RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 LMO7Q8WWI1 1683 aa18.79■□□□□ 0.6
LTBR-213ENST00000544454 SPATA31A1Q5TZJ5 1347 aa18.79■□□□□ 0.6
LTBR-213ENST00000544454 PER1O15534 1290 aaPredicted RBP18.79■□□□□ 0.6
LTBR-213ENST00000544454 IP6K1Q92551 441 aa18.79■□□□□ 0.6
LTBR-213ENST00000544454 COL5A2P05997 1499 aaPredicted RBP18.78■□□□□ 0.6
LTBR-213ENST00000544454 MAP3K19Q56UN5 1328 aa18.78■□□□□ 0.6
LTBR-213ENST00000544454 SOCS7O14512 581 aa18.78■□□□□ 0.6
LTBR-213ENST00000544454 FBLN1P23142 703 aa18.78■□□□□ 0.6
LTBR-213ENST00000544454 NSD2O96028 1365 aa18.78■□□□□ 0.6
LTBR-213ENST00000544454 NRAPQ86VF7 1730 aa18.77■□□□□ 0.6
LTBR-213ENST00000544454 AMPHP49418 695 aa18.77■□□□□ 0.6
LTBR-213ENST00000544454 ABCC6O95255 1503 aa18.77■□□□□ 0.6
LTBR-213ENST00000544454 WDR17Q8IZU2 1322 aa18.76■□□□□ 0.59
LTBR-213ENST00000544454 RGS12O14924 1447 aa18.76■□□□□ 0.59
LTBR-213ENST00000544454 FAM98CQ17RN3 349 aaKnown RBP18.76■□□□□ 0.59
LTBR-213ENST00000544454 AMER1Q5JTC6 1135 aaPredicted RBP18.76■□□□□ 0.59
LTBR-213ENST00000544454 THRAP3Q9Y2W1 955 aaKnown RBP18.76■□□□□ 0.59
LTBR-213ENST00000544454 GLI3P10071 1580 aa18.76■□□□□ 0.59
LTBR-213ENST00000544454 COL18A1P39060 1754 aa18.76■□□□□ 0.59
LTBR-213ENST00000544454 CSB-PGBD3P0DP91 1061 aa18.75■□□□□ 0.59
LTBR-213ENST00000544454 RRS1Q15050 365 aaKnown RBP18.75■□□□□ 0.59
LTBR-213ENST00000544454 BARGINQ6ZT62 677 aa18.75■□□□□ 0.59
LTBR-213ENST00000544454 TOM1L2Q6ZVM7 507 aa18.75■□□□□ 0.59
LTBR-213ENST00000544454 SEPT12Q8IYM1 358 aa18.75■□□□□ 0.59
LTBR-213ENST00000544454 TCP11L2Q8N4U5 519 aa18.75■□□□□ 0.59
LTBR-213ENST00000544454 CRB1P82279 1406 aa18.74■□□□□ 0.59
LTBR-213ENST00000544454 HOXC9P31274 260 aa18.74■□□□□ 0.59
LTBR-213ENST00000544454 USP35Q9P2H5 1018 aa18.74■□□□□ 0.59
LTBR-213ENST00000544454 BLMP54132 1417 aaPredicted RBP18.74■□□□□ 0.59
LTBR-213ENST00000544454 KIF24Q5T7B8 1368 aa18.73■□□□□ 0.59
LTBR-213ENST00000544454 MORC1Q86VD1 984 aa18.73■□□□□ 0.59
LTBR-213ENST00000544454 CARD10Q9BWT7 1032 aa18.73■□□□□ 0.59
LTBR-213ENST00000544454 ERBB3P21860 1342 aa18.73■□□□□ 0.59
LTBR-213ENST00000544454 ANKRD24Q8TF21 1146 aa18.72■□□□□ 0.59
LTBR-213ENST00000544454 KIF20BQ96Q89 1820 aa18.72■□□□□ 0.59
LTBR-213ENST00000544454 RTL1A6NKG5 1358 aa18.71■□□□□ 0.59
LTBR-213ENST00000544454 A0A0G2JS52 829 aa18.7■□□□□ 0.58
LTBR-213ENST00000544454 MYT1Q01538 1121 aa18.7■□□□□ 0.58
LTBR-213ENST00000544454 POLKQ9UBT6 870 aa18.7■□□□□ 0.58
LTBR-213ENST00000544454 NPC1L1Q9UHC9 1359 aa18.69■□□□□ 0.58
LTBR-213ENST00000544454 TNNT2P45379 298 aaPredicted RBP18.69■□□□□ 0.58
LTBR-213ENST00000544454 NLRP2Q9NX02 1062 aa18.69■□□□□ 0.58
LTBR-213ENST00000544454 FLT4P35916 1363 aa18.68■□□□□ 0.58
LTBR-213ENST00000544454 HSP90AB2PQ58FF8 381 aa18.68■□□□□ 0.58
LTBR-213ENST00000544454 EMILIN1Q9Y6C2 1016 aa18.68■□□□□ 0.58
LTBR-213ENST00000544454 INSRP06213 1382 aa18.68■□□□□ 0.58
LTBR-213ENST00000544454 PPM1GO15355 546 aaPredicted RBP18.67■□□□□ 0.58
LTBR-213ENST00000544454 KRT27Q7Z3Y8 459 aa18.67■□□□□ 0.58
LTBR-213ENST00000544454 LTV1Q96GA3 475 aaPredicted RBP18.67■□□□□ 0.58
LTBR-213ENST00000544454 CDCA7Q9BWT1 371 aaPredicted RBP18.67■□□□□ 0.58
LTBR-213ENST00000544454 LTN1O94822 1766 aa18.66■□□□□ 0.58
LTBR-213ENST00000544454 CC2D1BQ5T0F9 858 aaKnown RBP18.65■□□□□ 0.58
LTBR-213ENST00000544454 PDE3BQ13370 1112 aa18.63■□□□□ 0.57
LTBR-213ENST00000544454 RGPD5Q99666 1765 aa18.63■□□□□ 0.57
LTBR-213ENST00000544454 SMG6Q86US8 1419 aaKnown RBP18.62■□□□□ 0.57
LTBR-213ENST00000544454 ANKRD26Q9UPS8 1709 aa18.61■□□□□ 0.57
LTBR-213ENST00000544454 THSD7AQ9UPZ6 1657 aa18.61■□□□□ 0.57
LTBR-213ENST00000544454 NBPF6Q5VWK0 638 aa18.61■□□□□ 0.57
LTBR-213ENST00000544454 UPF1Q92900 1129 aaKnown RBP eCLIP18.61■□□□□ 0.57
LTBR-213ENST00000544454 NBPF4Q96M43 638 aa18.61■□□□□ 0.57
LTBR-213ENST00000544454 IL2RBP14784 551 aa18.6■□□□□ 0.57
LTBR-213ENST00000544454 DDB1Q16531 1140 aa18.6■□□□□ 0.57
LTBR-213ENST00000544454 DISP2A7MBM2 1401 aa18.59■□□□□ 0.57
LTBR-213ENST00000544454 EXOC5O00471 708 aa18.59■□□□□ 0.57
LTBR-213ENST00000544454 DDX10Q13206 875 aaKnown RBP18.59■□□□□ 0.57
LTBR-213ENST00000544454 EP400Q96L91 3159 aa18.59■□□□□ 0.57
LTBR-213ENST00000544454 PEAK1Q9H792 1746 aa18.58■□□□□ 0.57
LTBR-213ENST00000544454 CNGB1Q14028 1251 aaPredicted RBP18.58■□□□□ 0.56
LTBR-213ENST00000544454 CCDC125Q86Z20 511 aa18.58■□□□□ 0.56
LTBR-213ENST00000544454 MTHFSP49914 203 aa18.57■□□□□ 0.56
LTBR-213ENST00000544454 EIF4A2Q14240 407 aaKnown RBP18.57■□□□□ 0.56
LTBR-213ENST00000544454 FAM196AQ6ZSG2 479 aa18.57■□□□□ 0.56
LTBR-213ENST00000544454 MAP2P11137 1827 aaKnown RBP18.56■□□□□ 0.56
LTBR-213ENST00000544454 ZNF316A6NFI3 1004 aaPredicted RBP18.55■□□□□ 0.56
LTBR-213ENST00000544454 FAM182BQ5T319 152 aa18.55■□□□□ 0.56
LTBR-213ENST00000544454 EYA1Q99502 592 aa18.55■□□□□ 0.56
LTBR-213ENST00000544454 BRWD3Q6RI45 1802 aa18.54■□□□□ 0.56
LTBR-213ENST00000544454 FAM208AQ9UK61 1670 aaKnown RBP18.54■□□□□ 0.56
LTBR-213ENST00000544454 USHBP1Q8N6Y0 703 aa18.53■□□□□ 0.56
LTBR-213ENST00000544454 RAPGEF4Q8WZA2 1011 aa18.53■□□□□ 0.56
LTBR-213ENST00000544454 PARP4Q9UKK3 1724 aaKnown RBP18.52■□□□□ 0.56
LTBR-213ENST00000544454 MARCH10Q8NA82 808 aaPredicted RBP18.52■□□□□ 0.56
LTBR-213ENST00000544454 TATP17735 454 aaPredicted RBP18.51■□□□□ 0.55
LTBR-213ENST00000544454 IL13P35225 146 aa18.5■□□□□ 0.55
LTBR-213ENST00000544454 ZCRB1Q8TBF4 217 aaKnown RBP18.5■□□□□ 0.55
LTBR-213ENST00000544454 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
LTBR-213ENST00000544454 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
LTBR-213ENST00000544454 TNS2Q63HR2 1409 aa18.49■□□□□ 0.55
LTBR-213ENST00000544454 PPP2R1AP30153 589 aa18.49■□□□□ 0.55
LTBR-213ENST00000544454 SF3B2Q13435 895 aaKnown RBP18.49■□□□□ 0.55
LTBR-213ENST00000544454 OVOS2A0A0G2JMS6 1433 aa18.49■□□□□ 0.55
LTBR-213ENST00000544454 DIAPH1O60610 1272 aaKnown RBP18.48■□□□□ 0.55
LTBR-213ENST00000544454 LRRC37A3O60309 1634 aa18.48■□□□□ 0.55
LTBR-213ENST00000544454 BCL9O00512 1426 aa18.48■□□□□ 0.55
LTBR-213ENST00000544454 PARD3Q8TEW0 1356 aa18.47■□□□□ 0.55
LTBR-213ENST00000544454 RALBP1Q15311 655 aa18.47■□□□□ 0.55
LTBR-213ENST00000544454 DDX54Q8TDD1 881 aaKnown RBP18.47■□□□□ 0.55
LTBR-213ENST00000544454 MEGF6O75095 1541 aa18.47■□□□□ 0.55
LTBR-213ENST00000544454 TRIM37O94972 964 aa18.46■□□□□ 0.55
LTBR-213ENST00000544454 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms