RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 WNK3Q9BYP7 1800 aa23.7■■□□□ 1.38
SSH1-208ENST00000548522 ROCK2O75116 1388 aaKnown RBP23.68■■□□□ 1.38
SSH1-208ENST00000548522 ARHGEF25Q86VW2 580 aa23.68■■□□□ 1.38
SSH1-208ENST00000548522 MARCH10Q8NA82 808 aaPredicted RBP23.67■■□□□ 1.38
SSH1-208ENST00000548522 SBF2Q86WG5 1849 aa23.67■■□□□ 1.38
SSH1-208ENST00000548522 NFAT5O94916 1531 aa23.67■■□□□ 1.38
SSH1-208ENST00000548522 RGPD3A6NKT7 1758 aaPredicted RBP23.66■■□□□ 1.38
SSH1-208ENST00000548522 AKAP12Q02952 1782 aa23.66■■□□□ 1.38
SSH1-208ENST00000548522 RGPD4Q7Z3J3 1758 aa23.66■■□□□ 1.38
SSH1-208ENST00000548522 PDGFDQ9GZP0 370 aaPredicted RBP23.64■■□□□ 1.37
SSH1-208ENST00000548522 SPON1Q9HCB6 807 aa23.64■■□□□ 1.37
SSH1-208ENST00000548522 C11orf95C9JLR9 678 aaPredicted RBP23.63■■□□□ 1.37
SSH1-208ENST00000548522 PLSCR1O15162 318 aa23.63■■□□□ 1.37
SSH1-208ENST00000548522 KCNQ2O43526 872 aa23.63■■□□□ 1.37
SSH1-208ENST00000548522 NEUROD1Q13562 356 aa23.63■■□□□ 1.37
SSH1-208ENST00000548522 BCL11BQ9C0K0 894 aaPredicted RBP23.63■■□□□ 1.37
SSH1-208ENST00000548522 RGPD5Q99666 1765 aa23.63■■□□□ 1.37
SSH1-208ENST00000548522 CSB-PGBD3P0DP91 1061 aa23.62■■□□□ 1.37
SSH1-208ENST00000548522 PROM2Q8N271 834 aa23.62■■□□□ 1.37
SSH1-208ENST00000548522 TTC21AQ8NDW8 1320 aa23.61■■□□□ 1.37
SSH1-208ENST00000548522 UTRNP46939 3433 aa23.61■■□□□ 1.37
SSH1-208ENST00000548522 CASZ1Q86V15 1759 aa23.61■■□□□ 1.37
SSH1-208ENST00000548522 KCNH5Q8NCM2 988 aa23.61■■□□□ 1.37
SSH1-208ENST00000548522 CARD10Q9BWT7 1032 aa23.61■■□□□ 1.37
SSH1-208ENST00000548522 PPP1R1BQ9UD71 204 aaPredicted RBP23.61■■□□□ 1.37
SSH1-208ENST00000548522 KTN1Q86UP2 1357 aaKnown RBP23.61■■□□□ 1.37
SSH1-208ENST00000548522 BCL9O00512 1426 aa23.6■■□□□ 1.37
SSH1-208ENST00000548522 ZNF692Q9BU19 519 aaPredicted RBP23.6■■□□□ 1.37
SSH1-208ENST00000548522 CDCA7Q9BWT1 371 aaPredicted RBP23.58■■□□□ 1.37
SSH1-208ENST00000548522 MON2Q7Z3U7 1717 aa23.58■■□□□ 1.37
SSH1-208ENST00000548522 CD163L1Q9NR16 1453 aa23.57■■□□□ 1.36
SSH1-208ENST00000548522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.57■■□□□ 1.36
SSH1-208ENST00000548522 TNS2Q63HR2 1409 aa23.57■■□□□ 1.36
SSH1-208ENST00000548522 NINLQ9Y2I6 1382 aa23.56■■□□□ 1.36
SSH1-208ENST00000548522 ZBTB7AO95365 584 aa23.55■■□□□ 1.36
SSH1-208ENST00000548522 YY1P25490 414 aa23.55■■□□□ 1.36
SSH1-208ENST00000548522 ABCC6O95255 1503 aa23.54■■□□□ 1.36
SSH1-208ENST00000548522 NME9Q86XW9 330 aa23.54■■□□□ 1.36
SSH1-208ENST00000548522 CCDC7Q96M83 1385 aa23.53■■□□□ 1.36
SSH1-208ENST00000548522 SBNO2Q9Y2G9 1366 aa23.53■■□□□ 1.36
SSH1-208ENST00000548522 TXNRD1Q16881 649 aa23.53■■□□□ 1.36
SSH1-208ENST00000548522 MYOM1P52179 1685 aa23.52■■□□□ 1.36
SSH1-208ENST00000548522 EXOC5O00471 708 aa23.52■■□□□ 1.36
SSH1-208ENST00000548522 USP31Q70CQ4 1352 aa23.52■■□□□ 1.36
SSH1-208ENST00000548522 ERBB3P21860 1342 aa23.51■■□□□ 1.35
SSH1-208ENST00000548522 USP54Q70EL1 1684 aa23.51■■□□□ 1.35
SSH1-208ENST00000548522 PTGER2P43116 358 aa23.5■■□□□ 1.35
SSH1-208ENST00000548522 NHSQ6T4R5 1651 aa23.49■■□□□ 1.35
SSH1-208ENST00000548522 ACSBG1Q96GR2 724 aa23.49■■□□□ 1.35
SSH1-208ENST00000548522 NLRP2Q9NX02 1062 aa23.48■■□□□ 1.35
SSH1-208ENST00000548522 ATF5Q9Y2D1 282 aaPredicted RBP23.48■■□□□ 1.35
SSH1-208ENST00000548522 TMC1Q8TDI8 760 aa23.47■■□□□ 1.35
SSH1-208ENST00000548522 CARD11Q9BXL7 1154 aa23.47■■□□□ 1.35
SSH1-208ENST00000548522 STK32BQ9NY57 414 aa23.47■■□□□ 1.35
SSH1-208ENST00000548522 LTN1O94822 1766 aa23.46■■□□□ 1.35
SSH1-208ENST00000548522 SLC15A2Q16348 729 aa23.46■■□□□ 1.35
SSH1-208ENST00000548522 SLC12A5Q9H2X9 1139 aa23.46■■□□□ 1.35
SSH1-208ENST00000548522 A0A1W2PP64 1363 aa23.45■■□□□ 1.34
SSH1-208ENST00000548522 ANKRD24Q8TF21 1146 aa23.44■■□□□ 1.34
SSH1-208ENST00000548522 PAPPAQ13219 1627 aa23.44■■□□□ 1.34
SSH1-208ENST00000548522 EDC4Q6P2E9 1401 aaKnown RBP23.43■■□□□ 1.34
SSH1-208ENST00000548522 IL2RBP14784 551 aa23.42■■□□□ 1.34
SSH1-208ENST00000548522 HDGFL2Q7Z4V5 671 aaPredicted RBP23.41■■□□□ 1.34
SSH1-208ENST00000548522 BTAF1O14981 1849 aa23.39■■□□□ 1.33
SSH1-208ENST00000548522 DCAF8L1A6NGE4 600 aa23.39■■□□□ 1.33
SSH1-208ENST00000548522 SGIP1Q9BQI5 828 aa23.39■■□□□ 1.33
SSH1-208ENST00000548522 FHDC1Q9C0D6 1143 aaPredicted RBP23.39■■□□□ 1.33
SSH1-208ENST00000548522 ZNF827Q17R98 1081 aa23.38■■□□□ 1.33
SSH1-208ENST00000548522 MTFR1LQ9H019 292 aa23.38■■□□□ 1.33
SSH1-208ENST00000548522 LRRC4BQ9NT99 713 aa23.36■■□□□ 1.33
SSH1-208ENST00000548522 GOLGB1Q14789 3259 aaKnown RBP23.35■■□□□ 1.33
SSH1-208ENST00000548522 LTV1Q96GA3 475 aaPredicted RBP23.35■■□□□ 1.33
SSH1-208ENST00000548522 SYT17Q9BSW7 474 aa23.35■■□□□ 1.33
SSH1-208ENST00000548522 TERF2IPQ9NYB0 399 aa23.35■■□□□ 1.33
SSH1-208ENST00000548522 TONSLQ96HA7 1378 aa23.33■■□□□ 1.33
SSH1-208ENST00000548522 FBLN1P23142 703 aa23.33■■□□□ 1.33
SSH1-208ENST00000548522 DDX54Q8TDD1 881 aaKnown RBP23.32■■□□□ 1.32
SSH1-208ENST00000548522 IP6K1Q92551 441 aa23.32■■□□□ 1.32
SSH1-208ENST00000548522 TESK2Q96S53 571 aa23.32■■□□□ 1.32
SSH1-208ENST00000548522 MAP3K19Q56UN5 1328 aa23.31■■□□□ 1.32
SSH1-208ENST00000548522 FAM208AQ9UK61 1670 aaKnown RBP23.29■■□□□ 1.32
SSH1-208ENST00000548522 KCNQ4P56696 695 aa23.29■■□□□ 1.32
SSH1-208ENST00000548522 ARXQ96QS3 562 aa23.28■■□□□ 1.32
SSH1-208ENST00000548522 MEGF6O75095 1541 aa23.28■■□□□ 1.32
SSH1-208ENST00000548522 ST20-MTHFSA0A0A6YYL1 179 aa23.27■■□□□ 1.32
SSH1-208ENST00000548522 ZNF784Q8NCA9 323 aaPredicted RBP23.27■■□□□ 1.32
SSH1-208ENST00000548522 AKT1S1Q96B36 256 aa23.27■■□□□ 1.32
SSH1-208ENST00000548522 PUS7Q96PZ0 661 aaKnown RBP23.27■■□□□ 1.32
SSH1-208ENST00000548522 NSD2O96028 1365 aa23.27■■□□□ 1.31
SSH1-208ENST00000548522 HOXC9P31274 260 aa23.26■■□□□ 1.31
SSH1-208ENST00000548522 DOT1LQ8TEK3 1739 aa23.25■■□□□ 1.31
SSH1-208ENST00000548522 SHANK3Q9BYB0 1731 aa23.25■■□□□ 1.31
SSH1-208ENST00000548522 SYTL4Q96C24 671 aaPredicted RBP23.25■■□□□ 1.31
SSH1-208ENST00000548522 COG3Q96JB2 828 aa23.25■■□□□ 1.31
SSH1-208ENST00000548522 PNPLA7Q6ZV29 1317 aa23.24■■□□□ 1.31
SSH1-208ENST00000548522 MAP3K5Q99683 1374 aa23.24■■□□□ 1.31
SSH1-208ENST00000548522 PRIM1P49642 420 aaKnown RBP23.23■■□□□ 1.31
SSH1-208ENST00000548522 ANKRD36BQ8N2N9 1353 aa23.23■■□□□ 1.31
SSH1-208ENST00000548522 RGPD2P0DJD1 1756 aa23.22■■□□□ 1.31
SSH1-208ENST00000548522 AMPHP49418 695 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms