RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 ABCA3Q99758 1704 aa22.6■■□□□ 1.21
ARFGAP1-220ENST00000547204 FBLN1P23142 703 aa22.59■■□□□ 1.21
ARFGAP1-220ENST00000547204 COL3A1P02461 1466 aaPredicted RBP22.59■■□□□ 1.21
ARFGAP1-220ENST00000547204 WDR43Q15061 677 aaKnown RBP eCLIP22.58■■□□□ 1.216e-7■■■□□ 17.1
ARFGAP1-220ENST00000547204 UNC5CLQ8IV45 518 aa22.58■■□□□ 1.21
ARFGAP1-220ENST00000547204 SLIT3O75094 1523 aa22.58■■□□□ 1.21
ARFGAP1-220ENST00000547204 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.58■■□□□ 1.21
ARFGAP1-220ENST00000547204 INSRP06213 1382 aa22.57■■□□□ 1.2
ARFGAP1-220ENST00000547204 EMILIN1Q9Y6C2 1016 aa22.57■■□□□ 1.2
ARFGAP1-220ENST00000547204 RRS1Q15050 365 aaKnown RBP22.57■■□□□ 1.2
ARFGAP1-220ENST00000547204 GJD4Q96KN9 370 aaPredicted RBP22.57■■□□□ 1.2
ARFGAP1-220ENST00000547204 NFAT5O94916 1531 aa22.56■■□□□ 1.2
ARFGAP1-220ENST00000547204 USP19O94966 1318 aa22.56■■□□□ 1.2
ARFGAP1-220ENST00000547204 SOX12O15370 315 aa22.56■■□□□ 1.2
ARFGAP1-220ENST00000547204 PPM1GO15355 546 aaPredicted RBP22.55■■□□□ 1.2
ARFGAP1-220ENST00000547204 KCNH5Q8NCM2 988 aa22.55■■□□□ 1.2
ARFGAP1-220ENST00000547204 PEAK1Q9H792 1746 aa22.54■■□□□ 1.2
ARFGAP1-220ENST00000547204 PLCH1Q4KWH8 1693 aa22.53■■□□□ 1.2
ARFGAP1-220ENST00000547204 BLMP54132 1417 aaPredicted RBP22.52■■□□□ 1.2
ARFGAP1-220ENST00000547204 KIF24Q5T7B8 1368 aa22.52■■□□□ 1.2
ARFGAP1-220ENST00000547204 MAP3K19Q56UN5 1328 aa22.52■■□□□ 1.2
ARFGAP1-220ENST00000547204 GLI3P10071 1580 aa22.51■■□□□ 1.19
ARFGAP1-220ENST00000547204 DIAPH1O60610 1272 aaKnown RBP22.51■■□□□ 1.19
ARFGAP1-220ENST00000547204 ADAMTS8Q9UP79 889 aa22.51■■□□□ 1.19
ARFGAP1-220ENST00000547204 NUDCQ9Y266 331 aa22.51■■□□□ 1.19
ARFGAP1-220ENST00000547204 PHRF1Q9P1Y6 1649 aaKnown RBP22.51■■□□□ 1.19
ARFGAP1-220ENST00000547204 LTN1O94822 1766 aa22.51■■□□□ 1.19
ARFGAP1-220ENST00000547204 NWD2Q9ULI1 1742 aa22.5■■□□□ 1.19
ARFGAP1-220ENST00000547204 FLT4P35916 1363 aa22.5■■□□□ 1.19
ARFGAP1-220ENST00000547204 FAM83GA6ND36 823 aa22.5■■□□□ 1.19
ARFGAP1-220ENST00000547204 HNRNPUQ00839 825 aaKnown RBP eCLIP22.5■■□□□ 1.19
ARFGAP1-220ENST00000547204 EP400Q96L91 3159 aa22.5■■□□□ 1.19
ARFGAP1-220ENST00000547204 CRYBG1Q9Y4K1 1723 aa22.5■■□□□ 1.19
ARFGAP1-220ENST00000547204 VPS72Q15906 364 aa22.49■■□□□ 1.19
ARFGAP1-220ENST00000547204 RTL1A6NKG5 1358 aa22.49■■□□□ 1.19
ARFGAP1-220ENST00000547204 GCP02774 474 aa22.48■■□□□ 1.19
ARFGAP1-220ENST00000547204 AMPHP49418 695 aa22.47■■□□□ 1.19
ARFGAP1-220ENST00000547204 CCDC9Q9Y3X0 531 aaKnown RBP22.47■■□□□ 1.19
ARFGAP1-220ENST00000547204 COL14A1Q05707 1796 aaKnown RBP22.45■■□□□ 1.18
ARFGAP1-220ENST00000547204 BTG4Q9NY30 223 aa22.45■■□□□ 1.18
ARFGAP1-220ENST00000547204 U2SURPO15042 1029 aaKnown RBP22.44■■□□□ 1.18
ARFGAP1-220ENST00000547204 U2AF1L5P0DN76 240 aaPredicted RBP22.44■■□□□ 1.18
ARFGAP1-220ENST00000547204 IL13P35225 146 aa22.44■■□□□ 1.18
ARFGAP1-220ENST00000547204 U2AF1Q01081 240 aaKnown RBP eCLIP22.44■■□□□ 1.188e-11■■□□□ 11.7
ARFGAP1-220ENST00000547204 NRAPQ86VF7 1730 aa22.43■■□□□ 1.18
ARFGAP1-220ENST00000547204 HOXC9P31274 260 aa22.43■■□□□ 1.18
ARFGAP1-220ENST00000547204 HSP90AB2PQ58FF8 381 aa22.43■■□□□ 1.18
ARFGAP1-220ENST00000547204 ARHGEF25Q86VW2 580 aa22.42■■□□□ 1.18
ARFGAP1-220ENST00000547204 PRDM11Q9NQV5 511 aa22.42■■□□□ 1.18
ARFGAP1-220ENST00000547204 CENPBP07199 599 aaPredicted RBP22.41■■□□□ 1.18
ARFGAP1-220ENST00000547204 EIF4A2Q14240 407 aaKnown RBP22.41■■□□□ 1.18
ARFGAP1-220ENST00000547204 SEPT12Q8IYM1 358 aa22.4■■□□□ 1.18
ARFGAP1-220ENST00000547204 IP6K1Q92551 441 aa22.4■■□□□ 1.18
ARFGAP1-220ENST00000547204 KIAA0232Q92628 1395 aa22.4■■□□□ 1.18
ARFGAP1-220ENST00000547204 RGPD1P0DJD0 1748 aa22.39■■□□□ 1.17
ARFGAP1-220ENST00000547204 ZBED9Q6R2W3 1325 aa22.39■■□□□ 1.17
ARFGAP1-220ENST00000547204 ZBTB7CA1YPR0 619 aa22.38■■□□□ 1.17
ARFGAP1-220ENST00000547204 CCDC146Q8IYE0 955 aa22.38■■□□□ 1.17
ARFGAP1-220ENST00000547204 ABCC6O95255 1503 aa22.38■■□□□ 1.17
ARFGAP1-220ENST00000547204 CPDO75976 1380 aa22.37■■□□□ 1.17
ARFGAP1-220ENST00000547204 ONECUT3O60422 494 aaPredicted RBP22.36■■□□□ 1.17
ARFGAP1-220ENST00000547204 ZC3H6P61129 1189 aaKnown RBP22.36■■□□□ 1.17
ARFGAP1-220ENST00000547204 RUNDC1Q96C34 613 aa22.36■■□□□ 1.17
ARFGAP1-220ENST00000547204 A0A0G2JS52 829 aa22.35■■□□□ 1.17
ARFGAP1-220ENST00000547204 MYT1Q01538 1121 aa22.35■■□□□ 1.17
ARFGAP1-220ENST00000547204 CHRNA2Q15822 529 aa22.35■■□□□ 1.17
ARFGAP1-220ENST00000547204 PNNQ9H307 717 aaKnown RBP22.35■■□□□ 1.17
ARFGAP1-220ENST00000547204 FCHSD2O94868 740 aa22.34■■□□□ 1.17
ARFGAP1-220ENST00000547204 FAM98CQ17RN3 349 aaKnown RBP22.34■■□□□ 1.17
ARFGAP1-220ENST00000547204 COL18A1P39060 1754 aa22.34■■□□□ 1.17
ARFGAP1-220ENST00000547204 SPATA31A5Q5VU36 1347 aa22.33■■□□□ 1.17
ARFGAP1-220ENST00000547204 SPATA31A7Q8IWB4 1347 aa22.33■■□□□ 1.17
ARFGAP1-220ENST00000547204 BRWD3Q6RI45 1802 aa22.33■■□□□ 1.17
ARFGAP1-220ENST00000547204 CCDC125Q86Z20 511 aa22.32■■□□□ 1.16
ARFGAP1-220ENST00000547204 RSPH6AQ9H0K4 717 aa22.32■■□□□ 1.16
ARFGAP1-220ENST00000547204 SENP3-EIF4A1A0A087X0R7 540 aa22.31■■□□□ 1.16
ARFGAP1-220ENST00000547204 APAF1O14727 1248 aa22.31■■□□□ 1.16
ARFGAP1-220ENST00000547204 KRT27Q7Z3Y8 459 aa22.31■■□□□ 1.16
ARFGAP1-220ENST00000547204 PLEKHF1Q96S99 279 aa22.31■■□□□ 1.16
ARFGAP1-220ENST00000547204 IGSF1Q8N6C5 1336 aa22.31■■□□□ 1.16
ARFGAP1-220ENST00000547204 MAPK8IP3Q9UPT6 1336 aa22.31■■□□□ 1.16
ARFGAP1-220ENST00000547204 HMOX1P09601 288 aa22.31■■□□□ 1.16
ARFGAP1-220ENST00000547204 LTV1Q96GA3 475 aaPredicted RBP22.31■■□□□ 1.16
ARFGAP1-220ENST00000547204 RGPD5Q99666 1765 aa22.3■■□□□ 1.16
ARFGAP1-220ENST00000547204 NGEFQ8N5V2 710 aa22.3■■□□□ 1.16
ARFGAP1-220ENST00000547204 STRN4Q9NRL3 753 aa22.3■■□□□ 1.16
ARFGAP1-220ENST00000547204 PRKAR2BP31323 418 aa22.29■■□□□ 1.16
ARFGAP1-220ENST00000547204 EYA1Q99502 592 aa22.29■■□□□ 1.16
ARFGAP1-220ENST00000547204 NEFMP07197 916 aa22.28■■□□□ 1.16
ARFGAP1-220ENST00000547204 SULT6B1Q6IMI4 303 aa22.28■■□□□ 1.16
ARFGAP1-220ENST00000547204 TCP11L2Q8N4U5 519 aa22.28■■□□□ 1.16
ARFGAP1-220ENST00000547204 AXIN2Q9Y2T1 843 aa22.28■■□□□ 1.16
ARFGAP1-220ENST00000547204 SALL2Q9Y467 1007 aaPredicted RBP22.28■■□□□ 1.16
ARFGAP1-220ENST00000547204 LMO7Q8WWI1 1683 aa22.27■■□□□ 1.16
ARFGAP1-220ENST00000547204 KDRP35968 1356 aa22.27■■□□□ 1.16
ARFGAP1-220ENST00000547204 SPATA31A1Q5TZJ5 1347 aa22.27■■□□□ 1.16
ARFGAP1-220ENST00000547204 AEBP1Q8IUX7 1158 aa22.27■■□□□ 1.16
ARFGAP1-220ENST00000547204 ANKRD24Q8TF21 1146 aa22.27■■□□□ 1.16
ARFGAP1-220ENST00000547204 FAM208AQ9UK61 1670 aaKnown RBP22.26■■□□□ 1.15
ARFGAP1-220ENST00000547204 THSD7AQ9UPZ6 1657 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms