RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 TRMT44Q8IYL2 757 aaKnown RBP8.15□□□□□ -1.1
ATXN3-220ENST00000553491 AXIN1O15169 862 aa8.14□□□□□ -1.11
ATXN3-220ENST00000553491 BANK1Q8NDB2 785 aa8.14□□□□□ -1.11
ATXN3-220ENST00000553491 KLF16Q9BXK1 252 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-220ENST00000553491 ADH1CP00326 375 aa8.13□□□□□ -1.11
ATXN3-220ENST00000553491 AGERQ15109 404 aa8.13□□□□□ -1.11
ATXN3-220ENST00000553491 ERFEQ4G0M1 354 aa8.13□□□□□ -1.11
ATXN3-220ENST00000553491 WASF2Q9Y6W5 498 aa8.13□□□□□ -1.11
ATXN3-220ENST00000553491 SOCS7O14512 581 aa8.12□□□□□ -1.11
ATXN3-220ENST00000553491 GPR37L1O60883 481 aa8.12□□□□□ -1.11
ATXN3-220ENST00000553491 GPSM3Q9Y4H4 160 aa8.12□□□□□ -1.11
ATXN3-220ENST00000553491 MAGEB6P1A0A0J9YX57 407 aa8.11□□□□□ -1.11
ATXN3-220ENST00000553491 NR3C2P08235 984 aa8.11□□□□□ -1.11
ATXN3-220ENST00000553491 NNTQ13423 1086 aa8.11□□□□□ -1.11
ATXN3-220ENST00000553491 ZNF787Q6DD87 383 aa8.11□□□□□ -1.11
ATXN3-220ENST00000553491 MTMR14Q8NCE2 650 aa8.11□□□□□ -1.11
ATXN3-220ENST00000553491 ARHGAP9Q9BRR9 750 aa8.11□□□□□ -1.11
ATXN3-220ENST00000553491 SNRKQ9NRH2 765 aa8.11□□□□□ -1.11
ATXN3-220ENST00000553491 MAP4K5Q9Y4K4 846 aa8.11□□□□□ -1.11
ATXN3-220ENST00000553491 CARD14Q9BXL6 1004 aa8.1□□□□□ -1.11
ATXN3-220ENST00000553491 FANCD2Q9BXW9 1451 aa8.1□□□□□ -1.11
ATXN3-220ENST00000553491 CEP164Q9UPV0 1460 aa8.1□□□□□ -1.11
ATXN3-220ENST00000553491 CFTRP13569 1480 aa8.09□□□□□ -1.11
ATXN3-220ENST00000553491 NR5A1Q13285 461 aa8.09□□□□□ -1.11
ATXN3-220ENST00000553491 ARID5BQ14865 1188 aa8.09□□□□□ -1.11
ATXN3-220ENST00000553491 ATP13A2Q9NQ11 1180 aa8.09□□□□□ -1.11
ATXN3-220ENST00000553491 TIMP2P16035 220 aa8.08□□□□□ -1.12
ATXN3-220ENST00000553491 PTK2Q05397 1052 aa8.08□□□□□ -1.12
ATXN3-220ENST00000553491 GMPR2Q9P2T1 348 aaKnown RBP8.08□□□□□ -1.12
ATXN3-220ENST00000553491 THOC2Q8NI27 1593 aaKnown RBP8.08□□□□□ -1.12
ATXN3-220ENST00000553491 CAPN5O15484 640 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-220ENST00000553491 ADAM32Q8TC27 787 aa8.07□□□□□ -1.12
ATXN3-220ENST00000553491 CUX2O14529 1486 aa8.06□□□□□ -1.12
ATXN3-220ENST00000553491 MRC2Q9UBG0 1479 aa8.06□□□□□ -1.12
ATXN3-220ENST00000553491 VASH1Q7L8A9 365 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-220ENST00000553491 TRIM46Q7Z4K8 759 aa8.06□□□□□ -1.12
ATXN3-220ENST00000553491 ZBTB33Q86T24 672 aa8.06□□□□□ -1.12
ATXN3-220ENST00000553491 FSHRP23945 695 aa8.05□□□□□ -1.12
ATXN3-220ENST00000553491 PNMA1Q8ND90 353 aa8.05□□□□□ -1.12
ATXN3-220ENST00000553491 ITPKCQ96DU7 683 aa8.05□□□□□ -1.12
ATXN3-220ENST00000553491 WDR4P57081 412 aaKnown RBP8.04□□□□□ -1.12
ATXN3-220ENST00000553491 ZFAND3Q9H8U3 227 aa8.04□□□□□ -1.12
ATXN3-220ENST00000553491 ZBBXA8MT70 800 aa8.03□□□□□ -1.12
ATXN3-220ENST00000553491 FBXO45P0C2W1 286 aa8.03□□□□□ -1.12
ATXN3-220ENST00000553491 BMP1P13497 986 aa8.03□□□□□ -1.12
ATXN3-220ENST00000553491 KCTD15Q96SI1 283 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-220ENST00000553491 ZIC2O95409 532 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-220ENST00000553491 SLC10A4Q96EP9 437 aa8.02□□□□□ -1.13
ATXN3-220ENST00000553491 TRIM47Q96LD4 638 aa8.02□□□□□ -1.13
ATXN3-220ENST00000553491 CDV3Q9UKY7 258 aaKnown RBP8.02□□□□□ -1.13
ATXN3-220ENST00000553491 NDUFB9Q9Y6M9 179 aa8.02□□□□□ -1.13
ATXN3-220ENST00000553491 ESPNB1AK53 854 aa8.01□□□□□ -1.13
ATXN3-220ENST00000553491 SNRPBP14678 240 aaKnown RBP8.01□□□□□ -1.13
ATXN3-220ENST00000553491 CCDC116Q8IYX3 515 aa8.01□□□□□ -1.13
ATXN3-220ENST00000553491 ZNF775Q96BV0 537 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-220ENST00000553491 ZMYND15Q9H091 742 aa8.01□□□□□ -1.13
ATXN3-220ENST00000553491 URB2Q14146 1524 aaKnown RBP8.01□□□□□ -1.13
ATXN3-220ENST00000553491 WDR62O43379 1518 aa8□□□□□ -1.13
ATXN3-220ENST00000553491 C11orf95C9JLR9 678 aaPredicted RBP8□□□□□ -1.13
ATXN3-220ENST00000553491 FLIIQ13045 1269 aa8□□□□□ -1.13
ATXN3-220ENST00000553491 INTS6LQ5JSJ4 861 aaKnown RBP8□□□□□ -1.13
ATXN3-220ENST00000553491 TBC1D2BQ9UPU7 963 aa8□□□□□ -1.13
ATXN3-220ENST00000553491 NR1H3Q13133 447 aa7.99□□□□□ -1.13
ATXN3-220ENST00000553491 PPP1R26Q5T8A7 1209 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-220ENST00000553491 MRPL14Q6P1L8 145 aaKnown RBP7.99□□□□□ -1.13
ATXN3-220ENST00000553491 SENP2Q9HC62 589 aa7.99□□□□□ -1.13
ATXN3-220ENST00000553491 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
ATXN3-220ENST00000553491 IRF5Q13568 498 aa7.98□□□□□ -1.13
ATXN3-220ENST00000553491 MCM6Q14566 821 aa7.98□□□□□ -1.13
ATXN3-220ENST00000553491 DZIP3Q86Y13 1208 aaKnown RBP7.98□□□□□ -1.13
ATXN3-220ENST00000553491 ZFP42Q96MM3 310 aa7.98□□□□□ -1.13
ATXN3-220ENST00000553491 NBPF20Q3BBV1 942 aa7.97□□□□□ -1.13
ATXN3-220ENST00000553491 Q6ZVU0 165 aa7.97□□□□□ -1.13
ATXN3-220ENST00000553491 MEIOBQ8N635 442 aa7.97□□□□□ -1.13
ATXN3-220ENST00000553491 KIFC2Q96AC6 838 aa7.97□□□□□ -1.13
ATXN3-220ENST00000553491 TOPBP1Q92547 1522 aa7.97□□□□□ -1.13
ATXN3-220ENST00000553491 ABCC8Q09428 1581 aa7.97□□□□□ -1.13
ATXN3-220ENST00000553491 APBB1O00213 710 aa7.96□□□□□ -1.14
ATXN3-220ENST00000553491 DNMBPQ6XZF7 1577 aa7.96□□□□□ -1.14
ATXN3-220ENST00000553491 ERVH48-1M5A8F1 160 aa7.95□□□□□ -1.14
ATXN3-220ENST00000553491 DHX9Q08211 1270 aaKnown RBP7.95□□□□□ -1.14
ATXN3-220ENST00000553491 CBLBQ13191 982 aa7.95□□□□□ -1.14
ATXN3-220ENST00000553491 LCE2AQ5TA79 106 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-220ENST00000553491 PURBQ96QR8 312 aaKnown RBP7.95□□□□□ -1.14
ATXN3-220ENST00000553491 TMPRSS4Q9NRS4 437 aa7.95□□□□□ -1.14
ATXN3-220ENST00000553491 LILRA1O75019 489 aa7.94□□□□□ -1.14
ATXN3-220ENST00000553491 GIGYF1O75420 1035 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-220ENST00000553491 PCDHB9Q9Y5E1 797 aa7.94□□□□□ -1.14
ATXN3-220ENST00000553491 SEPT12Q8IYM1 358 aa7.93□□□□□ -1.14
ATXN3-220ENST00000553491 LINC00528Q8N1L1 170 aa7.93□□□□□ -1.14
ATXN3-220ENST00000553491 GDPD2Q9HCC8 539 aa7.93□□□□□ -1.14
ATXN3-220ENST00000553491 PGPEP1Q9NXJ5 209 aa7.93□□□□□ -1.14
ATXN3-220ENST00000553491 ADD1P35611 737 aaKnown RBP7.92□□□□□ -1.14
ATXN3-220ENST00000553491 MCCD1P59942 119 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-220ENST00000553491 KDF1Q8NAX2 398 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-220ENST00000553491 ZNF784Q8NCA9 323 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-220ENST00000553491 CLUAP1Q96AJ1 413 aa7.92□□□□□ -1.14
ATXN3-220ENST00000553491 SOGA1O94964 1423 aa7.92□□□□□ -1.14
ATXN3-220ENST00000553491 SCARF1Q14162 830 aa7.91□□□□□ -1.14
ATXN3-220ENST00000553491 COG6Q9Y2V7 657 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms