RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 COL5A2P05997 1499 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-213ENST00000554600 ONECUT3O60422 494 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-213ENST00000554600 WNK3Q9BYP7 1800 aa14.84□□□□□ -0.03
SHMT2-213ENST00000554600 USP31Q70CQ4 1352 aa14.84□□□□□ -0.03
SHMT2-213ENST00000554600 ANKRD36BQ8N2N9 1353 aa14.84□□□□□ -0.03
SHMT2-213ENST00000554600 CSB-PGBD3P0DP91 1061 aa14.83□□□□□ -0.04
SHMT2-213ENST00000554600 HSPA5P11021 654 aaKnown RBP14.83□□□□□ -0.04
SHMT2-213ENST00000554600 TOM1L2Q6ZVM7 507 aa14.82□□□□□ -0.04
SHMT2-213ENST00000554600 ARHGEF25Q86VW2 580 aa14.82□□□□□ -0.04
SHMT2-213ENST00000554600 CRB1P82279 1406 aa14.82□□□□□ -0.04
SHMT2-213ENST00000554600 TCP11L2Q8N4U5 519 aa14.81□□□□□ -0.04
SHMT2-213ENST00000554600 COG3Q96JB2 828 aa14.81□□□□□ -0.04
SHMT2-213ENST00000554600 RGPD1P0DJD0 1748 aa14.8□□□□□ -0.04
SHMT2-213ENST00000554600 PARP4Q9UKK3 1724 aaKnown RBP14.8□□□□□ -0.04
SHMT2-213ENST00000554600 EP400Q96L91 3159 aa14.8□□□□□ -0.04
SHMT2-213ENST00000554600 SF3B2Q13435 895 aaKnown RBP14.8□□□□□ -0.04
SHMT2-213ENST00000554600 FAM182BQ5T319 152 aa14.8□□□□□ -0.04
SHMT2-213ENST00000554600 AXIN2Q9Y2T1 843 aa14.8□□□□□ -0.04
SHMT2-213ENST00000554600 OVOS2A0A0J9YW53 1432 aa14.8□□□□□ -0.04
SHMT2-213ENST00000554600 OVOS2Q6IE36 1432 aa14.8□□□□□ -0.04
SHMT2-213ENST00000554600 ABCC6O95255 1503 aa14.78□□□□□ -0.04
SHMT2-213ENST00000554600 WDR17Q8IZU2 1322 aa14.78□□□□□ -0.04
SHMT2-213ENST00000554600 PDE3BQ13370 1112 aa14.78□□□□□ -0.04
SHMT2-213ENST00000554600 BARGINQ6ZT62 677 aa14.78□□□□□ -0.04
SHMT2-213ENST00000554600 CCDC125Q86Z20 511 aa14.78□□□□□ -0.04
SHMT2-213ENST00000554600 MAP2P11137 1827 aaKnown RBP14.78□□□□□ -0.04
SHMT2-213ENST00000554600 RGPD2P0DJD1 1756 aa14.78□□□□□ -0.04
SHMT2-213ENST00000554600 BLMP54132 1417 aaPredicted RBP14.77□□□□□ -0.04
SHMT2-213ENST00000554600 GGNBP2Q9H3C7 697 aa14.77□□□□□ -0.05
SHMT2-213ENST00000554600 THRAP3Q9Y2W1 955 aaKnown RBP14.77□□□□□ -0.05
SHMT2-213ENST00000554600 NSD3Q9BZ95 1437 aa14.76□□□□□ -0.05
SHMT2-213ENST00000554600 FAM208AQ9UK61 1670 aaKnown RBP14.76□□□□□ -0.05
SHMT2-213ENST00000554600 LRRC37A3O60309 1634 aa14.76□□□□□ -0.05
SHMT2-213ENST00000554600 AMPHP49418 695 aa14.75□□□□□ -0.05
SHMT2-213ENST00000554600 NLRP2Q9NX02 1062 aa14.75□□□□□ -0.05
SHMT2-213ENST00000554600 SBF2Q86WG5 1849 aa14.75□□□□□ -0.05
SHMT2-213ENST00000554600 TNS1Q9HBL0 1735 aaKnown RBP14.75□□□□□ -0.05
SHMT2-213ENST00000554600 ANKRD26Q9UPS8 1709 aa14.75□□□□□ -0.05
SHMT2-213ENST00000554600 FYB1O15117 783 aa14.74□□□□□ -0.05
SHMT2-213ENST00000554600 FBLN1P23142 703 aa14.74□□□□□ -0.05
SHMT2-213ENST00000554600 LTV1Q96GA3 475 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-213ENST00000554600 ANKRD24Q8TF21 1146 aa14.73□□□□□ -0.05
SHMT2-213ENST00000554600 CARD10Q9BWT7 1032 aa14.73□□□□□ -0.05
SHMT2-213ENST00000554600 ERBB3P21860 1342 aa14.72□□□□□ -0.05
SHMT2-213ENST00000554600 DDB1Q16531 1140 aa14.72□□□□□ -0.05
SHMT2-213ENST00000554600 FAM196AQ6ZSG2 479 aa14.72□□□□□ -0.05
SHMT2-213ENST00000554600 DEFB132Q7Z7B7 95 aa14.72□□□□□ -0.05
SHMT2-213ENST00000554600 CARD14Q9BXL6 1004 aa14.72□□□□□ -0.05
SHMT2-213ENST00000554600 CCDC7Q96M83 1385 aa14.72□□□□□ -0.05
SHMT2-213ENST00000554600 MAP3K19Q56UN5 1328 aa14.71□□□□□ -0.05
SHMT2-213ENST00000554600 BAG6P46379 1132 aa14.71□□□□□ -0.05
SHMT2-213ENST00000554600 RRS1Q15050 365 aaKnown RBP14.71□□□□□ -0.05
SHMT2-213ENST00000554600 IP6K1Q92551 441 aa14.71□□□□□ -0.05
SHMT2-213ENST00000554600 CGNL1Q0VF96 1302 aa14.7□□□□□ -0.06
SHMT2-213ENST00000554600 TRIM37O94972 964 aa14.7□□□□□ -0.06
SHMT2-213ENST00000554600 CDCA7Q9BWT1 371 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-213ENST00000554600 C11orf95C9JLR9 678 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-213ENST00000554600 HOXC9P31274 260 aa14.68□□□□□ -0.06
SHMT2-213ENST00000554600 PANK3Q9H999 370 aa14.68□□□□□ -0.06
SHMT2-213ENST00000554600 PEAK1Q9H792 1746 aa14.68□□□□□ -0.06
SHMT2-213ENST00000554600 OVOS2A0A0G2JMS6 1433 aa14.67□□□□□ -0.06
SHMT2-213ENST00000554600 EXOC5O00471 708 aa14.67□□□□□ -0.06
SHMT2-213ENST00000554600 RTL1A6NKG5 1358 aa14.67□□□□□ -0.06
SHMT2-213ENST00000554600 DISP2A7MBM2 1401 aa14.66□□□□□ -0.06
SHMT2-213ENST00000554600 PPM1GO15355 546 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-213ENST00000554600 IL2RBP14784 551 aa14.66□□□□□ -0.06
SHMT2-213ENST00000554600 EN1Q05925 392 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-213ENST00000554600 SMG6Q86US8 1419 aaKnown RBP14.66□□□□□ -0.06
SHMT2-213ENST00000554600 APBA3O96018 575 aa14.65□□□□□ -0.06
SHMT2-213ENST00000554600 TNNT2P45379 298 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-213ENST00000554600 EMILIN1Q9Y6C2 1016 aa14.64□□□□□ -0.07
SHMT2-213ENST00000554600 TNS2Q63HR2 1409 aa14.64□□□□□ -0.07
SHMT2-213ENST00000554600 KIF7Q2M1P5 1343 aa14.64□□□□□ -0.07
SHMT2-213ENST00000554600 FLT4P35916 1363 aa14.63□□□□□ -0.07
SHMT2-213ENST00000554600 MARCH10Q8NA82 808 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-213ENST00000554600 KNSTRNQ9Y448 316 aa14.63□□□□□ -0.07
SHMT2-213ENST00000554600 HSP90AB2PQ58FF8 381 aa14.62□□□□□ -0.07
SHMT2-213ENST00000554600 EZH2Q15910 746 aaKnown RBP14.61□□□□□ -0.07
SHMT2-213ENST00000554600 USHBP1Q8N6Y0 703 aa14.61□□□□□ -0.07
SHMT2-213ENST00000554600 RREB1Q92766 1687 aa14.61□□□□□ -0.07
SHMT2-213ENST00000554600 INSRP06213 1382 aa14.6□□□□□ -0.07
SHMT2-213ENST00000554600 KIF24Q5T7B8 1368 aa14.6□□□□□ -0.07
SHMT2-213ENST00000554600 SHANK3Q9BYB0 1731 aa14.6□□□□□ -0.07
SHMT2-213ENST00000554600 BTAF1O14981 1849 aa14.59□□□□□ -0.07
SHMT2-213ENST00000554600 NHSQ6T4R5 1651 aa14.59□□□□□ -0.07
SHMT2-213ENST00000554600 NUP188Q5SRE5 1749 aa14.59□□□□□ -0.07
SHMT2-213ENST00000554600 NBPF6Q5VWK0 638 aa14.59□□□□□ -0.07
SHMT2-213ENST00000554600 MORC1Q86VD1 984 aa14.59□□□□□ -0.07
SHMT2-213ENST00000554600 DDX54Q8TDD1 881 aaKnown RBP14.59□□□□□ -0.07
SHMT2-213ENST00000554600 NBPF4Q96M43 638 aa14.59□□□□□ -0.07
SHMT2-213ENST00000554600 RGPD3A6NKT7 1758 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-213ENST00000554600 RGPD4Q7Z3J3 1758 aa14.59□□□□□ -0.07
SHMT2-213ENST00000554600 NSD2O96028 1365 aa14.59□□□□□ -0.07
SHMT2-213ENST00000554600 DOT1LQ8TEK3 1739 aa14.58□□□□□ -0.07
SHMT2-213ENST00000554600 RAPGEF4Q8WZA2 1011 aa14.58□□□□□ -0.08
SHMT2-213ENST00000554600 ACSBG1Q96GR2 724 aa14.58□□□□□ -0.08
SHMT2-213ENST00000554600 MEGF6O75095 1541 aa14.57□□□□□ -0.08
SHMT2-213ENST00000554600 CAMKK2Q96RR4 588 aa14.57□□□□□ -0.08
SHMT2-213ENST00000554600 BCL11BQ9C0K0 894 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-213ENST00000554600 POLKQ9UBT6 870 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms