RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 PARP4Q9UKK3 1724 aaKnown RBP21.43■■□□□ 1.02
SSH1-204ENST00000546697 TCP11L2Q8N4U5 519 aa21.43■■□□□ 1.02
SSH1-204ENST00000546697 STRN4Q9NRL3 753 aa21.43■■□□□ 1.02
SSH1-204ENST00000546697 ZRANB1Q9UGI0 708 aa21.43■■□□□ 1.02
SSH1-204ENST00000546697 WDR17Q8IZU2 1322 aa21.43■■□□□ 1.02
SSH1-204ENST00000546697 EVA1CP58658 441 aa21.42■■□□□ 1.02
SSH1-204ENST00000546697 EIF4G2P78344 907 aaKnown RBP eCLIP21.42■■□□□ 1.02
SSH1-204ENST00000546697 LTN1O94822 1766 aa21.39■■□□□ 1.01
SSH1-204ENST00000546697 RGPD5Q99666 1765 aa21.38■■□□□ 1.01
SSH1-204ENST00000546697 WNK3Q9BYP7 1800 aa21.38■■□□□ 1.01
SSH1-204ENST00000546697 DISP2A7MBM2 1401 aa21.38■■□□□ 1.01
SSH1-204ENST00000546697 FYB1O15117 783 aa21.37■■□□□ 1.01
SSH1-204ENST00000546697 CARD10Q9BWT7 1032 aa21.37■■□□□ 1.01
SSH1-204ENST00000546697 ERBB3P21860 1342 aa21.36■■□□□ 1.01
SSH1-204ENST00000546697 HSPA5P11021 654 aaKnown RBP21.36■■□□□ 1.01
SSH1-204ENST00000546697 CDCA7Q9BWT1 371 aaPredicted RBP21.35■■□□□ 1.01
SSH1-204ENST00000546697 CARD14Q9BXL6 1004 aa21.35■■□□□ 1.01
SSH1-204ENST00000546697 CCDC7Q96M83 1385 aa21.35■■□□□ 1.01
SSH1-204ENST00000546697 COG3Q96JB2 828 aa21.34■■□□□ 1.01
SSH1-204ENST00000546697 BCL9O00512 1426 aa21.34■■□□□ 1.01
SSH1-204ENST00000546697 LRRC37A3O60309 1634 aa21.33■■□□□ 1.01
SSH1-204ENST00000546697 PEAK1Q9H792 1746 aa21.33■■□□□ 1.01
SSH1-204ENST00000546697 C11orf95C9JLR9 678 aaPredicted RBP21.33■■□□□ 1.01
SSH1-204ENST00000546697 KIF20BQ96Q89 1820 aa21.33■■□□□ 1.01
SSH1-204ENST00000546697 RGPD1P0DJD0 1748 aa21.32■■□□□ 1
SSH1-204ENST00000546697 IP6K1Q92551 441 aa21.32■■□□□ 1
SSH1-204ENST00000546697 RTL1A6NKG5 1358 aa21.32■■□□□ 1
SSH1-204ENST00000546697 KIF24Q5T7B8 1368 aa21.32■■□□□ 1
SSH1-204ENST00000546697 FAM208AQ9UK61 1670 aaKnown RBP21.31■■□□□ 1
SSH1-204ENST00000546697 FAM196AQ6ZSG2 479 aa21.31■■□□□ 1
SSH1-204ENST00000546697 TOM1L2Q6ZVM7 507 aa21.31■■□□□ 1
SSH1-204ENST00000546697 USP35Q9P2H5 1018 aa21.31■■□□□ 1
SSH1-204ENST00000546697 TNS1Q9HBL0 1735 aaKnown RBP21.31■■□□□ 1
SSH1-204ENST00000546697 A0A0G2JS52 829 aa21.3■■□□□ 1
SSH1-204ENST00000546697 MYT1Q01538 1121 aa21.3■■□□□ 1
SSH1-204ENST00000546697 MAP3K19Q56UN5 1328 aa21.29■■□□□ 1
SSH1-204ENST00000546697 NSD3Q9BZ95 1437 aa21.29■■□□□ 1
SSH1-204ENST00000546697 SOX12O15370 315 aa21.29■■□□□ 1
SSH1-204ENST00000546697 ZBTB7CA1YPR0 619 aa21.27■■□□□ 1
SSH1-204ENST00000546697 PDE3BQ13370 1112 aa21.26■□□□□ 0.99
SSH1-204ENST00000546697 GGNBP2Q9H3C7 697 aa21.26■□□□□ 0.99
SSH1-204ENST00000546697 ANKRD26Q9UPS8 1709 aa21.26■□□□□ 0.99
SSH1-204ENST00000546697 OVOS2A0A0G2JMS6 1433 aa21.25■□□□□ 0.99
SSH1-204ENST00000546697 HOXC9P31274 260 aa21.25■□□□□ 0.99
SSH1-204ENST00000546697 ANKRD24Q8TF21 1146 aa21.25■□□□□ 0.99
SSH1-204ENST00000546697 TNS2Q63HR2 1409 aa21.24■□□□□ 0.99
SSH1-204ENST00000546697 DDB1Q16531 1140 aa21.24■□□□□ 0.99
SSH1-204ENST00000546697 CGNL1Q0VF96 1302 aa21.24■□□□□ 0.99
SSH1-204ENST00000546697 SF3B2Q13435 895 aaKnown RBP21.23■□□□□ 0.99
SSH1-204ENST00000546697 FAM182BQ5T319 152 aa21.23■□□□□ 0.99
SSH1-204ENST00000546697 PARD3Q8TEW0 1356 aa21.23■□□□□ 0.99
SSH1-204ENST00000546697 CSB-PGBD3P0DP91 1061 aa21.22■□□□□ 0.99
SSH1-204ENST00000546697 DEFB132Q7Z7B7 95 aa21.22■□□□□ 0.99
SSH1-204ENST00000546697 INSRP06213 1382 aa21.22■□□□□ 0.99
SSH1-204ENST00000546697 BAG6P46379 1132 aa21.21■□□□□ 0.99
SSH1-204ENST00000546697 NSD2O96028 1365 aa21.21■□□□□ 0.99
SSH1-204ENST00000546697 SBF2Q86WG5 1849 aa21.2■□□□□ 0.98
SSH1-204ENST00000546697 FLT4P35916 1363 aa21.2■□□□□ 0.98
SSH1-204ENST00000546697 RGPD3A6NKT7 1758 aaPredicted RBP21.2■□□□□ 0.98
SSH1-204ENST00000546697 RGPD4Q7Z3J3 1758 aa21.2■□□□□ 0.98
SSH1-204ENST00000546697 FBLN1P23142 703 aa21.19■□□□□ 0.98
SSH1-204ENST00000546697 MARCH10Q8NA82 808 aaPredicted RBP21.19■□□□□ 0.98
SSH1-204ENST00000546697 NCAPD2Q15021 1401 aa21.19■□□□□ 0.98
SSH1-204ENST00000546697 SRCAPQ6ZRS2 3230 aa21.19■□□□□ 0.98
SSH1-204ENST00000546697 IL2RBP14784 551 aa21.17■□□□□ 0.98
SSH1-204ENST00000546697 AMPHP49418 695 aa21.17■□□□□ 0.98
SSH1-204ENST00000546697 RRS1Q15050 365 aaKnown RBP21.17■□□□□ 0.98
SSH1-204ENST00000546697 CAMKK2Q96RR4 588 aa21.17■□□□□ 0.98
SSH1-204ENST00000546697 NLRP2Q9NX02 1062 aa21.17■□□□□ 0.98
SSH1-204ENST00000546697 KIF7Q2M1P5 1343 aa21.17■□□□□ 0.98
SSH1-204ENST00000546697 EXOC5O00471 708 aa21.16■□□□□ 0.98
SSH1-204ENST00000546697 TRIM37O94972 964 aa21.16■□□□□ 0.98
SSH1-204ENST00000546697 PANK3Q9H999 370 aa21.16■□□□□ 0.98
SSH1-204ENST00000546697 RREB1Q92766 1687 aa21.15■□□□□ 0.98
SSH1-204ENST00000546697 SMG6Q86US8 1419 aaKnown RBP21.15■□□□□ 0.98
SSH1-204ENST00000546697 WASHC2AQ641Q2 1341 aa21.14■□□□□ 0.97
SSH1-204ENST00000546697 PLSCR1O15162 318 aa21.12■□□□□ 0.97
SSH1-204ENST00000546697 EN1Q05925 392 aaPredicted RBP21.12■□□□□ 0.97
SSH1-204ENST00000546697 BCL11BQ9C0K0 894 aaPredicted RBP21.12■□□□□ 0.97
SSH1-204ENST00000546697 RGPD2P0DJD1 1756 aa21.12■□□□□ 0.97
SSH1-204ENST00000546697 HSP90AB2PQ58FF8 381 aa21.11■□□□□ 0.97
SSH1-204ENST00000546697 POLKQ9UBT6 870 aa21.11■□□□□ 0.97
SSH1-204ENST00000546697 MAP2P11137 1827 aaKnown RBP21.11■□□□□ 0.97
SSH1-204ENST00000546697 PLEKHG2Q9H7P9 1386 aa21.1■□□□□ 0.97
SSH1-204ENST00000546697 NHSQ6T4R5 1651 aa21.1■□□□□ 0.97
SSH1-204ENST00000546697 PER1O15534 1290 aaPredicted RBP21.1■□□□□ 0.97
SSH1-204ENST00000546697 NBPF6Q5VWK0 638 aa21.1■□□□□ 0.97
SSH1-204ENST00000546697 NBPF4Q96M43 638 aa21.1■□□□□ 0.97
SSH1-204ENST00000546697 EMILIN1Q9Y6C2 1016 aa21.1■□□□□ 0.97
SSH1-204ENST00000546697 SHANK3Q9BYB0 1731 aa21.09■□□□□ 0.97
SSH1-204ENST00000546697 MEGF6O75095 1541 aa21.09■□□□□ 0.97
SSH1-204ENST00000546697 APBA3O96018 575 aa21.09■□□□□ 0.97
SSH1-204ENST00000546697 AMER1Q5JTC6 1135 aaPredicted RBP21.09■□□□□ 0.97
SSH1-204ENST00000546697 NUP188Q5SRE5 1749 aa21.07■□□□□ 0.96
SSH1-204ENST00000546697 EZH2Q15910 746 aaKnown RBP21.07■□□□□ 0.96
SSH1-204ENST00000546697 NPC1L1Q9UHC9 1359 aa21.07■□□□□ 0.96
SSH1-204ENST00000546697 LTV1Q96GA3 475 aaPredicted RBP21.06■□□□□ 0.96
SSH1-204ENST00000546697 POLR3GLQ9BT43 218 aa21.06■□□□□ 0.96
SSH1-204ENST00000546697 KNSTRNQ9Y448 316 aa21.04■□□□□ 0.96
SSH1-204ENST00000546697 PTF1AQ7RTS3 328 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms