RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 NEK4P51957 841 aa20.59■□□□□ 0.89
ARHGEF28-214ENST00000545377 NGLY1Q96IV0 654 aa20.59■□□□□ 0.89
ARHGEF28-214ENST00000545377 UBAC1Q9BSL1 405 aa20.59■□□□□ 0.89
ARHGEF28-214ENST00000545377 DEF6Q9H4E7 631 aa20.59■□□□□ 0.89
ARHGEF28-214ENST00000545377 ARGLU1Q9NWB6 273 aaPredicted RBP20.59■□□□□ 0.89
ARHGEF28-214ENST00000545377 CNTLNQ9NXG0 1405 aa20.59■□□□□ 0.89
ARHGEF28-214ENST00000545377 RAD54L2Q9Y4B4 1467 aa20.59■□□□□ 0.89
ARHGEF28-214ENST00000545377 STARD3NLO95772 234 aa20.58■□□□□ 0.89
ARHGEF28-214ENST00000545377 RRS1Q15050 365 aaKnown RBP20.58■□□□□ 0.89
ARHGEF28-214ENST00000545377 IDH1O75874 414 aaKnown RBP20.58■□□□□ 0.88
ARHGEF28-214ENST00000545377 TRIM5Q9C035 493 aa20.57■□□□□ 0.88
ARHGEF28-214ENST00000545377 AACSQ86V21 672 aa20.57■□□□□ 0.88
ARHGEF28-214ENST00000545377 TSR2Q969E8 191 aaKnown RBP20.57■□□□□ 0.88
ARHGEF28-214ENST00000545377 SRCIN1Q9C0H9 1055 aa20.57■□□□□ 0.88
ARHGEF28-214ENST00000545377 NOB1Q9ULX3 412 aaKnown RBP20.57■□□□□ 0.88
ARHGEF28-214ENST00000545377 ADAMTS8Q9UP79 889 aa20.57■□□□□ 0.88
ARHGEF28-214ENST00000545377 SEPT7Q16181 437 aaKnown RBP20.57■□□□□ 0.88
ARHGEF28-214ENST00000545377 STIM1Q13586 685 aa20.56■□□□□ 0.88
ARHGEF28-214ENST00000545377 HSP90AA2PQ14568 343 aaPredicted RBP20.56■□□□□ 0.88
ARHGEF28-214ENST00000545377 TSHZ2Q9NRE2 1034 aa20.56■□□□□ 0.88
ARHGEF28-214ENST00000545377 ZNHIT6Q9NWK9 470 aaKnown RBP20.56■□□□□ 0.88
ARHGEF28-214ENST00000545377 POLR3DP05423 398 aaPredicted RBP20.56■□□□□ 0.88
ARHGEF28-214ENST00000545377 SSR1P43307 286 aaKnown RBP20.56■□□□□ 0.88
ARHGEF28-214ENST00000545377 ZNF692Q9BU19 519 aaPredicted RBP20.56■□□□□ 0.88
ARHGEF28-214ENST00000545377 TMOD3Q9NYL9 352 aa20.56■□□□□ 0.88
ARHGEF28-214ENST00000545377 CEP126Q9P2H0 1117 aa20.56■□□□□ 0.88
ARHGEF28-214ENST00000545377 ZNF652Q9Y2D9 606 aa20.56■□□□□ 0.88
ARHGEF28-214ENST00000545377 GSE1Q14687 1217 aa20.55■□□□□ 0.88
ARHGEF28-214ENST00000545377 FYCO1Q9BQS8 1478 aa20.55■□□□□ 0.88
ARHGEF28-214ENST00000545377 RAPGEF3O95398 923 aa20.55■□□□□ 0.88
ARHGEF28-214ENST00000545377 RRBP1Q9P2E9 1410 aaKnown RBP20.55■□□□□ 0.88
ARHGEF28-214ENST00000545377 DESP17661 470 aa20.55■□□□□ 0.88
ARHGEF28-214ENST00000545377 MAP7D2Q96T17 732 aa20.55■□□□□ 0.88
ARHGEF28-214ENST00000545377 NOL7Q9UMY1 257 aaKnown RBP20.55■□□□□ 0.88
ARHGEF28-214ENST00000545377 FIBPO43427 364 aa20.54■□□□□ 0.88
ARHGEF28-214ENST00000545377 TRIM21P19474 475 aaKnown RBP20.54■□□□□ 0.88
ARHGEF28-214ENST00000545377 RTEL1-TNFRSF6BF6WH68 1400 aa20.54■□□□□ 0.88
ARHGEF28-214ENST00000545377 BMP2KQ9NSY1 1161 aaPredicted RBP20.54■□□□□ 0.88
ARHGEF28-214ENST00000545377 WDR70Q9NW82 654 aa20.54■□□□□ 0.88
ARHGEF28-214ENST00000545377 PIP4K2AP48426 406 aaPredicted RBP20.53■□□□□ 0.88
ARHGEF28-214ENST00000545377 DCTN1Q14203 1278 aa20.53■□□□□ 0.88
ARHGEF28-214ENST00000545377 NOM1Q5C9Z4 860 aaKnown RBP20.53■□□□□ 0.88
ARHGEF28-214ENST00000545377 SERPINC1P01008 464 aa20.53■□□□□ 0.88
ARHGEF28-214ENST00000545377 FAM13BQ9NYF5 915 aa20.53■□□□□ 0.88
ARHGEF28-214ENST00000545377 METTL24Q5JXM2 366 aa20.53■□□□□ 0.88
ARHGEF28-214ENST00000545377 LRRCC1Q9C099 1032 aa20.53■□□□□ 0.88
ARHGEF28-214ENST00000545377 SLC12A5Q9H2X9 1139 aa20.53■□□□□ 0.88
ARHGEF28-214ENST00000545377 CYP46A1Q9Y6A2 500 aa20.52■□□□□ 0.88
ARHGEF28-214ENST00000545377 POGZQ7Z3K3 1410 aa20.52■□□□□ 0.88
ARHGEF28-214ENST00000545377 MPRIPQ6WCQ1 1025 aa20.52■□□□□ 0.88
ARHGEF28-214ENST00000545377 RPGRQ92834 1020 aaKnown RBP20.52■□□□□ 0.88
ARHGEF28-214ENST00000545377 STAC3Q96MF2 364 aa20.52■□□□□ 0.88
ARHGEF28-214ENST00000545377 ZRSR2Q15696 482 aaKnown RBP20.52■□□□□ 0.88
ARHGEF28-214ENST00000545377 ANKRD50Q9ULJ7 1429 aa20.52■□□□□ 0.88
ARHGEF28-214ENST00000545377 JMYQ8N9B5 988 aa20.52■□□□□ 0.87
ARHGEF28-214ENST00000545377 ATAD2BQ9ULI0 1458 aa20.51■□□□□ 0.87
ARHGEF28-214ENST00000545377 ME1P48163 572 aa20.51■□□□□ 0.87
ARHGEF28-214ENST00000545377 CCT4P50991 539 aaKnown RBP20.51■□□□□ 0.87
ARHGEF28-214ENST00000545377 ERLIN2O94905 339 aa20.51■□□□□ 0.87
ARHGEF28-214ENST00000545377 TNIP1Q15025 636 aa20.51■□□□□ 0.87
ARHGEF28-214ENST00000545377 AIDAQ96BJ3 306 aa20.51■□□□□ 0.87
ARHGEF28-214ENST00000545377 PDCP20941 246 aa20.5■□□□□ 0.87
ARHGEF28-214ENST00000545377 HMGB2P26583 209 aaKnown RBP20.5■□□□□ 0.87
ARHGEF28-214ENST00000545377 CA8P35219 290 aa20.5■□□□□ 0.87
ARHGEF28-214ENST00000545377 CAVIN4Q5BKX8 364 aa20.5■□□□□ 0.87
ARHGEF28-214ENST00000545377 CCDC181Q5TID7 509 aa20.5■□□□□ 0.87
ARHGEF28-214ENST00000545377 PPP4R3AQ6IN85 833 aa20.49■□□□□ 0.87
ARHGEF28-214ENST00000545377 KIF7Q2M1P5 1343 aa20.49■□□□□ 0.87
ARHGEF28-214ENST00000545377 SRGAP3O43295 1099 aa20.49■□□□□ 0.87
ARHGEF28-214ENST00000545377 ENOX2Q16206 610 aaKnown RBP20.49■□□□□ 0.87
ARHGEF28-214ENST00000545377 ANKRD18AQ8IVF6 992 aa20.49■□□□□ 0.87
ARHGEF28-214ENST00000545377 MKNK2Q9HBH9 465 aa20.49■□□□□ 0.87
ARHGEF28-214ENST00000545377 FGD5Q6ZNL6 1462 aa20.49■□□□□ 0.87
ARHGEF28-214ENST00000545377 MINDY4BA8MYZ0 360 aa20.48■□□□□ 0.87
ARHGEF28-214ENST00000545377 PRG4Q92954 1404 aaPredicted RBP20.48■□□□□ 0.87
ARHGEF28-214ENST00000545377 SCAPERQ9BY12 1400 aa20.48■□□□□ 0.87
ARHGEF28-214ENST00000545377 BCAR3O75815 825 aa20.48■□□□□ 0.87
ARHGEF28-214ENST00000545377 DZIP1Q86YF9 867 aaKnown RBP20.48■□□□□ 0.87
ARHGEF28-214ENST00000545377 PPFIBP1Q86W92 1011 aa20.48■□□□□ 0.87
ARHGEF28-214ENST00000545377 SEC63Q9UGP8 760 aaKnown RBP20.48■□□□□ 0.87
ARHGEF28-214ENST00000545377 LIG1P18858 919 aa20.47■□□□□ 0.87
ARHGEF28-214ENST00000545377 ERCC4Q92889 916 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF28-214ENST00000545377 CCDC96Q2M329 555 aa20.47■□□□□ 0.87
ARHGEF28-214ENST00000545377 CAVIN1Q6NZI2 390 aaKnown RBP20.46■□□□□ 0.87
ARHGEF28-214ENST00000545377 CCDC191Q8NCU4 936 aa20.46■□□□□ 0.87
ARHGEF28-214ENST00000545377 LUC7LQ9NQ29 371 aaKnown RBP20.46■□□□□ 0.87
ARHGEF28-214ENST00000545377 PRPF40AO75400 957 aaKnown RBP20.46■□□□□ 0.87
ARHGEF28-214ENST00000545377 PPP2R1AP30153 589 aa20.46■□□□□ 0.87
ARHGEF28-214ENST00000545377 MIS18AQ9NYP9 233 aa20.46■□□□□ 0.87
ARHGEF28-214ENST00000545377 SPC24Q8NBT2 197 aa20.46■□□□□ 0.87
ARHGEF28-214ENST00000545377 AXDND1Q5T1B0 1012 aaPredicted RBP20.45■□□□□ 0.86
ARHGEF28-214ENST00000545377 TRMT1LQ7Z2T5 733 aaKnown RBP20.45■□□□□ 0.86
ARHGEF28-214ENST00000545377 CWC27Q6UX04 472 aaKnown RBP20.45■□□□□ 0.86
ARHGEF28-214ENST00000545377 ZNF622Q969S3 477 aaKnown RBP eCLIP20.45■□□□□ 0.86
ARHGEF28-214ENST00000545377 H0YHG0 523 aa20.45■□□□□ 0.86
ARHGEF28-214ENST00000545377 PLCD3Q8N3E9 789 aa20.45■□□□□ 0.86
ARHGEF28-214ENST00000545377 USHBP1Q8N6Y0 703 aa20.45■□□□□ 0.86
ARHGEF28-214ENST00000545377 IL1RAPL2Q9NP60 686 aa20.45■□□□□ 0.86
ARHGEF28-214ENST00000545377 DACH1Q9UI36 760 aa20.44■□□□□ 0.86
ARHGEF28-214ENST00000545377 C6orf229H3BNL8 230 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms