RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 APPP05067 770 aa13.23□□□□□ -0.29
TGFBR1-209ENST00000552516 RNF214Q8ND24 703 aa13.23□□□□□ -0.29
TGFBR1-209ENST00000552516 GBP4Q96PP9 640 aa13.23□□□□□ -0.29
TGFBR1-209ENST00000552516 ZRSR1Q15695 479 aaKnown RBP13.23□□□□□ -0.29
TGFBR1-209ENST00000552516 G3BP1Q13283 466 aaKnown RBP eCLIP13.23□□□□□ -0.29
TGFBR1-209ENST00000552516 VPS37CA5D8V6 355 aaPredicted RBP13.22□□□□□ -0.29
TGFBR1-209ENST00000552516 CCDC30Q5VVM6 783 aa13.22□□□□□ -0.29
TGFBR1-209ENST00000552516 GAS2L2Q8NHY3 880 aa13.22□□□□□ -0.29
TGFBR1-209ENST00000552516 GOLGA6L3A6NEY3 463 aa13.22□□□□□ -0.29
TGFBR1-209ENST00000552516 ST18O60284 1047 aa13.22□□□□□ -0.29
TGFBR1-209ENST00000552516 TAF7Q15545 349 aaPredicted RBP13.22□□□□□ -0.29
TGFBR1-209ENST00000552516 MEIS3Q99687 375 aa13.22□□□□□ -0.29
TGFBR1-209ENST00000552516 ATP5J2-PTCD1G3V325 749 aa13.22□□□□□ -0.29
TGFBR1-209ENST00000552516 STK3Q13188 491 aa13.22□□□□□ -0.29
TGFBR1-209ENST00000552516 EIF4A2Q14240 407 aaKnown RBP13.22□□□□□ -0.29
TGFBR1-209ENST00000552516 MBD5Q9P267 1494 aa13.21□□□□□ -0.29
TGFBR1-209ENST00000552516 ORAI2Q96SN7 254 aa13.21□□□□□ -0.29
TGFBR1-209ENST00000552516 GNL2Q13823 731 aaKnown RBP13.21□□□□□ -0.29
TGFBR1-209ENST00000552516 DUOX2Q9NRD8 1548 aa13.21□□□□□ -0.29
TGFBR1-209ENST00000552516 LTKP29376 864 aa13.2□□□□□ -0.3
TGFBR1-209ENST00000552516 CREBRFQ8IUR6 639 aa13.2□□□□□ -0.3
TGFBR1-209ENST00000552516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.2□□□□□ -0.35e-7■■■■□ 23.8
TGFBR1-209ENST00000552516 CWC27Q6UX04 472 aaKnown RBP13.2□□□□□ -0.3
TGFBR1-209ENST00000552516 DRC7Q8IY82 874 aa13.2□□□□□ -0.3
TGFBR1-209ENST00000552516 ANO8Q9HCE9 1232 aaPredicted RBP13.2□□□□□ -0.3
TGFBR1-209ENST00000552516 NKTRP30414 1462 aaKnown RBP13.2□□□□□ -0.3
TGFBR1-209ENST00000552516 BICDL1Q6ZP65 573 aa13.2□□□□□ -0.3
TGFBR1-209ENST00000552516 LRRFIP2Q9Y608 721 aaKnown RBP13.2□□□□□ -0.3
TGFBR1-209ENST00000552516 GNAT3A8MTJ3 354 aa13.2□□□□□ -0.3
TGFBR1-209ENST00000552516 GNAI2P04899 355 aa13.19□□□□□ -0.3
TGFBR1-209ENST00000552516 ABCC2Q92887 1545 aa13.19□□□□□ -0.3
TGFBR1-209ENST00000552516 ITSN2Q9NZM3 1697 aa13.19□□□□□ -0.3
TGFBR1-209ENST00000552516 PLEKHO1Q53GL0 409 aaPredicted RBP13.19□□□□□ -0.3
TGFBR1-209ENST00000552516 GPATCH3Q96I76 525 aa13.19□□□□□ -0.3
TGFBR1-209ENST00000552516 ARHGEF12Q9NZN5 1544 aa13.19□□□□□ -0.3
TGFBR1-209ENST00000552516 CEBPZQ03701 1054 aaKnown RBP13.19□□□□□ -0.3
TGFBR1-209ENST00000552516 CABP4P57796 275 aa13.19□□□□□ -0.3
TGFBR1-209ENST00000552516 RAD21O60216 631 aa13.18□□□□□ -0.3
TGFBR1-209ENST00000552516 MTHFSDQ2M296 383 aaKnown RBP13.18□□□□□ -0.3
TGFBR1-209ENST00000552516 PPIP5K1Q6PFW1 1433 aa13.18□□□□□ -0.3
TGFBR1-209ENST00000552516 G2E3Q7L622 706 aa13.18□□□□□ -0.3
TGFBR1-209ENST00000552516 CCDC8Q9H0W5 538 aaPredicted RBP13.18□□□□□ -0.3
TGFBR1-209ENST00000552516 TTC21BQ7Z4L5 1316 aa13.18□□□□□ -0.3
TGFBR1-209ENST00000552516 WASHC4Q2M389 1173 aa13.18□□□□□ -0.3
TGFBR1-209ENST00000552516 LRPPRCP42704 1394 aaKnown RBP13.17□□□□□ -0.3
TGFBR1-209ENST00000552516 CDC45O75419 566 aa13.17□□□□□ -0.3
TGFBR1-209ENST00000552516 FSD1Q9BTV5 496 aa13.17□□□□□ -0.3
TGFBR1-209ENST00000552516 OTUD7AQ8TE49 926 aaPredicted RBP13.17□□□□□ -0.3
TGFBR1-209ENST00000552516 SRCIN1Q9C0H9 1055 aa13.17□□□□□ -0.3
TGFBR1-209ENST00000552516 ZNF518AQ6AHZ1 1483 aa13.17□□□□□ -0.3
TGFBR1-209ENST00000552516 SPATA31E1Q6ZUB1 1445 aa13.17□□□□□ -0.3
TGFBR1-209ENST00000552516 TTC37Q6PGP7 1564 aa13.17□□□□□ -0.3
TGFBR1-209ENST00000552516 TATP17735 454 aaPredicted RBP13.17□□□□□ -0.3
TGFBR1-209ENST00000552516 ZBTB3Q9H5J0 574 aa13.17□□□□□ -0.3
TGFBR1-209ENST00000552516 ZMYM3Q14202 1370 aa13.16□□□□□ -0.3
TGFBR1-209ENST00000552516 INTS3Q68E01 1043 aaKnown RBP13.16□□□□□ -0.3
TGFBR1-209ENST00000552516 PI4KAP2A4QPH2 592 aa13.16□□□□□ -0.3
TGFBR1-209ENST00000552516 PI4KAP1Q8N8J0 262 aa13.16□□□□□ -0.3
TGFBR1-209ENST00000552516 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
TGFBR1-209ENST00000552516 KRT28Q7Z3Y7 464 aa13.16□□□□□ -0.3
TGFBR1-209ENST00000552516 GPTP24298 496 aa13.15□□□□□ -0.3
TGFBR1-209ENST00000552516 RIMS2Q9UQ26 1411 aa13.15□□□□□ -0.3
TGFBR1-209ENST00000552516 TNRQ92752 1358 aa13.15□□□□□ -0.3
TGFBR1-209ENST00000552516 DDX58O95786 925 aaKnown RBP13.15□□□□□ -0.3
TGFBR1-209ENST00000552516 MAGI2Q86UL8 1455 aa13.15□□□□□ -0.3
TGFBR1-209ENST00000552516 CLASRPQ8N2M8 674 aaKnown RBP13.15□□□□□ -0.3
TGFBR1-209ENST00000552516 EYA1Q99502 592 aa13.15□□□□□ -0.3
TGFBR1-209ENST00000552516 PHAXQ9H814 394 aaKnown RBP13.15□□□□□ -0.3
TGFBR1-209ENST00000552516 AACSQ86V21 672 aa13.14□□□□□ -0.31
TGFBR1-209ENST00000552516 TCEANC2Q96MN5 208 aa13.14□□□□□ -0.31
TGFBR1-209ENST00000552516 BOLA2Q9H3K6 86 aa13.14□□□□□ -0.31
TGFBR1-209ENST00000552516 REC8O95072 547 aa13.14□□□□□ -0.31
TGFBR1-209ENST00000552516 NPATQ14207 1427 aa13.14□□□□□ -0.31
TGFBR1-209ENST00000552516 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
TGFBR1-209ENST00000552516 ASXL1Q8IXJ9 1541 aa13.14□□□□□ -0.31
TGFBR1-209ENST00000552516 MAP3K19Q56UN5 1328 aa13.14□□□□□ -0.31
TGFBR1-209ENST00000552516 PRPF40AO75400 957 aaKnown RBP13.14□□□□□ -0.31
TGFBR1-209ENST00000552516 FLIIQ13045 1269 aa13.14□□□□□ -0.31
TGFBR1-209ENST00000552516 MYD88Q99836 296 aa13.14□□□□□ -0.31
TGFBR1-209ENST00000552516 LRRCC1Q9C099 1032 aa13.14□□□□□ -0.31
TGFBR1-209ENST00000552516 PLA2R1Q13018 1463 aa13.13□□□□□ -0.31
TGFBR1-209ENST00000552516 FKBP4Q02790 459 aaKnown RBP eCLIP13.13□□□□□ -0.31
TGFBR1-209ENST00000552516 SAMD9LQ8IVG5 1584 aa13.13□□□□□ -0.31
TGFBR1-209ENST00000552516 CHPF2Q9P2E5 772 aa13.13□□□□□ -0.31
TGFBR1-209ENST00000552516 TRIM35Q9UPQ4 493 aa13.13□□□□□ -0.31
TGFBR1-209ENST00000552516 ATP2B1P20020 1258 aa13.13□□□□□ -0.31
TGFBR1-209ENST00000552516 CAVIN1Q6NZI2 390 aaKnown RBP13.13□□□□□ -0.31
TGFBR1-209ENST00000552516 PA2G4Q9UQ80 394 aaKnown RBP13.13□□□□□ -0.31
TGFBR1-209ENST00000552516 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
TGFBR1-209ENST00000552516 CHMP5Q9NZZ3 219 aa13.13□□□□□ -0.31
TGFBR1-209ENST00000552516 GDPD2Q9HCC8 539 aa13.12□□□□□ -0.31
TGFBR1-209ENST00000552516 WWC3Q9ULE0 1092 aa13.12□□□□□ -0.31
TGFBR1-209ENST00000552516 ANKRD36BQ8N2N9 1353 aa13.12□□□□□ -0.31
TGFBR1-209ENST00000552516 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
TGFBR1-209ENST00000552516 TBC1D2Q9BYX2 928 aa13.12□□□□□ -0.31
TGFBR1-209ENST00000552516 GNAI3P08754 354 aa13.12□□□□□ -0.31
TGFBR1-209ENST00000552516 ANKRD24Q8TF21 1146 aa13.12□□□□□ -0.31
TGFBR1-209ENST00000552516 LGR6Q9HBX8 967 aa13.12□□□□□ -0.31
TGFBR1-209ENST00000552516 H3BQV1 296 aa13.11□□□□□ -0.31
TGFBR1-209ENST00000552516 CWF19L2Q2TBE0 894 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms