RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 PARD3Q8TEW0 1356 aa9.1□□□□□ -0.95
FOXN3-205ENST00000553904 COL5A2P05997 1499 aaPredicted RBP9.09□□□□□ -0.95
FOXN3-205ENST00000553904 NRAPQ86VF7 1730 aa9.09□□□□□ -0.95
FOXN3-205ENST00000553904 EDC4Q6P2E9 1401 aaKnown RBP9.09□□□□□ -0.95
FOXN3-205ENST00000553904 EZH2Q15910 746 aaKnown RBP9.09□□□□□ -0.95
FOXN3-205ENST00000553904 NME9Q86XW9 330 aa9.09□□□□□ -0.95
FOXN3-205ENST00000553904 CAMKK2Q96RR4 588 aa9.09□□□□□ -0.95
FOXN3-205ENST00000553904 TESK2Q96S53 571 aa9.09□□□□□ -0.95
FOXN3-205ENST00000553904 NLRP2Q9NX02 1062 aa9.09□□□□□ -0.95
FOXN3-205ENST00000553904 CCDC7Q96M83 1385 aa9.09□□□□□ -0.95
FOXN3-205ENST00000553904 PLSCR1O15162 318 aa9.08□□□□□ -0.96
FOXN3-205ENST00000553904 BCL11BQ9C0K0 894 aaPredicted RBP9.08□□□□□ -0.96
FOXN3-205ENST00000553904 PHRF1Q9P1Y6 1649 aaKnown RBP9.08□□□□□ -0.96
FOXN3-205ENST00000553904 CRYBG1Q9Y4K1 1723 aa9.08□□□□□ -0.96
FOXN3-205ENST00000553904 NRKQ7Z2Y5 1582 aa9.07□□□□□ -0.96
FOXN3-205ENST00000553904 DISP2A7MBM2 1401 aa9.07□□□□□ -0.96
FOXN3-205ENST00000553904 SLIT3O75094 1523 aa9.07□□□□□ -0.96
FOXN3-205ENST00000553904 AMPHP49418 695 aa9.07□□□□□ -0.96
FOXN3-205ENST00000553904 IP6K1Q92551 441 aa9.07□□□□□ -0.96
FOXN3-205ENST00000553904 BRWD3Q6RI45 1802 aa9.06□□□□□ -0.96
FOXN3-205ENST00000553904 PSDA5PKW4 1024 aaPredicted RBP9.06□□□□□ -0.96
FOXN3-205ENST00000553904 IL2RBP14784 551 aa9.06□□□□□ -0.96
FOXN3-205ENST00000553904 R3HDM1Q15032 1099 aaKnown RBP9.06□□□□□ -0.96
FOXN3-205ENST00000553904 ANKRD24Q8TF21 1146 aa9.06□□□□□ -0.96
FOXN3-205ENST00000553904 OVOS2A0A0G2JMS6 1433 aa9.05□□□□□ -0.96
FOXN3-205ENST00000553904 OVOS2A0A0J9YW53 1432 aa9.05□□□□□ -0.96
FOXN3-205ENST00000553904 OVOS2Q6IE36 1432 aa9.05□□□□□ -0.96
FOXN3-205ENST00000553904 THSD7AQ9UPZ6 1657 aa9.05□□□□□ -0.96
FOXN3-205ENST00000553904 A0A1W2PP64 1363 aa9.05□□□□□ -0.96
FOXN3-205ENST00000553904 USP47Q96K76 1375 aa9.05□□□□□ -0.96
FOXN3-205ENST00000553904 CCER1Q8TC90 406 aaPredicted RBP9.05□□□□□ -0.96
FOXN3-205ENST00000553904 ERBB3P21860 1342 aa9.05□□□□□ -0.96
FOXN3-205ENST00000553904 LMO7Q8WWI1 1683 aa9.04□□□□□ -0.96
FOXN3-205ENST00000553904 ANKRD36BQ8N2N9 1353 aa9.04□□□□□ -0.96
FOXN3-205ENST00000553904 HMGB2P26583 209 aaKnown RBP9.04□□□□□ -0.96
FOXN3-205ENST00000553904 MARCH10Q8NA82 808 aaPredicted RBP9.04□□□□□ -0.96
FOXN3-205ENST00000553904 FYB1O15117 783 aa9.03□□□□□ -0.96
FOXN3-205ENST00000553904 BCL9O00512 1426 aa9.03□□□□□ -0.96
FOXN3-205ENST00000553904 CD163L1Q9NR16 1453 aa9.02□□□□□ -0.96
FOXN3-205ENST00000553904 ABCC6O95255 1503 aa9.02□□□□□ -0.97
FOXN3-205ENST00000553904 PIK3C2AO00443 1686 aa9.02□□□□□ -0.97
FOXN3-205ENST00000553904 DCAF8L1A6NGE4 600 aa9.02□□□□□ -0.97
FOXN3-205ENST00000553904 EIF4G2P78344 907 aaKnown RBP eCLIP9.02□□□□□ -0.97
FOXN3-205ENST00000553904 LTV1Q96GA3 475 aaPredicted RBP9.02□□□□□ -0.97
FOXN3-205ENST00000553904 RGPD1P0DJD0 1748 aa9.02□□□□□ -0.97
FOXN3-205ENST00000553904 HOXC9P31274 260 aa9.01□□□□□ -0.97
FOXN3-205ENST00000553904 DDX54Q8TDD1 881 aaKnown RBP9.01□□□□□ -0.97
FOXN3-205ENST00000553904 GGNBP2Q9H3C7 697 aa9.01□□□□□ -0.97
FOXN3-205ENST00000553904 SPON1Q9HCB6 807 aa9.01□□□□□ -0.97
FOXN3-205ENST00000553904 AKAP12Q02952 1782 aa9.01□□□□□ -0.97
FOXN3-205ENST00000553904 CGNL1Q0VF96 1302 aa9.01□□□□□ -0.97
FOXN3-205ENST00000553904 MAP3K19Q56UN5 1328 aa9.01□□□□□ -0.97
FOXN3-205ENST00000553904 TXNRD1Q16881 649 aa9□□□□□ -0.97
FOXN3-205ENST00000553904 ZCRB1Q8TBF4 217 aaKnown RBP9□□□□□ -0.97
FOXN3-205ENST00000553904 RAPGEF4Q8WZA2 1011 aa9□□□□□ -0.97
FOXN3-205ENST00000553904 STK32BQ9NY57 414 aa9□□□□□ -0.97
FOXN3-205ENST00000553904 PPP1R1BQ9UD71 204 aaPredicted RBP9□□□□□ -0.97
FOXN3-205ENST00000553904 NFAT5O94916 1531 aa9□□□□□ -0.97
FOXN3-205ENST00000553904 KCNQ2O43526 872 aa8.99□□□□□ -0.97
FOXN3-205ENST00000553904 POLR3GLQ9BT43 218 aa8.99□□□□□ -0.97
FOXN3-205ENST00000553904 PARP4Q9UKK3 1724 aaKnown RBP8.99□□□□□ -0.97
FOXN3-205ENST00000553904 KIF24Q5T7B8 1368 aa8.99□□□□□ -0.97
FOXN3-205ENST00000553904 SMG6Q86US8 1419 aaKnown RBP8.98□□□□□ -0.97
FOXN3-205ENST00000553904 TATP17735 454 aaPredicted RBP8.98□□□□□ -0.97
FOXN3-205ENST00000553904 RRS1Q15050 365 aaKnown RBP8.98□□□□□ -0.97
FOXN3-205ENST00000553904 ACSBG1Q96GR2 724 aa8.98□□□□□ -0.97
FOXN3-205ENST00000553904 COL18A1P39060 1754 aa8.98□□□□□ -0.97
FOXN3-205ENST00000553904 RTL1A6NKG5 1358 aa8.98□□□□□ -0.97
FOXN3-205ENST00000553904 MON2Q7Z3U7 1717 aa8.97□□□□□ -0.97
FOXN3-205ENST00000553904 PPM1GO15355 546 aaPredicted RBP8.97□□□□□ -0.97
FOXN3-205ENST00000553904 FBLN1P23142 703 aa8.97□□□□□ -0.97
FOXN3-205ENST00000553904 SLC15A2Q16348 729 aa8.97□□□□□ -0.97
FOXN3-205ENST00000553904 SLC27A3Q5K4L6 730 aa8.97□□□□□ -0.97
FOXN3-205ENST00000553904 PROM2Q8N271 834 aa8.97□□□□□ -0.97
FOXN3-205ENST00000553904 SYTL4Q96C24 671 aaPredicted RBP8.97□□□□□ -0.97
FOXN3-205ENST00000553904 CARD14Q9BXL6 1004 aa8.97□□□□□ -0.97
FOXN3-205ENST00000553904 TNS2Q63HR2 1409 aa8.97□□□□□ -0.97
FOXN3-205ENST00000553904 NBPF6Q5VWK0 638 aa8.96□□□□□ -0.98
FOXN3-205ENST00000553904 NBPF4Q96M43 638 aa8.96□□□□□ -0.98
FOXN3-205ENST00000553904 INSRP06213 1382 aa8.96□□□□□ -0.98
FOXN3-205ENST00000553904 EP400Q96L91 3159 aa8.96□□□□□ -0.98
FOXN3-205ENST00000553904 PRIM1P49642 420 aaKnown RBP8.95□□□□□ -0.98
FOXN3-205ENST00000553904 HSP90AB2PQ58FF8 381 aa8.95□□□□□ -0.98
FOXN3-205ENST00000553904 PTF1AQ7RTS3 328 aa8.95□□□□□ -0.98
FOXN3-205ENST00000553904 FLT4P35916 1363 aa8.95□□□□□ -0.98
FOXN3-205ENST00000553904 HSPA5P11021 654 aaKnown RBP8.94□□□□□ -0.98
FOXN3-205ENST00000553904 SLC16A10Q8TF71 515 aa8.94□□□□□ -0.98
FOXN3-205ENST00000553904 SPG7Q9UQ90 795 aa8.94□□□□□ -0.98
FOXN3-205ENST00000553904 WASHC2AQ641Q2 1341 aa8.94□□□□□ -0.98
FOXN3-205ENST00000553904 USP54Q70EL1 1684 aa8.94□□□□□ -0.98
FOXN3-205ENST00000553904 MTFR1LQ9H019 292 aa8.93□□□□□ -0.98
FOXN3-205ENST00000553904 PANK3Q9H999 370 aa8.93□□□□□ -0.98
FOXN3-205ENST00000553904 KNSTRNQ9Y448 316 aa8.93□□□□□ -0.98
FOXN3-205ENST00000553904 PCDH11XQ9BZA7 1347 aa8.93□□□□□ -0.98
FOXN3-205ENST00000553904 PCDH11YQ9BZA8 1340 aa8.93□□□□□ -0.98
FOXN3-205ENST00000553904 NSD3Q9BZ95 1437 aa8.93□□□□□ -0.98
FOXN3-205ENST00000553904 LRRC37A3O60309 1634 aa8.93□□□□□ -0.98
FOXN3-205ENST00000553904 TNS1Q9HBL0 1735 aaKnown RBP8.93□□□□□ -0.98
FOXN3-205ENST00000553904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.92□□□□□ -0.98
FOXN3-205ENST00000553904 POLKQ9UBT6 870 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms