RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 COL18A1P39060 1754 aa14.19□□□□□ -0.14
HNRNPC-208ENST00000553753 USP54Q70EL1 1684 aa14.19□□□□□ -0.14
HNRNPC-208ENST00000553753 CCDC125Q86Z20 511 aa14.19□□□□□ -0.14
HNRNPC-208ENST00000553753 TCP11L2Q8N4U5 519 aa14.19□□□□□ -0.14
HNRNPC-208ENST00000553753 THRAP3Q9Y2W1 955 aaKnown RBP14.19□□□□□ -0.14
HNRNPC-208ENST00000553753 OVOS2A0A0J9YW53 1432 aa14.19□□□□□ -0.14
HNRNPC-208ENST00000553753 OVOS2Q6IE36 1432 aa14.19□□□□□ -0.14
HNRNPC-208ENST00000553753 COG3Q96JB2 828 aa14.19□□□□□ -0.14
HNRNPC-208ENST00000553753 CRB1P82279 1406 aa14.18□□□□□ -0.14
HNRNPC-208ENST00000553753 TOM1L2Q6ZVM7 507 aa14.18□□□□□ -0.14
HNRNPC-208ENST00000553753 WDR17Q8IZU2 1322 aa14.18□□□□□ -0.14
HNRNPC-208ENST00000553753 FYB1O15117 783 aa14.17□□□□□ -0.14
HNRNPC-208ENST00000553753 THSD7AQ9UPZ6 1657 aa14.17□□□□□ -0.14
HNRNPC-208ENST00000553753 POLR3GLQ9BT43 218 aa14.17□□□□□ -0.14
HNRNPC-208ENST00000553753 CARD14Q9BXL6 1004 aa14.16□□□□□ -0.14
HNRNPC-208ENST00000553753 CSB-PGBD3P0DP91 1061 aa14.15□□□□□ -0.14
HNRNPC-208ENST00000553753 GGNBP2Q9H3C7 697 aa14.15□□□□□ -0.14
HNRNPC-208ENST00000553753 MYOM1P52179 1685 aa14.15□□□□□ -0.14
HNRNPC-208ENST00000553753 ABCC6O95255 1503 aa14.15□□□□□ -0.14
HNRNPC-208ENST00000553753 RGPD5Q99666 1765 aa14.15□□□□□ -0.14
HNRNPC-208ENST00000553753 BLMP54132 1417 aaPredicted RBP14.15□□□□□ -0.14
HNRNPC-208ENST00000553753 FAM182BQ5T319 152 aa14.14□□□□□ -0.15
HNRNPC-208ENST00000553753 PDE3BQ13370 1112 aa14.14□□□□□ -0.15
HNRNPC-208ENST00000553753 CARD10Q9BWT7 1032 aa14.14□□□□□ -0.15
HNRNPC-208ENST00000553753 LTN1O94822 1766 aa14.13□□□□□ -0.15
HNRNPC-208ENST00000553753 FBLN1P23142 703 aa14.13□□□□□ -0.15
HNRNPC-208ENST00000553753 ERBB3P21860 1342 aa14.13□□□□□ -0.15
HNRNPC-208ENST00000553753 SF3B2Q13435 895 aaKnown RBP14.12□□□□□ -0.15
HNRNPC-208ENST00000553753 IP6K1Q92551 441 aa14.12□□□□□ -0.15
HNRNPC-208ENST00000553753 NSD3Q9BZ95 1437 aa14.12□□□□□ -0.15
HNRNPC-208ENST00000553753 C11orf95C9JLR9 678 aaPredicted RBP14.11□□□□□ -0.15
HNRNPC-208ENST00000553753 MAP3K19Q56UN5 1328 aa14.11□□□□□ -0.15
HNRNPC-208ENST00000553753 FAM196AQ6ZSG2 479 aa14.11□□□□□ -0.15
HNRNPC-208ENST00000553753 ANKRD24Q8TF21 1146 aa14.11□□□□□ -0.15
HNRNPC-208ENST00000553753 CDCA7Q9BWT1 371 aaPredicted RBP14.11□□□□□ -0.15
HNRNPC-208ENST00000553753 SRCAPQ6ZRS2 3230 aa14.1□□□□□ -0.15
HNRNPC-208ENST00000553753 AMPHP49418 695 aa14.1□□□□□ -0.15
HNRNPC-208ENST00000553753 CCDC7Q96M83 1385 aa14.09□□□□□ -0.15
HNRNPC-208ENST00000553753 CGNL1Q0VF96 1302 aa14.09□□□□□ -0.15
HNRNPC-208ENST00000553753 RRS1Q15050 365 aaKnown RBP14.09□□□□□ -0.15
HNRNPC-208ENST00000553753 DDB1Q16531 1140 aa14.09□□□□□ -0.15
HNRNPC-208ENST00000553753 NLRP2Q9NX02 1062 aa14.09□□□□□ -0.15
HNRNPC-208ENST00000553753 KIF20BQ96Q89 1820 aa14.09□□□□□ -0.15
HNRNPC-208ENST00000553753 HOXC9P31274 260 aa14.09□□□□□ -0.15
HNRNPC-208ENST00000553753 DEFB132Q7Z7B7 95 aa14.09□□□□□ -0.15
HNRNPC-208ENST00000553753 PANK3Q9H999 370 aa14.09□□□□□ -0.15
HNRNPC-208ENST00000553753 PARP4Q9UKK3 1724 aaKnown RBP14.09□□□□□ -0.15
HNRNPC-208ENST00000553753 LTV1Q96GA3 475 aaPredicted RBP14.07□□□□□ -0.16
HNRNPC-208ENST00000553753 EXOC5O00471 708 aa14.06□□□□□ -0.16
HNRNPC-208ENST00000553753 TRIM37O94972 964 aa14.06□□□□□ -0.16
HNRNPC-208ENST00000553753 BAG6P46379 1132 aa14.06□□□□□ -0.16
HNRNPC-208ENST00000553753 DISP2A7MBM2 1401 aa14.06□□□□□ -0.16
HNRNPC-208ENST00000553753 RTL1A6NKG5 1358 aa14.05□□□□□ -0.16
HNRNPC-208ENST00000553753 KIF7Q2M1P5 1343 aa14.05□□□□□ -0.16
HNRNPC-208ENST00000553753 LRRC37A3O60309 1634 aa14.04□□□□□ -0.16
HNRNPC-208ENST00000553753 IL2RBP14784 551 aa14.04□□□□□ -0.16
HNRNPC-208ENST00000553753 WNK3Q9BYP7 1800 aa14.04□□□□□ -0.16
HNRNPC-208ENST00000553753 OVOS2A0A0G2JMS6 1433 aa14.04□□□□□ -0.16
HNRNPC-208ENST00000553753 KIF24Q5T7B8 1368 aa14.03□□□□□ -0.16
HNRNPC-208ENST00000553753 RGPD1P0DJD0 1748 aa14.03□□□□□ -0.16
HNRNPC-208ENST00000553753 HSP90AB2PQ58FF8 381 aa14.03□□□□□ -0.16
HNRNPC-208ENST00000553753 MARCH10Q8NA82 808 aaPredicted RBP14.03□□□□□ -0.16
HNRNPC-208ENST00000553753 FLT4P35916 1363 aa14.03□□□□□ -0.16
HNRNPC-208ENST00000553753 EN1Q05925 392 aaPredicted RBP14.02□□□□□ -0.16
HNRNPC-208ENST00000553753 EMILIN1Q9Y6C2 1016 aa14.02□□□□□ -0.16
HNRNPC-208ENST00000553753 INSRP06213 1382 aa14.02□□□□□ -0.16
HNRNPC-208ENST00000553753 PPM1GO15355 546 aaPredicted RBP14.01□□□□□ -0.17
HNRNPC-208ENST00000553753 APBA3O96018 575 aa14.01□□□□□ -0.17
HNRNPC-208ENST00000553753 KNSTRNQ9Y448 316 aa14.01□□□□□ -0.17
HNRNPC-208ENST00000553753 FAM208AQ9UK61 1670 aaKnown RBP14.01□□□□□ -0.17
HNRNPC-208ENST00000553753 TNS2Q63HR2 1409 aa14□□□□□ -0.17
HNRNPC-208ENST00000553753 SMG6Q86US8 1419 aaKnown RBP14□□□□□ -0.17
HNRNPC-208ENST00000553753 PEAK1Q9H792 1746 aa14□□□□□ -0.17
HNRNPC-208ENST00000553753 TNS1Q9HBL0 1735 aaKnown RBP14□□□□□ -0.17
HNRNPC-208ENST00000553753 TNNT2P45379 298 aaPredicted RBP14□□□□□ -0.17
HNRNPC-208ENST00000553753 NBPF6Q5VWK0 638 aa14□□□□□ -0.17
HNRNPC-208ENST00000553753 NBPF4Q96M43 638 aa14□□□□□ -0.17
HNRNPC-208ENST00000553753 NSD2O96028 1365 aa13.99□□□□□ -0.17
HNRNPC-208ENST00000553753 POLKQ9UBT6 870 aa13.99□□□□□ -0.17
HNRNPC-208ENST00000553753 BCL9O00512 1426 aa13.99□□□□□ -0.17
HNRNPC-208ENST00000553753 MAP2P11137 1827 aaKnown RBP13.99□□□□□ -0.17
HNRNPC-208ENST00000553753 EZH2Q15910 746 aaKnown RBP13.99□□□□□ -0.17
HNRNPC-208ENST00000553753 CAMKK2Q96RR4 588 aa13.99□□□□□ -0.17
HNRNPC-208ENST00000553753 WASHC2AQ641Q2 1341 aa13.98□□□□□ -0.17
HNRNPC-208ENST00000553753 BCL11BQ9C0K0 894 aaPredicted RBP13.98□□□□□ -0.17
HNRNPC-208ENST00000553753 ANKRD26Q9UPS8 1709 aa13.97□□□□□ -0.17
HNRNPC-208ENST00000553753 RGPD2P0DJD1 1756 aa13.97□□□□□ -0.17
HNRNPC-208ENST00000553753 MORC1Q86VD1 984 aa13.97□□□□□ -0.17
HNRNPC-208ENST00000553753 SBF2Q86WG5 1849 aa13.97□□□□□ -0.17
HNRNPC-208ENST00000553753 PER1O15534 1290 aaPredicted RBP13.96□□□□□ -0.17
HNRNPC-208ENST00000553753 AMER1Q5JTC6 1135 aaPredicted RBP13.96□□□□□ -0.17
HNRNPC-208ENST00000553753 USHBP1Q8N6Y0 703 aa13.96□□□□□ -0.17
HNRNPC-208ENST00000553753 PARD3Q8TEW0 1356 aa13.96□□□□□ -0.17
HNRNPC-208ENST00000553753 PTF1AQ7RTS3 328 aa13.96□□□□□ -0.18
HNRNPC-208ENST00000553753 DDX54Q8TDD1 881 aaKnown RBP13.96□□□□□ -0.18
HNRNPC-208ENST00000553753 RAPGEF4Q8WZA2 1011 aa13.95□□□□□ -0.18
HNRNPC-208ENST00000553753 PLSCR1O15162 318 aa13.94□□□□□ -0.18
HNRNPC-208ENST00000553753 ZCRB1Q8TBF4 217 aaKnown RBP13.94□□□□□ -0.18
HNRNPC-208ENST00000553753 MEGF6O75095 1541 aa13.94□□□□□ -0.18
HNRNPC-208ENST00000553753 KCNQ2O43526 872 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms