RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 WDR17Q8IZU2 1322 aa19.5■□□□□ 0.71
SMARCC2-212ENST00000552566 HDGFL2Q7Z4V5 671 aaPredicted RBP19.49■□□□□ 0.71
SMARCC2-212ENST00000552566 NME9Q86XW9 330 aa19.48■□□□□ 0.71
SMARCC2-212ENST00000552566 SLC12A5Q9H2X9 1139 aa19.48■□□□□ 0.71
SMARCC2-212ENST00000552566 RGPD1P0DJD0 1748 aa19.48■□□□□ 0.71
SMARCC2-212ENST00000552566 SBNO2Q9Y2G9 1366 aa19.47■□□□□ 0.71
SMARCC2-212ENST00000552566 PIK3C2AO00443 1686 aa19.46■□□□□ 0.71
SMARCC2-212ENST00000552566 PARD3Q8TEW0 1356 aa19.46■□□□□ 0.71
SMARCC2-212ENST00000552566 C11orf95C9JLR9 678 aaPredicted RBP19.46■□□□□ 0.71
SMARCC2-212ENST00000552566 NBPF14Q5TI25 921 aa19.46■□□□□ 0.71
SMARCC2-212ENST00000552566 CDCA7Q9BWT1 371 aaPredicted RBP19.45■□□□□ 0.7
SMARCC2-212ENST00000552566 CARD10Q9BWT7 1032 aa19.45■□□□□ 0.7
SMARCC2-212ENST00000552566 TERF2IPQ9NYB0 399 aa19.45■□□□□ 0.7
SMARCC2-212ENST00000552566 OVOS2A0A0G2JMS6 1433 aa19.44■□□□□ 0.7
SMARCC2-212ENST00000552566 OVOS2A0A0J9YW53 1432 aa19.44■□□□□ 0.7
SMARCC2-212ENST00000552566 OVOS2Q6IE36 1432 aa19.44■□□□□ 0.7
SMARCC2-212ENST00000552566 ST20-MTHFSA0A0A6YYL1 179 aa19.42■□□□□ 0.7
SMARCC2-212ENST00000552566 MARCH10Q8NA82 808 aaPredicted RBP19.42■□□□□ 0.7
SMARCC2-212ENST00000552566 NLRP2Q9NX02 1062 aa19.42■□□□□ 0.7
SMARCC2-212ENST00000552566 TNS1Q9HBL0 1735 aaKnown RBP19.42■□□□□ 0.7
SMARCC2-212ENST00000552566 EXOC5O00471 708 aa19.41■□□□□ 0.7
SMARCC2-212ENST00000552566 USP31Q70CQ4 1352 aa19.41■□□□□ 0.7
SMARCC2-212ENST00000552566 PTF1AQ7RTS3 328 aa19.4■□□□□ 0.7
SMARCC2-212ENST00000552566 BCL11BQ9C0K0 894 aaPredicted RBP19.4■□□□□ 0.7
SMARCC2-212ENST00000552566 CD163L1Q9NR16 1453 aa19.4■□□□□ 0.7
SMARCC2-212ENST00000552566 A0A1W2PP64 1363 aa19.39■□□□□ 0.69
SMARCC2-212ENST00000552566 NFAT5O94916 1531 aa19.38■□□□□ 0.69
SMARCC2-212ENST00000552566 EDC4Q6P2E9 1401 aaKnown RBP19.38■□□□□ 0.69
SMARCC2-212ENST00000552566 CCDC7Q96M83 1385 aa19.38■□□□□ 0.69
SMARCC2-212ENST00000552566 PUS7Q96PZ0 661 aaKnown RBP19.38■□□□□ 0.69
SMARCC2-212ENST00000552566 TESK2Q96S53 571 aa19.38■□□□□ 0.69
SMARCC2-212ENST00000552566 ANKRD24Q8TF21 1146 aa19.37■□□□□ 0.69
SMARCC2-212ENST00000552566 LRP5O75197 1615 aa19.36■□□□□ 0.69
SMARCC2-212ENST00000552566 ERBB3P21860 1342 aa19.36■□□□□ 0.69
SMARCC2-212ENST00000552566 PLSCR1O15162 318 aa19.36■□□□□ 0.69
SMARCC2-212ENST00000552566 PARP4Q9UKK3 1724 aaKnown RBP19.36■□□□□ 0.69
SMARCC2-212ENST00000552566 COL18A1P39060 1754 aa19.35■□□□□ 0.69
SMARCC2-212ENST00000552566 LRRC37A3O60309 1634 aa19.34■□□□□ 0.69
SMARCC2-212ENST00000552566 EIF4G2P78344 907 aaKnown RBP eCLIP19.34■□□□□ 0.69
SMARCC2-212ENST00000552566 LTV1Q96GA3 475 aaPredicted RBP19.34■□□□□ 0.69
SMARCC2-212ENST00000552566 AKAP12Q02952 1782 aa19.34■□□□□ 0.69
SMARCC2-212ENST00000552566 SLC24A1O60721 1099 aa19.33■□□□□ 0.68
SMARCC2-212ENST00000552566 IL2RBP14784 551 aa19.33■□□□□ 0.68
SMARCC2-212ENST00000552566 COG3Q96JB2 828 aa19.33■□□□□ 0.68
SMARCC2-212ENST00000552566 ACSBG1Q96GR2 724 aa19.32■□□□□ 0.68
SMARCC2-212ENST00000552566 KCNQ2O43526 872 aa19.31■□□□□ 0.68
SMARCC2-212ENST00000552566 ANO8Q9HCE9 1232 aaPredicted RBP19.31■□□□□ 0.68
SMARCC2-212ENST00000552566 PPP1R1BQ9UD71 204 aaPredicted RBP19.31■□□□□ 0.68
SMARCC2-212ENST00000552566 NINLQ9Y2I6 1382 aa19.31■□□□□ 0.68
SMARCC2-212ENST00000552566 TMF1P82094 1093 aa19.3■□□□□ 0.68
SMARCC2-212ENST00000552566 PROM2Q8N271 834 aa19.3■□□□□ 0.68
SMARCC2-212ENST00000552566 IP6K1Q92551 441 aa19.3■□□□□ 0.68
SMARCC2-212ENST00000552566 SPON1Q9HCB6 807 aa19.3■□□□□ 0.68
SMARCC2-212ENST00000552566 MON2Q7Z3U7 1717 aa19.29■□□□□ 0.68
SMARCC2-212ENST00000552566 BCL9O00512 1426 aa19.29■□□□□ 0.68
SMARCC2-212ENST00000552566 TNS2Q63HR2 1409 aa19.29■□□□□ 0.68
SMARCC2-212ENST00000552566 FBLN1P23142 703 aa19.29■□□□□ 0.68
SMARCC2-212ENST00000552566 TXNRD1Q16881 649 aa19.29■□□□□ 0.68
SMARCC2-212ENST00000552566 ABCC6O95255 1503 aa19.29■□□□□ 0.68
SMARCC2-212ENST00000552566 PEAK1Q9H792 1746 aa19.28■□□□□ 0.68
SMARCC2-212ENST00000552566 AMPHP49418 695 aa19.28■□□□□ 0.68
SMARCC2-212ENST00000552566 USP47Q96K76 1375 aa19.28■□□□□ 0.68
SMARCC2-212ENST00000552566 MAP3K19Q56UN5 1328 aa19.26■□□□□ 0.67
SMARCC2-212ENST00000552566 DDX54Q8TDD1 881 aaKnown RBP19.26■□□□□ 0.67
SMARCC2-212ENST00000552566 STK32BQ9NY57 414 aa19.26■□□□□ 0.67
SMARCC2-212ENST00000552566 RREB1Q92766 1687 aa19.26■□□□□ 0.67
SMARCC2-212ENST00000552566 GGNBP2Q9H3C7 697 aa19.25■□□□□ 0.67
SMARCC2-212ENST00000552566 NUP188Q5SRE5 1749 aa19.25■□□□□ 0.67
SMARCC2-212ENST00000552566 ANKRD36BQ8N2N9 1353 aa19.24■□□□□ 0.67
SMARCC2-212ENST00000552566 HSPA5P11021 654 aaKnown RBP19.24■□□□□ 0.67
SMARCC2-212ENST00000552566 HOXC9P31274 260 aa19.24■□□□□ 0.67
SMARCC2-212ENST00000552566 PDGFDQ9GZP0 370 aaPredicted RBP19.24■□□□□ 0.67
SMARCC2-212ENST00000552566 ZBTB7AO95365 584 aa19.23■□□□□ 0.67
SMARCC2-212ENST00000552566 RRS1Q15050 365 aaKnown RBP19.23■□□□□ 0.67
SMARCC2-212ENST00000552566 CDCA8Q53HL2 280 aa19.22■□□□□ 0.67
SMARCC2-212ENST00000552566 FYB1O15117 783 aa19.21■□□□□ 0.67
SMARCC2-212ENST00000552566 SLC15A2Q16348 729 aa19.21■□□□□ 0.67
SMARCC2-212ENST00000552566 ATF5Q9Y2D1 282 aaPredicted RBP19.21■□□□□ 0.67
SMARCC2-212ENST00000552566 RGPD5Q99666 1765 aa19.2■□□□□ 0.66
SMARCC2-212ENST00000552566 ZNF316A6NFI3 1004 aaPredicted RBP19.19■□□□□ 0.66
SMARCC2-212ENST00000552566 SYTL4Q96C24 671 aaPredicted RBP19.19■□□□□ 0.66
SMARCC2-212ENST00000552566 USP54Q70EL1 1684 aa19.19■□□□□ 0.66
SMARCC2-212ENST00000552566 WNK3Q9BYP7 1800 aa19.17■□□□□ 0.66
SMARCC2-212ENST00000552566 DCAF8L1A6NGE4 600 aa19.17■□□□□ 0.66
SMARCC2-212ENST00000552566 USHBP1Q8N6Y0 703 aa19.17■□□□□ 0.66
SMARCC2-212ENST00000552566 NBPF6Q5VWK0 638 aa19.16■□□□□ 0.66
SMARCC2-212ENST00000552566 ZCRB1Q8TBF4 217 aaKnown RBP19.16■□□□□ 0.66
SMARCC2-212ENST00000552566 NBPF4Q96M43 638 aa19.16■□□□□ 0.66
SMARCC2-212ENST00000552566 PRIM1P49642 420 aaKnown RBP19.15■□□□□ 0.66
SMARCC2-212ENST00000552566 POLR3GLQ9BT43 218 aa19.15■□□□□ 0.66
SMARCC2-212ENST00000552566 RTL1A6NKG5 1358 aa19.14■□□□□ 0.65
SMARCC2-212ENST00000552566 LTN1O94822 1766 aa19.14■□□□□ 0.65
SMARCC2-212ENST00000552566 HSP90AB2PQ58FF8 381 aa19.13■□□□□ 0.65
SMARCC2-212ENST00000552566 RAPGEF4Q8WZA2 1011 aa19.13■□□□□ 0.65
SMARCC2-212ENST00000552566 CARD14Q9BXL6 1004 aa19.13■□□□□ 0.65
SMARCC2-212ENST00000552566 LRRC4BQ9NT99 713 aa19.13■□□□□ 0.65
SMARCC2-212ENST00000552566 SBF2Q86WG5 1849 aa19.12■□□□□ 0.65
SMARCC2-212ENST00000552566 RGPD3A6NKT7 1758 aaPredicted RBP19.12■□□□□ 0.65
SMARCC2-212ENST00000552566 RGPD4Q7Z3J3 1758 aa19.12■□□□□ 0.65
SMARCC2-212ENST00000552566 SMG6Q86US8 1419 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms