776 UBTFP17480 764 aaKnown RBP6.44□□□□□ -1.38
SCFD1-213ENST00000554776 ITPKCQ96DU7 683 aa6.44□□□□□ -1.38
SCFD1-213ENST00000554776 EMILIN1Q9Y6C2 1016 aa6.44□□□□□ -1.38
SCFD1-213ENST00000554776 ZIC2O95409 532 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-213ENST00000554776 DHX9Q08211 1270 aaKnown RBP6.43□□□□□ -1.38
SCFD1-213ENST00000554776 WASHC4Q2M389 1173 aa6.43□□□□□ -1.38
SCFD1-213ENST00000554776 PPP1R26Q5T8A7 1209 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-213ENST00000554776 SEPT12Q8IYM1 358 aa6.43□□□□□ -1.38
SCFD1-213ENST00000554776 ZFAND3Q9H8U3 227 aa6.43□□□□□ -1.38
SCFD1-213ENST00000554776 ATP13A2Q9NQ11 1180 aa6.43□□□□□ -1.38
SCFD1-213ENST00000554776 TIMELESSQ9UNS1 1208 aa6.43□□□□□ -1.38
SCFD1-213ENST00000554776 RAD21O60216 631 aa6.42□□□□□ -1.38
SCFD1-213ENST00000554776 GIGYF1O75420 1035 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-213ENST00000554776 EIF4G2P78344 907 aaKnown RBP eCLIP6.42□□□□□ -1.38
SCFD1-213ENST00000554776 VAC14Q08AM6 782 aa6.42□□□□□ -1.38
SCFD1-213ENST00000554776 TRIM46Q7Z4K8 759 aa6.41□□□□□ -1.38
SCFD1-213ENST00000554776 PGPEP1Q9NXJ5 209 aa6.41□□□□□ -1.38
SCFD1-213ENST00000554776 ERVH48-1M5A8F1 160 aa6.4□□□□□ -1.38
SCFD1-213ENST00000554776 BMP1P13497 986 aa6.4□□□□□ -1.38
SCFD1-213ENST00000554776 RAB15P59190 212 aa6.4□□□□□ -1.38
SCFD1-213ENST00000554776 CCDC125Q86Z20 511 aa6.4□□□□□ -1.38
SCFD1-213ENST00000554776 WWC1Q8IX03 1113 aa6.4□□□□□ -1.38
SCFD1-213ENST00000554776 CLUAP1Q96AJ1 413 aa6.4□□□□□ -1.38
SCFD1-213ENST00000554776 CEP126Q9P2H0 1117 aa6.4□□□□□ -1.38
SCFD1-213ENST00000554776 POTECB2RU33 542 aa6.39□□□□□ -1.39
SCFD1-213ENST00000554776 SOX11P35716 441 aa6.39□□□□□ -1.39
SCFD1-213ENST00000554776 RNF20Q5VTR2 975 aa6.39□□□□□ -1.39
SCFD1-213ENST00000554776 MRPL14Q6P1L8 145 aaKnown RBP6.39□□□□□ -1.39
SCFD1-213ENST00000554776 Q6ZVU0 165 aa6.39□□□□□ -1.39
SCFD1-213ENST00000554776 MEIOBQ8N635 442 aa6.39□□□□□ -1.39
SCFD1-213ENST00000554776 TMPRSS4Q9NRS4 437 aa6.39□□□□□ -1.39
SCFD1-213ENST00000554776 GMPR2Q9P2T1 348 aaKnown RBP6.39□□□□□ -1.39
SCFD1-213ENST00000554776 ZNF787Q6DD87 383 aa6.38□□□□□ -1.39
SCFD1-213ENST00000554776 ZNF784Q8NCA9 323 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-213ENST00000554776 SENP2Q9HC62 589 aa6.38□□□□□ -1.39
SCFD1-213ENST00000554776 A6NJR5 290 aa6.37□□□□□ -1.39
SCFD1-213ENST00000554776 LILRA1O75019 489 aa6.37□□□□□ -1.39
SCFD1-213ENST00000554776 CBLBQ13191 982 aa6.37□□□□□ -1.39
SCFD1-213ENST00000554776 PROSER2Q86WR7 435 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-213ENST00000554776 PHTF2Q8N3S3 785 aa6.37□□□□□ -1.39
SCFD1-213ENST00000554776 FNBP4Q8N3X1 1017 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-213ENST00000554776 TRIM47Q96LD4 638 aa6.37□□□□□ -1.39
SCFD1-213ENST00000554776 SEMA3FQ13275 785 aa6.36□□□□□ -1.39
SCFD1-213ENST00000554776 LINC00528Q8N1L1 170 aa6.36□□□□□ -1.39
SCFD1-213ENST00000554776 TRIM52Q96A61 297 aa6.36□□□□□ -1.39
SCFD1-213ENST00000554776 KIFC2Q96AC6 838 aa6.36□□□□□ -1.39
SCFD1-213ENST00000554776 ZFP42Q96MM3 310 aa6.36□□□□□ -1.39
SCFD1-213ENST00000554776 ALG2Q9H553 416 aa6.36□□□□□ -1.39
SCFD1-213ENST00000554776 POM121CA8CG34 1229 aa6.35□□□□□ -1.39
SCFD1-213ENST00000554776 ADD1P35611 737 aaKnown RBP6.35□□□□□ -1.39
SCFD1-213ENST00000554776 ERVK-9P63128 1117 aa6.35□□□□□ -1.39
SCFD1-213ENST00000554776 SCARF1Q14162 830 aa6.35□□□□□ -1.39
SCFD1-213ENST00000554776 CCDC85AQ96PX6 553 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-213ENST00000554776 PURBQ96QR8 312 aaKnown RBP6.35□□□□□ -1.39
SCFD1-213ENST00000554776 TSEN34Q9BSV6 310 aaKnown RBP6.35□□□□□ -1.39
SCFD1-213ENST00000554776 CYLDQ9NQC7 956 aa6.35□□□□□ -1.39
SCFD1-213ENST00000554776 CHIC2Q9UKJ5 165 aa6.35□□□□□ -1.39
SCFD1-213ENST00000554776 PCDHB11Q9Y5F2 797 aa6.35□□□□□ -1.39
SCFD1-213ENST00000554776 C11orf95C9JLR9 678 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-213ENST00000554776 UPP2O95045 317 aa6.34□□□□□ -1.39
SCFD1-213ENST00000554776 ADH1AP07327 375 aa6.34□□□□□ -1.39
SCFD1-213ENST00000554776 SNRPBP14678 240 aaKnown RBP6.34□□□□□ -1.39
SCFD1-213ENST00000554776 SLFNL1Q499Z3 407 aa6.34□□□□□ -1.39
SCFD1-213ENST00000554776 CC2D2BQ6DHV5 1058 aa6.34□□□□□ -1.39
SCFD1-213ENST00000554776 C14orf37Q86TY3 774 aa6.34□□□□□ -1.39
SCFD1-213ENST00000554776 SCTRP47872 440 aa6.33□□□□□ -1.4
SCFD1-213ENST00000554776 C6orf118Q5T5N4 469 aa6.33□□□□□ -1.4
SCFD1-213ENST00000554776 RNF135Q8IUD6 432 aa6.33□□□□□ -1.4
SCFD1-213ENST00000554776 KDF1Q8NAX2 398 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-213ENST00000554776 ADAMTS19Q8TE59 1207 aa6.33□□□□□ -1.4
SCFD1-213ENST00000554776 ZMYND15Q9H091 742 aa6.33□□□□□ -1.4
SCFD1-213ENST00000554776 SPINT1O43278 529 aa6.32□□□□□ -1.4
SCFD1-213ENST00000554776 BMP2P12643 396 aa6.32□□□□□ -1.4
SCFD1-213ENST00000554776 TSGA10IPQ3SY00 556 aa6.32□□□□□ -1.4
SCFD1-213ENST00000554776 AGBL1Q96MI9 1066 aa6.32□□□□□ -1.4
SCFD1-213ENST00000554776 CDCA7Q9BWT1 371 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-213ENST00000554776 TRAK2O60296 914 aa6.31□□□□□ -1.4
SCFD1-213ENST00000554776 RELBQ01201 579 aa6.31□□□□□ -1.4
SCFD1-213ENST00000554776 OSBPL3Q9H4L5 887 aa6.31□□□□□ -1.4
SCFD1-213ENST00000554776 DOLKQ9UPQ8 538 aa6.31□□□□□ -1.4
SCFD1-213ENST00000554776 SOS2Q07890 1332 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-213ENST00000554776 PIK3CDO00329 1044 aa6.3□□□□□ -1.4
SCFD1-213ENST00000554776 PTGIRP43119 386 aa6.3□□□□□ -1.4
SCFD1-213ENST00000554776 MAP7D1Q3KQU3 841 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms