RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	NEFM	P07197	916 aa		13.32	□□□□□ -0.28
NPIPA1-208	ENST00000545831	EIF4A2	Q14240	407 aa	Known RBP	13.32	□□□□□ -0.28
NPIPA1-208	ENST00000545831	CPD	O75976	1380 aa		13.31	□□□□□ -0.28
NPIPA1-208	ENST00000545831	FCHSD2	O94868	740 aa		13.3	□□□□□ -0.28
NPIPA1-208	ENST00000545831	RUNDC1	Q96C34	613 aa		13.3	□□□□□ -0.28
NPIPA1-208	ENST00000545831	LTV1	Q96GA3	475 aa	Predicted RBP	13.3	□□□□□ -0.28
NPIPA1-208	ENST00000545831	PRDM11	Q9NQV5	511 aa		13.3	□□□□□ -0.28
NPIPA1-208	ENST00000545831	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.3	□□□□□ -0.28
NPIPA1-208	ENST00000545831	SHPRH	Q149N8	1683 aa		13.3	□□□□□ -0.28
NPIPA1-208	ENST00000545831	PEAK1	Q9H792	1746 aa		13.3	□□□□□ -0.28
NPIPA1-208	ENST00000545831	BLM	P54132	1417 aa	Predicted RBP	13.3	□□□□□ -0.28
NPIPA1-208	ENST00000545831	KIAA0232	Q92628	1395 aa		13.29	□□□□□ -0.28
NPIPA1-208	ENST00000545831	COL16A1	Q07092	1604 aa	Predicted RBP	13.28	□□□□□ -0.28
NPIPA1-208	ENST00000545831	LTN1	O94822	1766 aa		13.28	□□□□□ -0.28
NPIPA1-208	ENST00000545831	CENPB	P07199	599 aa	Predicted RBP	13.28	□□□□□ -0.28
NPIPA1-208	ENST00000545831	CCDC146	Q8IYE0	955 aa		13.28	□□□□□ -0.28
NPIPA1-208	ENST00000545831	HMOX1	P09601	288 aa		13.27	□□□□□ -0.29
NPIPA1-208	ENST00000545831	CHRNA2	Q15822	529 aa		13.27	□□□□□ -0.29
NPIPA1-208	ENST00000545831	NGEF	Q8N5V2	710 aa		13.27	□□□□□ -0.29
NPIPA1-208	ENST00000545831	ANKRD24	Q8TF21	1146 aa		13.27	□□□□□ -0.29
NPIPA1-208	ENST00000545831	EYA1	Q99502	592 aa		13.27	□□□□□ -0.29
NPIPA1-208	ENST00000545831	MAPK8IP3	Q9UPT6	1336 aa		13.27	□□□□□ -0.29
NPIPA1-208	ENST00000545831	JCAD	Q9P266	1359 aa		13.27	□□□□□ -0.29
NPIPA1-208	ENST00000545831	CRYBG1	Q9Y4K1	1723 aa		13.27	□□□□□ -0.29
NPIPA1-208	ENST00000545831	ABCC6	O95255	1503 aa		13.26	□□□□□ -0.29
NPIPA1-208	ENST00000545831	PRKAR2B	P31323	418 aa		13.26	□□□□□ -0.29
NPIPA1-208	ENST00000545831	SULT6B1	Q6IMI4	303 aa		13.26	□□□□□ -0.29
NPIPA1-208	ENST00000545831	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.26	□□□□□ -0.29
NPIPA1-208	ENST00000545831	RSPH6A	Q9H0K4	717 aa		13.26	□□□□□ -0.29
NPIPA1-208	ENST00000545831	AXIN2	Q9Y2T1	843 aa		13.26	□□□□□ -0.29
NPIPA1-208	ENST00000545831	ZBED9	Q6R2W3	1325 aa		13.25	□□□□□ -0.29
NPIPA1-208	ENST00000545831	IGSF1	Q8N6C5	1336 aa		13.25	□□□□□ -0.29
NPIPA1-208	ENST00000545831	APAF1	O14727	1248 aa		13.25	□□□□□ -0.29
NPIPA1-208	ENST00000545831	CSB-PGBD3	P0DP91	1061 aa		13.25	□□□□□ -0.29
NPIPA1-208	ENST00000545831	PLEKHF1	Q96S99	279 aa		13.25	□□□□□ -0.29
NPIPA1-208	ENST00000545831	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.24	□□□□□ -0.29
NPIPA1-208	ENST00000545831	NUTM2E	B1AL46	878 aa	Predicted RBP	13.24	□□□□□ -0.29
NPIPA1-208	ENST00000545831	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.24	□□□□□ -0.29
NPIPA1-208	ENST00000545831	TCP11L2	Q8N4U5	519 aa		13.24	□□□□□ -0.29
NPIPA1-208	ENST00000545831	SALL2	Q9Y467	1007 aa	Predicted RBP	13.24	□□□□□ -0.29
NPIPA1-208	ENST00000545831	ERBB3	P21860	1342 aa		13.23	□□□□□ -0.29
NPIPA1-208	ENST00000545831	ABCA3	Q99758	1704 aa		13.23	□□□□□ -0.29
NPIPA1-208	ENST00000545831	FAM83G	A6ND36	823 aa		13.23	□□□□□ -0.29
NPIPA1-208	ENST00000545831	HSPA1L	P34931	641 aa		13.23	□□□□□ -0.29
NPIPA1-208	ENST00000545831	EVA1C	P58658	441 aa		13.23	□□□□□ -0.29
NPIPA1-208	ENST00000545831	SPATA31A6	Q5VVP1	1343 aa		13.22	□□□□□ -0.29
NPIPA1-208	ENST00000545831	SENP3-EIF4A1	A0A087X0R7	540 aa		13.22	□□□□□ -0.29
NPIPA1-208	ENST00000545831	NCBP3	Q53F19	620 aa	Known RBP	13.22	□□□□□ -0.29
NPIPA1-208	ENST00000545831	NBPF6	Q5VWK0	638 aa		13.22	□□□□□ -0.29
NPIPA1-208	ENST00000545831	NBPF4	Q96M43	638 aa		13.22	□□□□□ -0.29
NPIPA1-208	ENST00000545831	NLRP2	Q9NX02	1062 aa		13.22	□□□□□ -0.29
NPIPA1-208	ENST00000545831	ADAMTS2	O95450	1211 aa		13.21	□□□□□ -0.29
NPIPA1-208	ENST00000545831	AEBP1	Q8IUX7	1158 aa		13.21	□□□□□ -0.29
NPIPA1-208	ENST00000545831	COL18A1	P39060	1754 aa		13.21	□□□□□ -0.29
NPIPA1-208	ENST00000545831	KDR	P35968	1356 aa		13.2	□□□□□ -0.3
NPIPA1-208	ENST00000545831	RGPD1	P0DJD0	1748 aa		13.2	□□□□□ -0.3
NPIPA1-208	ENST00000545831	TMPO	P42166	694 aa	Known RBP	13.2	□□□□□ -0.3
NPIPA1-208	ENST00000545831	PDE3B	Q13370	1112 aa		13.2	□□□□□ -0.3
NPIPA1-208	ENST00000545831	NEUROD2	Q15784	382 aa		13.2	□□□□□ -0.3
NPIPA1-208	ENST00000545831	USHBP1	Q8N6Y0	703 aa		13.2	□□□□□ -0.3
NPIPA1-208	ENST00000545831	WDR17	Q8IZU2	1322 aa		13.19	□□□□□ -0.3
NPIPA1-208	ENST00000545831	NFE2L2	Q16236	605 aa		13.19	□□□□□ -0.3
NPIPA1-208	ENST00000545831	TOM1L2	Q6ZVM7	507 aa		13.19	□□□□□ -0.3
NPIPA1-208	ENST00000545831	PHACTR3	Q96KR7	559 aa		13.19	□□□□□ -0.3
NPIPA1-208	ENST00000545831	STRN4	Q9NRL3	753 aa		13.19	□□□□□ -0.3
NPIPA1-208	ENST00000545831	BTG4	Q9NY30	223 aa		13.19	□□□□□ -0.3
NPIPA1-208	ENST00000545831	RRP7A	Q9Y3A4	280 aa	Known RBP	13.19	□□□□□ -0.3
NPIPA1-208	ENST00000545831	CAMTA1	Q9Y6Y1	1673 aa		13.18	□□□□□ -0.3
NPIPA1-208	ENST00000545831	COL14A1	Q05707	1796 aa	Known RBP	13.18	□□□□□ -0.3
NPIPA1-208	ENST00000545831	RIPK4	P57078	832 aa		13.18	□□□□□ -0.3
NPIPA1-208	ENST00000545831	LMOD3	Q0VAK6	560 aa		13.18	□□□□□ -0.3
NPIPA1-208	ENST00000545831	CCDC27	Q2M243	656 aa		13.18	□□□□□ -0.3
NPIPA1-208	ENST00000545831	GAS2L2	Q8NHY3	880 aa		13.18	□□□□□ -0.3
NPIPA1-208	ENST00000545831	RGPD5	Q99666	1765 aa		13.17	□□□□□ -0.3
NPIPA1-208	ENST00000545831	COL5A2	P05997	1499 aa	Predicted RBP	13.17	□□□□□ -0.3
NPIPA1-208	ENST00000545831	RAPGEF4	Q8WZA2	1011 aa		13.17	□□□□□ -0.3
NPIPA1-208	ENST00000545831	LMO7	Q8WWI1	1683 aa		13.17	□□□□□ -0.3
NPIPA1-208	ENST00000545831	NCAPD2	Q15021	1401 aa		13.16	□□□□□ -0.3
NPIPA1-208	ENST00000545831	FAM208A	Q9UK61	1670 aa	Known RBP	13.16	□□□□□ -0.3
NPIPA1-208	ENST00000545831	TAT	P17735	454 aa	Predicted RBP	13.16	□□□□□ -0.3
NPIPA1-208	ENST00000545831	AMOT	Q4VCS5	1084 aa		13.16	□□□□□ -0.3
NPIPA1-208	ENST00000545831	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.16	□□□□□ -0.3
NPIPA1-208	ENST00000545831	WWC1	Q8IX03	1113 aa		13.16	□□□□□ -0.3
NPIPA1-208	ENST00000545831	CARD10	Q9BWT7	1032 aa		13.16	□□□□□ -0.3
NPIPA1-208	ENST00000545831	GOLGA2	Q08379	1002 aa		13.15	□□□□□ -0.3
NPIPA1-208	ENST00000545831	MEX3C	Q5U5Q3	659 aa	Known RBP	13.15	□□□□□ -0.3
NPIPA1-208	ENST00000545831	LARP1	Q6PKG0	1096 aa	Known RBP	13.15	□□□□□ -0.3
NPIPA1-208	ENST00000545831	WDR63	Q8IWG1	891 aa		13.15	□□□□□ -0.3
NPIPA1-208	ENST00000545831	NGLY1	Q96IV0	654 aa		13.15	□□□□□ -0.3
NPIPA1-208	ENST00000545831	CALD1	Q05682	793 aa	Known RBP	13.14	□□□□□ -0.31
NPIPA1-208	ENST00000545831	MTHFSD	Q2M296	383 aa	Known RBP	13.14	□□□□□ -0.31
NPIPA1-208	ENST00000545831	C8orf37	Q96NL8	207 aa		13.14	□□□□□ -0.31
NPIPA1-208	ENST00000545831	ZNF521	Q96K83	1311 aa		13.13	□□□□□ -0.31
NPIPA1-208	ENST00000545831	CRB1	P82279	1406 aa		13.13	□□□□□ -0.31
NPIPA1-208	ENST00000545831	PLEKHG2	Q9H7P9	1386 aa		13.13	□□□□□ -0.31
NPIPA1-208	ENST00000545831	FBXO41	Q8TF61	875 aa		13.13	□□□□□ -0.31
NPIPA1-208	ENST00000545831	RTF1	Q92541	710 aa	Known RBP	13.13	□□□□□ -0.31
NPIPA1-208	ENST00000545831	TRIM35	Q9UPQ4	493 aa		13.13	□□□□□ -0.31
NPIPA1-208	ENST00000545831	SPG7	Q9UQ90	795 aa		13.13	□□□□□ -0.31
NPIPA1-208	ENST00000545831	RGPD2	P0DJD1	1756 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms