RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 COL16A1Q07092 1604 aaPredicted RBP4.6□□□□□ -1.67
SEC23A-207ENST00000554615 ALDH1L2Q3SY69 923 aa4.6□□□□□ -1.67
SEC23A-207ENST00000554615 IPO9Q96P70 1041 aaKnown RBP4.6□□□□□ -1.67
SEC23A-207ENST00000554615 TRIM35Q9UPQ4 493 aa4.6□□□□□ -1.67
SEC23A-207ENST00000554615 DDX60LQ5H9U9 1706 aaKnown RBP4.6□□□□□ -1.67
SEC23A-207ENST00000554615 SALL3Q9BXA9 1300 aa4.6□□□□□ -1.67
SEC23A-207ENST00000554615 SPINK5Q9NQ38 1064 aaPredicted RBP4.6□□□□□ -1.67
SEC23A-207ENST00000554615 ADAMTS8Q9UP79 889 aa4.6□□□□□ -1.67
SEC23A-207ENST00000554615 QSER1Q2KHR3 1735 aa4.59□□□□□ -1.67
SEC23A-207ENST00000554615 PLEKHG3A1L390 1219 aa4.59□□□□□ -1.67
SEC23A-207ENST00000554615 WWC1Q8IX03 1113 aa4.59□□□□□ -1.67
SEC23A-207ENST00000554615 EPB41L2O43491 1005 aaKnown RBP4.59□□□□□ -1.68
SEC23A-207ENST00000554615 LRRC37AA6NMS7 1700 aa4.59□□□□□ -1.68
SEC23A-207ENST00000554615 CEMIPQ8WUJ3 1361 aa4.58□□□□□ -1.68
SEC23A-207ENST00000554615 BABAM1Q9NWV8 329 aa4.58□□□□□ -1.68
SEC23A-207ENST00000554615 RGPD3A6NKT7 1758 aaPredicted RBP4.58□□□□□ -1.68
SEC23A-207ENST00000554615 RGPD4Q7Z3J3 1758 aa4.58□□□□□ -1.68
SEC23A-207ENST00000554615 CHD4Q14839 1912 aa4.58□□□□□ -1.68
SEC23A-207ENST00000554615 METP08581 1390 aa4.58□□□□□ -1.68
SEC23A-207ENST00000554615 LAMB1P07942 1786 aa4.58□□□□□ -1.68
SEC23A-207ENST00000554615 RANGAP1P46060 587 aaPredicted RBP4.58□□□□□ -1.68
SEC23A-207ENST00000554615 SMC5Q8IY18 1101 aa4.58□□□□□ -1.68
SEC23A-207ENST00000554615 OSCARQ8IYS5 282 aa4.58□□□□□ -1.68
SEC23A-207ENST00000554615 PXDNQ92626 1479 aa4.58□□□□□ -1.68
SEC23A-207ENST00000554615 SCN7AQ01118 1682 aa4.58□□□□□ -1.68
SEC23A-207ENST00000554615 RUNDC1Q96C34 613 aa4.58□□□□□ -1.68
SEC23A-207ENST00000554615 RSPH6AQ9H0K4 717 aa4.58□□□□□ -1.68
SEC23A-207ENST00000554615 SBF2Q86WG5 1849 aa4.58□□□□□ -1.68
SEC23A-207ENST00000554615 RARSP54136 660 aaKnown RBP4.57□□□□□ -1.68
SEC23A-207ENST00000554615 CNKSR2Q8WXI2 1034 aa4.57□□□□□ -1.68
SEC23A-207ENST00000554615 HIRIP3Q9BW71 556 aaPredicted RBP4.57□□□□□ -1.68
SEC23A-207ENST00000554615 AHDC1Q5TGY3 1603 aaPredicted RBP4.57□□□□□ -1.68
SEC23A-207ENST00000554615 LY75O60449 1722 aa4.57□□□□□ -1.68
SEC23A-207ENST00000554615 EVC2Q86UK5 1308 aa4.57□□□□□ -1.68
SEC23A-207ENST00000554615 ZBTB22O15209 634 aa4.57□□□□□ -1.68
SEC23A-207ENST00000554615 RBM25P49756 843 aaKnown RBP4.57□□□□□ -1.68
SEC23A-207ENST00000554615 KCPQ6ZWJ8 1503 aa4.56□□□□□ -1.68
SEC23A-207ENST00000554615 VGFO15240 615 aaPredicted RBP4.56□□□□□ -1.68
SEC23A-207ENST00000554615 NPHP4O75161 1426 aaPredicted RBP4.56□□□□□ -1.68
SEC23A-207ENST00000554615 IL13P35225 146 aa4.56□□□□□ -1.68
SEC23A-207ENST00000554615 GOLGA2Q08379 1002 aa4.56□□□□□ -1.68
SEC23A-207ENST00000554615 CFAP70Q5T0N1 1121 aa4.56□□□□□ -1.68
SEC23A-207ENST00000554615 ROBO2Q9HCK4 1378 aa4.56□□□□□ -1.68
SEC23A-207ENST00000554615 MAPK8IP3Q9UPT6 1336 aa4.56□□□□□ -1.68
SEC23A-207ENST00000554615 SNX21Q969T3 373 aa4.56□□□□□ -1.68
SEC23A-207ENST00000554615 SNRKQ9NRH2 765 aa4.56□□□□□ -1.68
SEC23A-207ENST00000554615 COL14A1Q05707 1796 aaKnown RBP4.56□□□□□ -1.68
SEC23A-207ENST00000554615 MSH6P52701 1360 aa4.56□□□□□ -1.68
SEC23A-207ENST00000554615 LTBP1Q14766 1721 aa4.56□□□□□ -1.68
SEC23A-207ENST00000554615 USP42Q9H9J4 1324 aaKnown RBP4.55□□□□□ -1.68
SEC23A-207ENST00000554615 FSD2A1L4K1 749 aa4.55□□□□□ -1.68
SEC23A-207ENST00000554615 EXOC6Q8TAG9 804 aa4.55□□□□□ -1.68
SEC23A-207ENST00000554615 TNRQ92752 1358 aa4.55□□□□□ -1.68
SEC23A-207ENST00000554615 NEFLP07196 543 aa4.55□□□□□ -1.68
SEC23A-207ENST00000554615 AKAP11Q9UKA4 1901 aa4.55□□□□□ -1.68
SEC23A-207ENST00000554615 CDCA7LQ96GN5 454 aa4.55□□□□□ -1.68
SEC23A-207ENST00000554615 TAF1LQ8IZX4 1826 aa4.54□□□□□ -1.68
SEC23A-207ENST00000554615 FYB1O15117 783 aa4.54□□□□□ -1.68
SEC23A-207ENST00000554615 PDE4AP27815 886 aa4.54□□□□□ -1.68
SEC23A-207ENST00000554615 YTHDC1Q96MU7 727 aaKnown RBP4.54□□□□□ -1.68
SEC23A-207ENST00000554615 TNS2Q63HR2 1409 aa4.54□□□□□ -1.68
SEC23A-207ENST00000554615 TTC21AQ8NDW8 1320 aa4.54□□□□□ -1.68
SEC23A-207ENST00000554615 CDK5RAP2Q96SN8 1893 aa4.54□□□□□ -1.68
SEC23A-207ENST00000554615 IDI1Q13907 227 aa4.54□□□□□ -1.68
SEC23A-207ENST00000554615 TICAM2Q86XR7 235 aa4.54□□□□□ -1.68
SEC23A-207ENST00000554615 TBC1D32Q96NH3 1257 aa4.54□□□□□ -1.68
SEC23A-207ENST00000554615 KIF2CQ99661 725 aa4.54□□□□□ -1.68
SEC23A-207ENST00000554615 OSBPL3Q9H4L5 887 aa4.54□□□□□ -1.68
SEC23A-207ENST00000554615 ZBTB40Q9NUA8 1239 aa4.54□□□□□ -1.68
SEC23A-207ENST00000554615 C1orf167Q5SNV9 1468 aa4.54□□□□□ -1.68
SEC23A-207ENST00000554615 ATAD5Q96QE3 1844 aa4.53□□□□□ -1.68
SEC23A-207ENST00000554615 HTATSF1O43719 755 aaKnown RBP4.53□□□□□ -1.68
SEC23A-207ENST00000554615 FCHSD2O94868 740 aa4.53□□□□□ -1.68
SEC23A-207ENST00000554615 CYP2E1P05181 493 aaPredicted RBP4.53□□□□□ -1.68
SEC23A-207ENST00000554615 CRBNQ96SW2 442 aa4.53□□□□□ -1.68
SEC23A-207ENST00000554615 DUOX1Q9NRD9 1551 aa4.53□□□□□ -1.68
SEC23A-207ENST00000554615 PRR36Q9H6K5 1346 aa4.53□□□□□ -1.68
SEC23A-207ENST00000554615 FAM161AQ3B820 660 aa4.53□□□□□ -1.68
SEC23A-207ENST00000554615 C20orf194Q5TEA3 1177 aa4.53□□□□□ -1.68
SEC23A-207ENST00000554615 NOP58Q9Y2X3 529 aaKnown RBP4.53□□□□□ -1.68
SEC23A-207ENST00000554615 IGSF1Q8N6C5 1336 aa4.53□□□□□ -1.68
SEC23A-207ENST00000554615 NRXN2Q9P2S2 1712 aa4.53□□□□□ -1.68
SEC23A-207ENST00000554615 THSD7AQ9UPZ6 1657 aa4.52□□□□□ -1.69
SEC23A-207ENST00000554615 TMC1Q8TDI8 760 aa4.52□□□□□ -1.69
SEC23A-207ENST00000554615 KCNB2Q92953 911 aa4.52□□□□□ -1.69
SEC23A-207ENST00000554615 AOX1Q06278 1338 aa4.52□□□□□ -1.69
SEC23A-207ENST00000554615 KIF3BO15066 747 aa4.52□□□□□ -1.69
SEC23A-207ENST00000554615 RGS22Q8NE09 1264 aa4.52□□□□□ -1.69
SEC23A-207ENST00000554615 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.52□□□□□ -1.69
SEC23A-207ENST00000554615 IFT57Q9NWB7 429 aa4.52□□□□□ -1.69
SEC23A-207ENST00000554615 TTC21BQ7Z4L5 1316 aa4.52□□□□□ -1.69
SEC23A-207ENST00000554615 PLEKHG5O94827 1062 aa4.52□□□□□ -1.69
SEC23A-207ENST00000554615 IGHDP01880 384 aa4.52□□□□□ -1.69
SEC23A-207ENST00000554615 INTS3Q68E01 1043 aaKnown RBP4.52□□□□□ -1.69
SEC23A-207ENST00000554615 MVPQ14764 893 aaKnown RBP4.51□□□□□ -1.69
SEC23A-207ENST00000554615 UTYO14607 1347 aa4.51□□□□□ -1.69
SEC23A-207ENST00000554615 RBBP6Q7Z6E9 1792 aaKnown RBP4.51□□□□□ -1.69
SEC23A-207ENST00000554615 NUP98P52948 1817 aa4.51□□□□□ -1.69
SEC23A-207ENST00000554615 SLX4Q8IY92 1834 aa4.51□□□□□ -1.69
SEC23A-207ENST00000554615 PAK3O75914 559 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms