RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 SOX12O15370 315 aa12.93□□□□□ -0.34
LETMD1-228ENST00000550929 TRIM37O94972 964 aa12.93□□□□□ -0.34
LETMD1-228ENST00000550929 SSH2Q76I76 1423 aa12.93□□□□□ -0.34
LETMD1-228ENST00000550929 CAMTA1Q9Y6Y1 1673 aa12.92□□□□□ -0.34
LETMD1-228ENST00000550929 NRKQ7Z2Y5 1582 aa12.91□□□□□ -0.34
LETMD1-228ENST00000550929 USP6P35125 1406 aa12.91□□□□□ -0.34
LETMD1-228ENST00000550929 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
LETMD1-228ENST00000550929 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
LETMD1-228ENST00000550929 SP7Q8TDD2 431 aaPredicted RBP12.91□□□□□ -0.34
LETMD1-228ENST00000550929 TRPM1Q7Z4N2 1603 aa12.91□□□□□ -0.34
LETMD1-228ENST00000550929 CPDO75976 1380 aa12.91□□□□□ -0.34
LETMD1-228ENST00000550929 EZH2Q15910 746 aaKnown RBP12.9□□□□□ -0.34
LETMD1-228ENST00000550929 CARD11Q9BXL7 1154 aa12.9□□□□□ -0.34
LETMD1-228ENST00000550929 THSD7AQ9UPZ6 1657 aa12.9□□□□□ -0.35
LETMD1-228ENST00000550929 TTC21BQ7Z4L5 1316 aa12.89□□□□□ -0.35
LETMD1-228ENST00000550929 SRCAPQ6ZRS2 3230 aa12.89□□□□□ -0.35
LETMD1-228ENST00000550929 FAM196AQ6ZSG2 479 aa12.89□□□□□ -0.35
LETMD1-228ENST00000550929 BARGINQ6ZT62 677 aa12.89□□□□□ -0.35
LETMD1-228ENST00000550929 APBA3O96018 575 aa12.88□□□□□ -0.35
LETMD1-228ENST00000550929 R3HDM1Q15032 1099 aaKnown RBP12.88□□□□□ -0.35
LETMD1-228ENST00000550929 AXIN2Q9Y2T1 843 aa12.88□□□□□ -0.35
LETMD1-228ENST00000550929 BRD4O60885 1362 aaPredicted RBP12.87□□□□□ -0.35
LETMD1-228ENST00000550929 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
LETMD1-228ENST00000550929 TOM1L2Q6ZVM7 507 aa12.86□□□□□ -0.35
LETMD1-228ENST00000550929 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.86□□□□□ -0.35
LETMD1-228ENST00000550929 TMC1Q8TDI8 760 aa12.86□□□□□ -0.35
LETMD1-228ENST00000550929 LMO7Q8WWI1 1683 aa12.86□□□□□ -0.35
LETMD1-228ENST00000550929 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
LETMD1-228ENST00000550929 TONSLQ96HA7 1378 aa12.85□□□□□ -0.35
LETMD1-228ENST00000550929 CAMKK2Q96RR4 588 aa12.85□□□□□ -0.35
LETMD1-228ENST00000550929 THRAP3Q9Y2W1 955 aaKnown RBP12.85□□□□□ -0.35
LETMD1-228ENST00000550929 AATKQ6ZMQ8 1374 aa12.85□□□□□ -0.35
LETMD1-228ENST00000550929 KTN1Q86UP2 1357 aaKnown RBP12.85□□□□□ -0.35
LETMD1-228ENST00000550929 CSB-PGBD3P0DP91 1061 aa12.84□□□□□ -0.35
LETMD1-228ENST00000550929 SLIT3O75094 1523 aa12.84□□□□□ -0.35
LETMD1-228ENST00000550929 CRB1P82279 1406 aa12.83□□□□□ -0.35
LETMD1-228ENST00000550929 ARHGEF25Q86VW2 580 aa12.83□□□□□ -0.36
LETMD1-228ENST00000550929 SLC12A5Q9H2X9 1139 aa12.83□□□□□ -0.36
LETMD1-228ENST00000550929 PIK3C2AO00443 1686 aa12.83□□□□□ -0.36
LETMD1-228ENST00000550929 HAX1O00165 279 aa12.82□□□□□ -0.36
LETMD1-228ENST00000550929 NME9Q86XW9 330 aa12.82□□□□□ -0.36
LETMD1-228ENST00000550929 KCNH5Q8NCM2 988 aa12.82□□□□□ -0.36
LETMD1-228ENST00000550929 RGPD1P0DJD0 1748 aa12.82□□□□□ -0.36
LETMD1-228ENST00000550929 TTC21AQ8NDW8 1320 aa12.82□□□□□ -0.36
LETMD1-228ENST00000550929 CPSF1Q10570 1443 aaKnown RBP12.82□□□□□ -0.36
LETMD1-228ENST00000550929 DDB1Q16531 1140 aa12.81□□□□□ -0.36
LETMD1-228ENST00000550929 WDR17Q8IZU2 1322 aa12.81□□□□□ -0.36
LETMD1-228ENST00000550929 DISP2A7MBM2 1401 aa12.81□□□□□ -0.36
LETMD1-228ENST00000550929 TNS1Q9HBL0 1735 aaKnown RBP12.8□□□□□ -0.36
LETMD1-228ENST00000550929 PRKAR2AP13861 404 aaKnown RBP12.8□□□□□ -0.36
LETMD1-228ENST00000550929 PTF1AQ7RTS3 328 aa12.8□□□□□ -0.36
LETMD1-228ENST00000550929 HDGFL2Q7Z4V5 671 aaPredicted RBP12.8□□□□□ -0.36
LETMD1-228ENST00000550929 TRIM26Q12899 539 aaPredicted RBP12.79□□□□□ -0.36
LETMD1-228ENST00000550929 MARCH10Q8NA82 808 aaPredicted RBP12.79□□□□□ -0.36
LETMD1-228ENST00000550929 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
LETMD1-228ENST00000550929 CARD10Q9BWT7 1032 aa12.78□□□□□ -0.36
LETMD1-228ENST00000550929 SBNO2Q9Y2G9 1366 aa12.78□□□□□ -0.36
LETMD1-228ENST00000550929 COL18A1P39060 1754 aa12.78□□□□□ -0.36
LETMD1-228ENST00000550929 AKAP12Q02952 1782 aa12.78□□□□□ -0.36
LETMD1-228ENST00000550929 NBPF14Q5TI25 921 aa12.77□□□□□ -0.37
LETMD1-228ENST00000550929 CD163L1Q9NR16 1453 aa12.77□□□□□ -0.37
LETMD1-228ENST00000550929 NFAT5O94916 1531 aa12.76□□□□□ -0.37
LETMD1-228ENST00000550929 OVOS2A0A0G2JMS6 1433 aa12.76□□□□□ -0.37
LETMD1-228ENST00000550929 OVOS2A0A0J9YW53 1432 aa12.76□□□□□ -0.37
LETMD1-228ENST00000550929 OVOS2Q6IE36 1432 aa12.76□□□□□ -0.37
LETMD1-228ENST00000550929 EXOC5O00471 708 aa12.76□□□□□ -0.37
LETMD1-228ENST00000550929 NLRP2Q9NX02 1062 aa12.76□□□□□ -0.37
LETMD1-228ENST00000550929 TERF2IPQ9NYB0 399 aa12.76□□□□□ -0.37
LETMD1-228ENST00000550929 USP31Q70CQ4 1352 aa12.75□□□□□ -0.37
LETMD1-228ENST00000550929 TESK2Q96S53 571 aa12.75□□□□□ -0.37
LETMD1-228ENST00000550929 PARP4Q9UKK3 1724 aaKnown RBP12.75□□□□□ -0.37
LETMD1-228ENST00000550929 A0A1W2PP64 1363 aa12.74□□□□□ -0.37
LETMD1-228ENST00000550929 PARD3Q8TEW0 1356 aa12.74□□□□□ -0.37
LETMD1-228ENST00000550929 FBLN1P23142 703 aa12.74□□□□□ -0.37
LETMD1-228ENST00000550929 ANKRD24Q8TF21 1146 aa12.74□□□□□ -0.37
LETMD1-228ENST00000550929 LTV1Q96GA3 475 aaPredicted RBP12.74□□□□□ -0.37
LETMD1-228ENST00000550929 CDCA7Q9BWT1 371 aaPredicted RBP12.74□□□□□ -0.37
LETMD1-228ENST00000550929 RGPD5Q99666 1765 aa12.74□□□□□ -0.37
LETMD1-228ENST00000550929 LRRC37A3O60309 1634 aa12.73□□□□□ -0.37
LETMD1-228ENST00000550929 C11orf95C9JLR9 678 aaPredicted RBP12.73□□□□□ -0.37
LETMD1-228ENST00000550929 BCL11BQ9C0K0 894 aaPredicted RBP12.73□□□□□ -0.37
LETMD1-228ENST00000550929 MON2Q7Z3U7 1717 aa12.73□□□□□ -0.37
LETMD1-228ENST00000550929 EDC4Q6P2E9 1401 aaKnown RBP12.73□□□□□ -0.37
LETMD1-228ENST00000550929 LRP5O75197 1615 aa12.72□□□□□ -0.37
LETMD1-228ENST00000550929 KCNQ2O43526 872 aa12.72□□□□□ -0.37
LETMD1-228ENST00000550929 EVX2Q03828 476 aa12.72□□□□□ -0.37
LETMD1-228ENST00000550929 ACSBG1Q96GR2 724 aa12.72□□□□□ -0.37
LETMD1-228ENST00000550929 CCDC7Q96M83 1385 aa12.72□□□□□ -0.37
LETMD1-228ENST00000550929 ERBB3P21860 1342 aa12.72□□□□□ -0.37
LETMD1-228ENST00000550929 PLSCR1O15162 318 aa12.71□□□□□ -0.37
LETMD1-228ENST00000550929 PROM2Q8N271 834 aa12.71□□□□□ -0.37
LETMD1-228ENST00000550929 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.37
LETMD1-228ENST00000550929 ANO8Q9HCE9 1232 aaPredicted RBP12.71□□□□□ -0.37
LETMD1-228ENST00000550929 PEAK1Q9H792 1746 aa12.71□□□□□ -0.38
LETMD1-228ENST00000550929 IL2RBP14784 551 aa12.69□□□□□ -0.38
LETMD1-228ENST00000550929 COG3Q96JB2 828 aa12.69□□□□□ -0.38
LETMD1-228ENST00000550929 NUP188Q5SRE5 1749 aa12.69□□□□□ -0.38
LETMD1-228ENST00000550929 RREB1Q92766 1687 aa12.69□□□□□ -0.38
LETMD1-228ENST00000550929 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
LETMD1-228ENST00000550929 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms