RNA–Protein interactions for RNA: ENST00000550884.2

AC087888.1-201, humanhuman

BASIC

Gene AC087888.1, Length 1,254 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087888.1-201ENST00000550884 CCDC116Q8IYX3 515 aa11.39□□□□□ -0.59
AC087888.1-201ENST00000550884 GOPCQ9HD26 462 aa11.38□□□□□ -0.59
AC087888.1-201ENST00000550884 ZC3H4Q9UPT8 1303 aaKnown RBP11.37□□□□□ -0.59
AC087888.1-201ENST00000550884 BRPF1P55201 1214 aaPredicted RBP11.37□□□□□ -0.59
AC087888.1-201ENST00000550884 ZBTB33Q86T24 672 aa11.37□□□□□ -0.59
AC087888.1-201ENST00000550884 LINC00528Q8N1L1 170 aa11.37□□□□□ -0.59
AC087888.1-201ENST00000550884 ERBB4Q15303 1308 aa11.36□□□□□ -0.59
AC087888.1-201ENST00000550884 H3BM21 787 aa11.36□□□□□ -0.59
AC087888.1-201ENST00000550884 PPP1R26Q5T8A7 1209 aaPredicted RBP11.36□□□□□ -0.59
AC087888.1-201ENST00000550884 ADAM32Q8TC27 787 aa11.36□□□□□ -0.59
AC087888.1-201ENST00000550884 KCTD15Q96SI1 283 aaPredicted RBP11.36□□□□□ -0.59
AC087888.1-201ENST00000550884 TRIM34Q9BYJ4 488 aa11.36□□□□□ -0.59
AC087888.1-201ENST00000550884 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
AC087888.1-201ENST00000550884 CBLBQ13191 982 aa11.35□□□□□ -0.59
AC087888.1-201ENST00000550884 BMP2P12643 396 aa11.34□□□□□ -0.59
AC087888.1-201ENST00000550884 PTK2Q05397 1052 aa11.34□□□□□ -0.59
AC087888.1-201ENST00000550884 NPAS3Q8IXF0 933 aa11.34□□□□□ -0.59
AC087888.1-201ENST00000550884 SLC16A10Q8TF71 515 aa11.34□□□□□ -0.59
AC087888.1-201ENST00000550884 SLC10A4Q96EP9 437 aa11.34□□□□□ -0.59
AC087888.1-201ENST00000550884 PCMTD1Q96MG8 357 aaPredicted RBP11.34□□□□□ -0.59
AC087888.1-201ENST00000550884 GMPRP36959 345 aa11.33□□□□□ -0.6
AC087888.1-201ENST00000550884 INTS6LQ5JSJ4 861 aaKnown RBP11.33□□□□□ -0.6
AC087888.1-201ENST00000550884 GPSM3Q9Y4H4 160 aa11.33□□□□□ -0.6
AC087888.1-201ENST00000550884 SOS2Q07890 1332 aaPredicted RBP11.33□□□□□ -0.6
AC087888.1-201ENST00000550884 DNMT3LQ9UJW3 386 aa11.32□□□□□ -0.6
AC087888.1-201ENST00000550884 Q6ZVU0 165 aa11.31□□□□□ -0.6
AC087888.1-201ENST00000550884 MAN1A2O60476 641 aa11.3□□□□□ -0.6
AC087888.1-201ENST00000550884 UPP2O95045 317 aa11.3□□□□□ -0.6
AC087888.1-201ENST00000550884 GJD4Q96KN9 370 aaPredicted RBP11.3□□□□□ -0.6
AC087888.1-201ENST00000550884 TSEN34Q9BSV6 310 aaKnown RBP11.3□□□□□ -0.6
AC087888.1-201ENST00000550884 LORP23490 312 aaPredicted RBP11.29□□□□□ -0.6
AC087888.1-201ENST00000550884 IRF7Q92985 503 aa11.29□□□□□ -0.6
AC087888.1-201ENST00000550884 CDV3Q9UKY7 258 aaKnown RBP11.29□□□□□ -0.6
AC087888.1-201ENST00000550884 INSM1Q01101 510 aaPredicted RBP11.28□□□□□ -0.6
AC087888.1-201ENST00000550884 TMEM259Q4ZIN3 620 aa11.28□□□□□ -0.6
AC087888.1-201ENST00000550884 TMPRSS4Q9NRS4 437 aa11.28□□□□□ -0.6
AC087888.1-201ENST00000550884 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
AC087888.1-201ENST00000550884 AGBL1Q96MI9 1066 aa11.26□□□□□ -0.61
AC087888.1-201ENST00000550884 TPRNQ4KMQ1 711 aa11.25□□□□□ -0.61
AC087888.1-201ENST00000550884 SPINT1O43278 529 aa11.24□□□□□ -0.61
AC087888.1-201ENST00000550884 PPFIA3O75145 1194 aa11.24□□□□□ -0.61
AC087888.1-201ENST00000550884 RAB15P59190 212 aa11.24□□□□□ -0.61
AC087888.1-201ENST00000550884 DHX9Q08211 1270 aaKnown RBP11.24□□□□□ -0.61
AC087888.1-201ENST00000550884 STK17AQ9UEE5 414 aa11.24□□□□□ -0.61
AC087888.1-201ENST00000550884 FIGNL2A6NMB9 653 aa11.23□□□□□ -0.61
AC087888.1-201ENST00000550884 TTLL8A6PVC2 850 aa11.23□□□□□ -0.61
AC087888.1-201ENST00000550884 ESPNB1AK53 854 aa11.23□□□□□ -0.61
AC087888.1-201ENST00000550884 DZIP3Q86Y13 1208 aaKnown RBP11.23□□□□□ -0.61
AC087888.1-201ENST00000550884 ZNF784Q8NCA9 323 aaPredicted RBP11.23□□□□□ -0.61
AC087888.1-201ENST00000550884 PNMA1Q8ND90 353 aa11.23□□□□□ -0.61
AC087888.1-201ENST00000550884 ERVH48-1M5A8F1 160 aa11.22□□□□□ -0.61
AC087888.1-201ENST00000550884 LILRA1O75019 489 aa11.22□□□□□ -0.61
AC087888.1-201ENST00000550884 VSIG8P0DPA2 414 aa11.22□□□□□ -0.61
AC087888.1-201ENST00000550884 ADD1P35611 737 aaKnown RBP11.22□□□□□ -0.61
AC087888.1-201ENST00000550884 NBPF20Q3BBV1 942 aa11.22□□□□□ -0.61
AC087888.1-201ENST00000550884 GPR37L1O60883 481 aa11.21□□□□□ -0.61
AC087888.1-201ENST00000550884 RELBQ01201 579 aa11.21□□□□□ -0.61
AC087888.1-201ENST00000550884 KDF1Q8NAX2 398 aaPredicted RBP11.21□□□□□ -0.61
AC087888.1-201ENST00000550884 FBXO45P0C2W1 286 aa11.2□□□□□ -0.62
AC087888.1-201ENST00000550884 CTSOP43234 321 aaPredicted RBP11.2□□□□□ -0.62
AC087888.1-201ENST00000550884 INSM2Q96T92 566 aaPredicted RBP11.19□□□□□ -0.62
AC087888.1-201ENST00000550884 ZBBXA8MT70 800 aa11.18□□□□□ -0.62
AC087888.1-201ENST00000550884 PTSQ03393 145 aa11.18□□□□□ -0.62
AC087888.1-201ENST00000550884 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.18□□□□□ -0.62
AC087888.1-201ENST00000550884 ZNF395Q9H8N7 513 aaPredicted RBP11.18□□□□□ -0.62
AC087888.1-201ENST00000550884 MTMR14Q8NCE2 650 aa11.17□□□□□ -0.62
AC087888.1-201ENST00000550884 GIGYF1O75420 1035 aaPredicted RBP11.16□□□□□ -0.62
AC087888.1-201ENST00000550884 ZSCAN1Q8NBB4 408 aa11.16□□□□□ -0.62
AC087888.1-201ENST00000550884 SNRKQ9NRH2 765 aa11.16□□□□□ -0.62
AC087888.1-201ENST00000550884 ADH1AP07327 375 aa11.15□□□□□ -0.62
AC087888.1-201ENST00000550884 GPR161Q8N6U8 529 aaKnown RBP11.15□□□□□ -0.62
AC087888.1-201ENST00000550884 BANK1Q8NDB2 785 aa11.14□□□□□ -0.63
AC087888.1-201ENST00000550884 CYLDQ9NQC7 956 aa11.14□□□□□ -0.63
AC087888.1-201ENST00000550884 PCDHB9Q9Y5E1 797 aa11.14□□□□□ -0.63
AC087888.1-201ENST00000550884 RNF217Q8TC41 542 aa11.13□□□□□ -0.63
AC087888.1-201ENST00000550884 PTGIRP43119 386 aa11.12□□□□□ -0.63
AC087888.1-201ENST00000550884 FOXD4L5Q5VV16 416 aaPredicted RBP11.12□□□□□ -0.63
AC087888.1-201ENST00000550884 SEPT12Q8IYM1 358 aa11.12□□□□□ -0.63
AC087888.1-201ENST00000550884 POLMQ9NP87 494 aaPredicted RBP11.12□□□□□ -0.63
AC087888.1-201ENST00000550884 SLC35F4A4IF30 521 aa11.11□□□□□ -0.63
AC087888.1-201ENST00000550884 KRT76Q01546 638 aa11.11□□□□□ -0.63
AC087888.1-201ENST00000550884 CCDC155Q8N6L0 562 aa11.11□□□□□ -0.63
AC087888.1-201ENST00000550884 NR1H3Q13133 447 aa11.1□□□□□ -0.63
AC087888.1-201ENST00000550884 SENP3-EIF4A1A0A087X0R7 540 aa11.08□□□□□ -0.64
AC087888.1-201ENST00000550884 SOCS7O14512 581 aa11.08□□□□□ -0.64
AC087888.1-201ENST00000550884 NANOS1Q8WY41 292 aaKnown RBP11.06□□□□□ -0.64
AC087888.1-201ENST00000550884 NDUFB9Q9Y6M9 179 aa11.06□□□□□ -0.64
AC087888.1-201ENST00000550884 SCTRP47872 440 aa11.05□□□□□ -0.64
AC087888.1-201ENST00000550884 ITGA6P23229 1130 aa11.04□□□□□ -0.64
AC087888.1-201ENST00000550884 ERVK-9P63128 1117 aa11.04□□□□□ -0.64
AC087888.1-201ENST00000550884 RNFT1Q5M7Z0 435 aa11.03□□□□□ -0.64
AC087888.1-201ENST00000550884 CNTNAP3BQ96NU0 1288 aa11.03□□□□□ -0.64
AC087888.1-201ENST00000550884 CNTNAP3Q9BZ76 1288 aa11.03□□□□□ -0.64
AC087888.1-201ENST00000550884 ATP5J2-PTCD1G3V325 749 aa11.02□□□□□ -0.65
AC087888.1-201ENST00000550884 VWA5B2Q8N398 1253 aa11.02□□□□□ -0.65
AC087888.1-201ENST00000550884 TBC1D2BQ9UPU7 963 aa11.02□□□□□ -0.65
AC087888.1-201ENST00000550884 FAM181BA6NEQ2 426 aa11.01□□□□□ -0.65
AC087888.1-201ENST00000550884 RNF144AP50876 292 aaPredicted RBP11.01□□□□□ -0.65
AC087888.1-201ENST00000550884 CC2D2BQ6DHV5 1058 aa11.01□□□□□ -0.65
AC087888.1-201ENST00000550884 LYSMD3Q7Z3D4 306 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms