RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-222	ENST00000545308	MEIOB	Q8N635	442 aa		7.9	□□□□□ -1.14
SNHG1-222	ENST00000545308	MAGEB6P1	A0A0J9YX57	407 aa		7.89	□□□□□ -1.15
SNHG1-222	ENST00000545308	UPP2	O95045	317 aa		7.89	□□□□□ -1.15
SNHG1-222	ENST00000545308	VSIG8	P0DPA2	414 aa		7.89	□□□□□ -1.15
SNHG1-222	ENST00000545308	BMP2	P12643	396 aa		7.89	□□□□□ -1.15
SNHG1-222	ENST00000545308	CTDSPL2	Q05D32	466 aa		7.89	□□□□□ -1.15
SNHG1-222	ENST00000545308	EMILIN1	Q9Y6C2	1016 aa		7.88	□□□□□ -1.15
SNHG1-222	ENST00000545308	SOS2	Q07890	1332 aa	Predicted RBP	7.87	□□□□□ -1.15
SNHG1-222	ENST00000545308	CCDC116	Q8IYX3	515 aa		7.87	□□□□□ -1.15
SNHG1-222	ENST00000545308	CARD14	Q9BXL6	1004 aa		7.87	□□□□□ -1.15
SNHG1-222	ENST00000545308	PPFIA3	O75145	1194 aa		7.86	□□□□□ -1.15
SNHG1-222	ENST00000545308	ERFE	Q4G0M1	354 aa		7.86	□□□□□ -1.15
SNHG1-222	ENST00000545308	PDXDC2P	Q6P474	469 aa		7.86	□□□□□ -1.15
SNHG1-222	ENST00000545308	TSEN34	Q9BSV6	310 aa	Known RBP	7.86	□□□□□ -1.15
SNHG1-222	ENST00000545308	ZMYND15	Q9H091	742 aa		7.86	□□□□□ -1.15
SNHG1-222	ENST00000545308	SKIV2L	Q15477	1246 aa	Known RBP	7.84	□□□□□ -1.15
SNHG1-222	ENST00000545308	LRRN4	Q8WUT4	740 aa		7.84	□□□□□ -1.15
SNHG1-222	ENST00000545308	DDRGK1	Q96HY6	314 aa		7.84	□□□□□ -1.15
SNHG1-222	ENST00000545308	ARHGAP9	Q9BRR9	750 aa		7.84	□□□□□ -1.15
SNHG1-222	ENST00000545308	FKBPL	Q9UIM3	349 aa		7.84	□□□□□ -1.15
SNHG1-222	ENST00000545308	DNMT3L	Q9UJW3	386 aa		7.84	□□□□□ -1.15
SNHG1-222	ENST00000545308	FBXO31	Q5XUX0	539 aa	Predicted RBP	7.83	□□□□□ -1.16
SNHG1-222	ENST00000545308	SH3D19	Q5HYK7	790 aa		7.82	□□□□□ -1.16
SNHG1-222	ENST00000545308	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	7.82	□□□□□ -1.16
SNHG1-222	ENST00000545308		Q6ZVU0	165 aa		7.82	□□□□□ -1.16
SNHG1-222	ENST00000545308	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	7.82	□□□□□ -1.16
SNHG1-222	ENST00000545308	PGPEP1	Q9NXJ5	209 aa		7.82	□□□□□ -1.16
SNHG1-222	ENST00000545308	CDV3	Q9UKY7	258 aa	Known RBP	7.82	□□□□□ -1.16
SNHG1-222	ENST00000545308	ZC3H4	Q9UPT8	1303 aa	Known RBP	7.81	□□□□□ -1.16
SNHG1-222	ENST00000545308	TTLL8	A6PVC2	850 aa		7.81	□□□□□ -1.16
SNHG1-222	ENST00000545308	NR6A1	Q15406	480 aa		7.81	□□□□□ -1.16
SNHG1-222	ENST00000545308	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	7.81	□□□□□ -1.16
SNHG1-222	ENST00000545308	PPP2R2D	Q66LE6	453 aa		7.81	□□□□□ -1.16
SNHG1-222	ENST00000545308	PROCA1	Q8NCQ7	364 aa	Predicted RBP	7.81	□□□□□ -1.16
SNHG1-222	ENST00000545308	SLC10A4	Q96EP9	437 aa		7.81	□□□□□ -1.16
SNHG1-222	ENST00000545308	KCTD15	Q96SI1	283 aa	Predicted RBP	7.81	□□□□□ -1.16
SNHG1-222	ENST00000545308	CBLB	Q13191	982 aa		7.8	□□□□□ -1.16
SNHG1-222	ENST00000545308	SPINT1	O43278	529 aa		7.79	□□□□□ -1.16
SNHG1-222	ENST00000545308	ZBTB33	Q86T24	672 aa		7.79	□□□□□ -1.16
SNHG1-222	ENST00000545308	OCSTAMP	Q9BR26	566 aa		7.79	□□□□□ -1.16
SNHG1-222	ENST00000545308	PTS	Q03393	145 aa		7.78	□□□□□ -1.16
SNHG1-222	ENST00000545308	PTK2	Q05397	1052 aa		7.78	□□□□□ -1.16
SNHG1-222	ENST00000545308	DHX9	Q08211	1270 aa	Known RBP	7.78	□□□□□ -1.16
SNHG1-222	ENST00000545308	GPSM3	Q9Y4H4	160 aa		7.78	□□□□□ -1.16
SNHG1-222	ENST00000545308	FIGNL2	A6NMB9	653 aa		7.77	□□□□□ -1.17
SNHG1-222	ENST00000545308	INTS6L	Q5JSJ4	861 aa	Known RBP	7.77	□□□□□ -1.17
SNHG1-222	ENST00000545308	ATP1B4	Q9UN42	357 aa	Predicted RBP	7.77	□□□□□ -1.17
SNHG1-222	ENST00000545308	AP1G2	O75843	785 aa		7.76	□□□□□ -1.17
SNHG1-222	ENST00000545308	GPR161	Q8N6U8	529 aa	Known RBP	7.76	□□□□□ -1.17
SNHG1-222	ENST00000545308	GOPC	Q9HD26	462 aa		7.76	□□□□□ -1.17
SNHG1-222	ENST00000545308	UBTF	P17480	764 aa	Known RBP	7.75	□□□□□ -1.17
SNHG1-222	ENST00000545308	ADAM32	Q8TC27	787 aa		7.75	□□□□□ -1.17
SNHG1-222	ENST00000545308	C1orf115	Q9H7X2	142 aa		7.75	□□□□□ -1.17
SNHG1-222	ENST00000545308	KRT76	Q01546	638 aa		7.74	□□□□□ -1.17
SNHG1-222	ENST00000545308	CCDC155	Q8N6L0	562 aa		7.74	□□□□□ -1.17
SNHG1-222	ENST00000545308	EPS8L1	Q8TE68	723 aa		7.74	□□□□□ -1.17
SNHG1-222	ENST00000545308	NANOS1	Q8WY41	292 aa	Known RBP	7.74	□□□□□ -1.17
SNHG1-222	ENST00000545308	AGBL1	Q96MI9	1066 aa		7.74	□□□□□ -1.17
SNHG1-222	ENST00000545308	SLC35F4	A4IF30	521 aa		7.73	□□□□□ -1.17
SNHG1-222	ENST00000545308	NBPF20	Q3BBV1	942 aa		7.73	□□□□□ -1.17
SNHG1-222	ENST00000545308	PNMA1	Q8ND90	353 aa		7.73	□□□□□ -1.17
SNHG1-222	ENST00000545308	CNTNAP3B	Q96NU0	1288 aa		7.73	□□□□□ -1.17
SNHG1-222	ENST00000545308	CNTNAP3	Q9BZ76	1288 aa		7.73	□□□□□ -1.17
SNHG1-222	ENST00000545308	CTSO	P43234	321 aa	Predicted RBP	7.72	□□□□□ -1.17
SNHG1-222	ENST00000545308	RELB	Q01201	579 aa		7.72	□□□□□ -1.17
SNHG1-222	ENST00000545308	HMX1	Q9NP08	348 aa	Predicted RBP	7.72	□□□□□ -1.17
SNHG1-222	ENST00000545308	USP17L8	P0C7I0	530 aa		7.71	□□□□□ -1.18
SNHG1-222	ENST00000545308	FLII	Q13045	1269 aa		7.71	□□□□□ -1.18
SNHG1-222	ENST00000545308	INSM2	Q96T92	566 aa	Predicted RBP	7.71	□□□□□ -1.18
SNHG1-222	ENST00000545308	TMPRSS4	Q9NRS4	437 aa		7.71	□□□□□ -1.18
SNHG1-222	ENST00000545308	DZIP3	Q86Y13	1208 aa	Known RBP	7.7	□□□□□ -1.18
SNHG1-222	ENST00000545308	ZNF784	Q8NCA9	323 aa	Predicted RBP	7.7	□□□□□ -1.18
SNHG1-222	ENST00000545308	COL25A1	Q9BXS0	654 aa	Predicted RBP	7.7	□□□□□ -1.18
SNHG1-222	ENST00000545308	POLM	Q9NP87	494 aa	Predicted RBP	7.7	□□□□□ -1.18
SNHG1-222	ENST00000545308	LILRA1	O75019	489 aa		7.69	□□□□□ -1.18
SNHG1-222	ENST00000545308	ITGA6	P23229	1130 aa		7.69	□□□□□ -1.18
SNHG1-222	ENST00000545308	RFC5	P40937	340 aa		7.69	□□□□□ -1.18
SNHG1-222	ENST00000545308	KCNMA1	Q12791	1236 aa		7.69	□□□□□ -1.18
SNHG1-222	ENST00000545308	RNF217	Q8TC41	542 aa		7.69	□□□□□ -1.18
SNHG1-222	ENST00000545308	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.69	□□□□□ -1.18
SNHG1-222	ENST00000545308	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.69	□□□□□ -1.18
SNHG1-222	ENST00000545308	ARID3C	A6NKF2	412 aa		7.68	□□□□□ -1.18
SNHG1-222	ENST00000545308	ESPN	B1AK53	854 aa		7.68	□□□□□ -1.18
SNHG1-222	ENST00000545308	ERVH48-1	M5A8F1	160 aa		7.68	□□□□□ -1.18
SNHG1-222	ENST00000545308	ADH1A	P07327	375 aa		7.68	□□□□□ -1.18
SNHG1-222	ENST00000545308	ADD1	P35611	737 aa	Known RBP	7.68	□□□□□ -1.18
SNHG1-222	ENST00000545308	RAB15	P59190	212 aa		7.68	□□□□□ -1.18
SNHG1-222	ENST00000545308	GSK3A	P49840	483 aa		7.67	□□□□□ -1.18
SNHG1-222	ENST00000545308	RNFT1	Q5M7Z0	435 aa		7.67	□□□□□ -1.18
SNHG1-222	ENST00000545308	VWA5B2	Q8N398	1253 aa		7.67	□□□□□ -1.18
SNHG1-222	ENST00000545308	KDF1	Q8NAX2	398 aa	Predicted RBP	7.67	□□□□□ -1.18
SNHG1-222	ENST00000545308	ARID3A	Q99856	593 aa		7.67	□□□□□ -1.18
SNHG1-222	ENST00000545308	SENP3-EIF4A1	A0A087X0R7	540 aa		7.66	□□□□□ -1.18
SNHG1-222	ENST00000545308	PTGIR	P43119	386 aa		7.66	□□□□□ -1.18
SNHG1-222	ENST00000545308	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.66	□□□□□ -1.18
SNHG1-222	ENST00000545308	SV2A	Q7L0J3	742 aa		7.66	□□□□□ -1.18
SNHG1-222	ENST00000545308	CLUAP1	Q96AJ1	413 aa		7.66	□□□□□ -1.18
SNHG1-222	ENST00000545308	TRIM34	Q9BYJ4	488 aa		7.66	□□□□□ -1.18
SNHG1-222	ENST00000545308	ADAMTS8	Q9UP79	889 aa		7.66	□□□□□ -1.18
SNHG1-222	ENST00000545308	CDC14C	A4D256	554 aa		7.65	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms