RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 IP6K1Q92551 441 aa38.45■■■■□ 3.75
BRF1-213ENST00000548421 NUDCQ9Y266 331 aa38.45■■■■□ 3.75
BRF1-213ENST00000548421 ABCC6O95255 1503 aa38.45■■■■□ 3.75
BRF1-213ENST00000548421 KIAA0232Q92628 1395 aa38.43■■■■□ 3.74
BRF1-213ENST00000548421 COL18A1P39060 1754 aa38.42■■■■□ 3.74
BRF1-213ENST00000548421 JCADQ9P266 1359 aa38.41■■■■□ 3.74
BRF1-213ENST00000548421 BLMP54132 1417 aaPredicted RBP38.4■■■■□ 3.74
BRF1-213ENST00000548421 IL13P35225 146 aa38.4■■■■□ 3.74
BRF1-213ENST00000548421 RGPD5Q99666 1765 aa38.39■■■■□ 3.74
BRF1-213ENST00000548421 EIF4A2Q14240 407 aaKnown RBP38.38■■■■□ 3.73
BRF1-213ENST00000548421 ADAMTS8Q9UP79 889 aa38.38■■■■□ 3.73
BRF1-213ENST00000548421 HSPA1LP34931 641 aa38.37■■■■□ 3.73
BRF1-213ENST00000548421 U2SURPO15042 1029 aaKnown RBP38.35■■■■□ 3.73
BRF1-213ENST00000548421 RGPD1P0DJD0 1748 aa38.35■■■■□ 3.73
BRF1-213ENST00000548421 PRDM11Q9NQV5 511 aa38.35■■■■□ 3.73
BRF1-213ENST00000548421 U2AF1L5P0DN76 240 aaPredicted RBP38.33■■■■□ 3.73
BRF1-213ENST00000548421 U2AF1Q01081 240 aaKnown RBP eCLIP38.33■■■■□ 3.73
BRF1-213ENST00000548421 LMO7Q8WWI1 1683 aa38.33■■■■□ 3.73
BRF1-213ENST00000548421 CHRNA2Q15822 529 aa38.31■■■■□ 3.72
BRF1-213ENST00000548421 AXIN2Q9Y2T1 843 aa38.3■■■■□ 3.72
BRF1-213ENST00000548421 COL14A1Q05707 1796 aaKnown RBP38.29■■■■□ 3.72
BRF1-213ENST00000548421 YTHDC1Q96MU7 727 aaKnown RBP38.28■■■■□ 3.72
BRF1-213ENST00000548421 LTV1Q96GA3 475 aaPredicted RBP38.27■■■■□ 3.72
BRF1-213ENST00000548421 FAM208AQ9UK61 1670 aaKnown RBP38.25■■■■□ 3.71
BRF1-213ENST00000548421 ANKRD24Q8TF21 1146 aa38.24■■■■□ 3.71
BRF1-213ENST00000548421 SPATA31A6Q5VVP1 1343 aa38.24■■■■□ 3.71
BRF1-213ENST00000548421 RGPD2P0DJD1 1756 aa38.23■■■■□ 3.71
BRF1-213ENST00000548421 ERBB3P21860 1342 aa38.23■■■■□ 3.71
BRF1-213ENST00000548421 CAMTA1Q9Y6Y1 1673 aa38.23■■■■□ 3.71
BRF1-213ENST00000548421 FAM83GA6ND36 823 aa38.22■■■■□ 3.71
BRF1-213ENST00000548421 NUTM2BA6NNL0 878 aaPredicted RBP38.22■■■■□ 3.71
BRF1-213ENST00000548421 NUTM2EB1AL46 878 aaPredicted RBP38.22■■■■□ 3.71
BRF1-213ENST00000548421 NUTM2AQ8IVF1 878 aaPredicted RBP38.22■■■■□ 3.71
BRF1-213ENST00000548421 IGSF1Q8N6C5 1336 aa38.21■■■■□ 3.71
BRF1-213ENST00000548421 EYA1Q99502 592 aa38.2■■■■□ 3.71
BRF1-213ENST00000548421 FCHSD2O94868 740 aa38.19■■■■□ 3.7
BRF1-213ENST00000548421 ADAMTS2O95450 1211 aa38.18■■■■□ 3.7
BRF1-213ENST00000548421 HMOX1P09601 288 aa38.18■■■■□ 3.7
BRF1-213ENST00000548421 PNNQ9H307 717 aaKnown RBP38.18■■■■□ 3.7
BRF1-213ENST00000548421 PLCH1Q4KWH8 1693 aa38.18■■■■□ 3.7
BRF1-213ENST00000548421 COL5A2P05997 1499 aaPredicted RBP38.17■■■■□ 3.7
BRF1-213ENST00000548421 CCDC146Q8IYE0 955 aa38.17■■■■□ 3.7
BRF1-213ENST00000548421 RSPH6AQ9H0K4 717 aa38.17■■■■□ 3.7
BRF1-213ENST00000548421 HNRNPUQ00839 825 aaKnown RBP eCLIP38.15■■■■□ 3.7
BRF1-213ENST00000548421 SULT6B1Q6IMI4 303 aa38.15■■■■□ 3.7
BRF1-213ENST00000548421 RUNDC1Q96C34 613 aa38.15■■■■□ 3.7
BRF1-213ENST00000548421 KDRP35968 1356 aa38.15■■■■□ 3.7
BRF1-213ENST00000548421 NBPF6Q5VWK0 638 aa38.12■■■■□ 3.69
BRF1-213ENST00000548421 AEBP1Q8IUX7 1158 aa38.12■■■■□ 3.69
BRF1-213ENST00000548421 NBPF4Q96M43 638 aa38.12■■■■□ 3.69
BRF1-213ENST00000548421 PLEKHF1Q96S99 279 aa38.12■■■■□ 3.69
BRF1-213ENST00000548421 CSB-PGBD3P0DP91 1061 aa38.11■■■■□ 3.69
BRF1-213ENST00000548421 LRP6O75581 1613 aa38.11■■■■□ 3.69
BRF1-213ENST00000548421 NCAPD2Q15021 1401 aa38.11■■■■□ 3.69
BRF1-213ENST00000548421 NWD2Q9ULI1 1742 aa38.1■■■■□ 3.69
BRF1-213ENST00000548421 PRKAR2BP31323 418 aa38.1■■■■□ 3.69
BRF1-213ENST00000548421 BTG4Q9NY30 223 aa38.1■■■■□ 3.69
BRF1-213ENST00000548421 WDR17Q8IZU2 1322 aa38.09■■■■□ 3.69
BRF1-213ENST00000548421 MAPK8IP3Q9UPT6 1336 aa38.08■■■■□ 3.69
BRF1-213ENST00000548421 NRAPQ86VF7 1730 aa38.07■■■■□ 3.68
BRF1-213ENST00000548421 NEFMP07197 916 aa38.06■■■■□ 3.68
BRF1-213ENST00000548421 USHBP1Q8N6Y0 703 aa38.06■■■■□ 3.68
BRF1-213ENST00000548421 EVA1CP58658 441 aa38.05■■■■□ 3.68
BRF1-213ENST00000548421 NLRP2Q9NX02 1062 aa38.05■■■■□ 3.68
BRF1-213ENST00000548421 APAF1O14727 1248 aa38.03■■■■□ 3.68
BRF1-213ENST00000548421 STRN4Q9NRL3 753 aa38.03■■■■□ 3.68
BRF1-213ENST00000548421 SLIT2O94813 1529 aa38.03■■■■□ 3.68
BRF1-213ENST00000548421 TCP11L2Q8N4U5 519 aa38.01■■■■□ 3.67
BRF1-213ENST00000548421 SENP3-EIF4A1A0A087X0R7 540 aa38■■■■□ 3.67
BRF1-213ENST00000548421 TOM1L2Q6ZVM7 507 aa38■■■■□ 3.67
BRF1-213ENST00000548421 ZBED9Q6R2W3 1325 aa37.99■■■■□ 3.67
BRF1-213ENST00000548421 CRB1P82279 1406 aa37.98■■■■□ 3.67
BRF1-213ENST00000548421 LARP1Q6PKG0 1096 aaKnown RBP37.98■■■■□ 3.67
BRF1-213ENST00000548421 PHACTR3Q96KR7 559 aa37.98■■■■□ 3.67
BRF1-213ENST00000548421 C8orf37Q96NL8 207 aa37.98■■■■□ 3.67
BRF1-213ENST00000548421 MEX3CQ5U5Q3 659 aaKnown RBP37.96■■■■□ 3.67
BRF1-213ENST00000548421 NGEFQ8N5V2 710 aa37.96■■■■□ 3.67
BRF1-213ENST00000548421 NGLY1Q96IV0 654 aa37.96■■■■□ 3.67
BRF1-213ENST00000548421 CARD10Q9BWT7 1032 aa37.96■■■■□ 3.67
BRF1-213ENST00000548421 SALL2Q9Y467 1007 aaPredicted RBP37.93■■■■□ 3.66
BRF1-213ENST00000548421 TMPOP42166 694 aaKnown RBP37.92■■■■□ 3.66
BRF1-213ENST00000548421 DLG5Q8TDM6 1919 aa37.91■■■■□ 3.66
BRF1-213ENST00000548421 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.91■■■■□ 3.66
BRF1-213ENST00000548421 RRP7AQ9Y3A4 280 aaKnown RBP37.91■■■■□ 3.66
BRF1-213ENST00000548421 NCBP3Q53F19 620 aaKnown RBP37.9■■■■□ 3.66
BRF1-213ENST00000548421 FNBP4Q8N3X1 1017 aaPredicted RBP37.9■■■■□ 3.66
BRF1-213ENST00000548421 NFE2L2Q16236 605 aa37.9■■■■□ 3.66
BRF1-213ENST00000548421 PLEKHG2Q9H7P9 1386 aa37.89■■■■□ 3.66
BRF1-213ENST00000548421 PARP4Q9UKK3 1724 aaKnown RBP37.89■■■■□ 3.66
BRF1-213ENST00000548421 NEUROD2Q15784 382 aa37.89■■■■□ 3.66
BRF1-213ENST00000548421 RAPGEF4Q8WZA2 1011 aa37.89■■■■□ 3.66
BRF1-213ENST00000548421 UNC5CLQ8IV45 518 aa37.87■■■■□ 3.65
BRF1-213ENST00000548421 BCL9LQ86UU0 1499 aa37.87■■■■□ 3.65
BRF1-213ENST00000548421 MEGF6O75095 1541 aa37.86■■■■□ 3.65
BRF1-213ENST00000548421 TATP17735 454 aaPredicted RBP37.84■■■■□ 3.65
BRF1-213ENST00000548421 RIPK4P57078 832 aa37.84■■■■□ 3.65
BRF1-213ENST00000548421 CCDC27Q2M243 656 aa37.84■■■■□ 3.65
BRF1-213ENST00000548421 GAS2L2Q8NHY3 880 aa37.84■■■■□ 3.65
BRF1-213ENST00000548421 MTHFSDQ2M296 383 aaKnown RBP37.84■■■■□ 3.65
BRF1-213ENST00000548421 WNK3Q9BYP7 1800 aa37.83■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms