RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 BLMP54132 1417 aaPredicted RBP24.6■■□□□ 1.53
TSFM-208ENST00000543727 SPATA31A5Q5VU36 1347 aa24.6■■□□□ 1.53
TSFM-208ENST00000543727 WASHC2AQ641Q2 1341 aa24.6■■□□□ 1.53
TSFM-208ENST00000543727 SPATA31A7Q8IWB4 1347 aa24.6■■□□□ 1.53
TSFM-208ENST00000543727 RTL1A6NKG5 1358 aa24.59■■□□□ 1.53
TSFM-208ENST00000543727 SOX12O15370 315 aa24.59■■□□□ 1.53
TSFM-208ENST00000543727 EVA1CP58658 441 aa24.59■■□□□ 1.53
TSFM-208ENST00000543727 GGNBP2Q9H3C7 697 aa24.59■■□□□ 1.53
TSFM-208ENST00000543727 CCDC9Q9Y3X0 531 aaKnown RBP24.59■■□□□ 1.53
TSFM-208ENST00000543727 WNK3Q9BYP7 1800 aa24.58■■□□□ 1.53
TSFM-208ENST00000543727 KIF24Q5T7B8 1368 aa24.58■■□□□ 1.53
TSFM-208ENST00000543727 THSD7AQ9UPZ6 1657 aa24.58■■□□□ 1.53
TSFM-208ENST00000543727 CRB1P82279 1406 aa24.58■■□□□ 1.53
TSFM-208ENST00000543727 MAP2P11137 1827 aaKnown RBP24.57■■□□□ 1.52
TSFM-208ENST00000543727 BRWD3Q6RI45 1802 aa24.56■■□□□ 1.52
TSFM-208ENST00000543727 ONECUT3O60422 494 aaPredicted RBP24.56■■□□□ 1.52
TSFM-208ENST00000543727 SPATA31A1Q5TZJ5 1347 aa24.56■■□□□ 1.52
TSFM-208ENST00000543727 ZBTB7CA1YPR0 619 aa24.55■■□□□ 1.52
TSFM-208ENST00000543727 SOCS7O14512 581 aa24.55■■□□□ 1.52
TSFM-208ENST00000543727 STRN4Q9NRL3 753 aa24.55■■□□□ 1.52
TSFM-208ENST00000543727 KNSTRNQ9Y448 316 aa24.55■■□□□ 1.52
TSFM-208ENST00000543727 WDR17Q8IZU2 1322 aa24.55■■□□□ 1.52
TSFM-208ENST00000543727 THRAP3Q9Y2W1 955 aaKnown RBP24.54■■□□□ 1.52
TSFM-208ENST00000543727 PARP4Q9UKK3 1724 aaKnown RBP24.52■■□□□ 1.52
TSFM-208ENST00000543727 AXIN2Q9Y2T1 843 aa24.52■■□□□ 1.52
TSFM-208ENST00000543727 LARP1Q6PKG0 1096 aaKnown RBP24.51■■□□□ 1.51
TSFM-208ENST00000543727 BARGINQ6ZT62 677 aa24.51■■□□□ 1.51
TSFM-208ENST00000543727 IP6K1Q92551 441 aa24.51■■□□□ 1.51
TSFM-208ENST00000543727 ERBB3P21860 1342 aa24.51■■□□□ 1.51
TSFM-208ENST00000543727 MAP3K19Q56UN5 1328 aa24.51■■□□□ 1.51
TSFM-208ENST00000543727 PEAK1Q9H792 1746 aa24.49■■□□□ 1.51
TSFM-208ENST00000543727 TCP11L2Q8N4U5 519 aa24.49■■□□□ 1.51
TSFM-208ENST00000543727 NPC1L1Q9UHC9 1359 aa24.49■■□□□ 1.51
TSFM-208ENST00000543727 FLT4P35916 1363 aa24.48■■□□□ 1.51
TSFM-208ENST00000543727 AMPHP49418 695 aa24.48■■□□□ 1.51
TSFM-208ENST00000543727 PER1O15534 1290 aaPredicted RBP24.47■■□□□ 1.51
TSFM-208ENST00000543727 FAM98CQ17RN3 349 aaKnown RBP24.47■■□□□ 1.51
TSFM-208ENST00000543727 TOM1L2Q6ZVM7 507 aa24.47■■□□□ 1.51
TSFM-208ENST00000543727 HOXC9P31274 260 aa24.46■■□□□ 1.51
TSFM-208ENST00000543727 SEPT12Q8IYM1 358 aa24.46■■□□□ 1.51
TSFM-208ENST00000543727 CARD10Q9BWT7 1032 aa24.46■■□□□ 1.51
TSFM-208ENST00000543727 SMG6Q86US8 1419 aaKnown RBP24.45■■□□□ 1.51
TSFM-208ENST00000543727 CSB-PGBD3P0DP91 1061 aa24.45■■□□□ 1.5
TSFM-208ENST00000543727 AMER1Q5JTC6 1135 aaPredicted RBP24.45■■□□□ 1.5
TSFM-208ENST00000543727 INSRP06213 1382 aa24.44■■□□□ 1.5
TSFM-208ENST00000543727 CDCA7Q9BWT1 371 aaPredicted RBP24.44■■□□□ 1.5
TSFM-208ENST00000543727 LRRC37A3O60309 1634 aa24.43■■□□□ 1.5
TSFM-208ENST00000543727 RRS1Q15050 365 aaKnown RBP24.43■■□□□ 1.5
TSFM-208ENST00000543727 ANKRD24Q8TF21 1146 aa24.43■■□□□ 1.5
TSFM-208ENST00000543727 USP35Q9P2H5 1018 aa24.42■■□□□ 1.5
TSFM-208ENST00000543727 RGPD2P0DJD1 1756 aa24.42■■□□□ 1.5
TSFM-208ENST00000543727 MORC1Q86VD1 984 aa24.41■■□□□ 1.5
TSFM-208ENST00000543727 A0A0G2JS52 829 aa24.4■■□□□ 1.5
TSFM-208ENST00000543727 MYT1Q01538 1121 aa24.4■■□□□ 1.5
TSFM-208ENST00000543727 DISP2A7MBM2 1401 aa24.39■■□□□ 1.5
TSFM-208ENST00000543727 FBLN1P23142 703 aa24.39■■□□□ 1.49
TSFM-208ENST00000543727 KRT27Q7Z3Y8 459 aa24.38■■□□□ 1.49
TSFM-208ENST00000543727 POLKQ9UBT6 870 aa24.37■■□□□ 1.49
TSFM-208ENST00000543727 NLRP2Q9NX02 1062 aa24.36■■□□□ 1.49
TSFM-208ENST00000543727 EMILIN1Q9Y6C2 1016 aa24.36■■□□□ 1.49
TSFM-208ENST00000543727 RGPD1P0DJD0 1748 aa24.33■■□□□ 1.49
TSFM-208ENST00000543727 EP400Q96L91 3159 aa24.33■■□□□ 1.49
TSFM-208ENST00000543727 HSP90AB2PQ58FF8 381 aa24.33■■□□□ 1.49
TSFM-208ENST00000543727 TNNT2P45379 298 aaPredicted RBP24.32■■□□□ 1.48
TSFM-208ENST00000543727 TNS2Q63HR2 1409 aa24.32■■□□□ 1.48
TSFM-208ENST00000543727 PDE3BQ13370 1112 aa24.31■■□□□ 1.48
TSFM-208ENST00000543727 NCAPD2Q15021 1401 aa24.31■■□□□ 1.48
TSFM-208ENST00000543727 CCDC125Q86Z20 511 aa24.31■■□□□ 1.48
TSFM-208ENST00000543727 LTV1Q96GA3 475 aaPredicted RBP24.31■■□□□ 1.48
TSFM-208ENST00000543727 PPM1GO15355 546 aaPredicted RBP24.3■■□□□ 1.48
TSFM-208ENST00000543727 IL2RBP14784 551 aa24.3■■□□□ 1.48
TSFM-208ENST00000543727 DDB1Q16531 1140 aa24.3■■□□□ 1.48
TSFM-208ENST00000543727 UPF1Q92900 1129 aaKnown RBP eCLIP24.3■■□□□ 1.48
TSFM-208ENST00000543727 CC2D1BQ5T0F9 858 aaKnown RBP24.29■■□□□ 1.48
TSFM-208ENST00000543727 PLEKHG2Q9H7P9 1386 aa24.28■■□□□ 1.48
TSFM-208ENST00000543727 OVOS2A0A0G2JMS6 1433 aa24.27■■□□□ 1.48
TSFM-208ENST00000543727 SBF2Q86WG5 1849 aa24.27■■□□□ 1.48
TSFM-208ENST00000543727 BCL9O00512 1426 aa24.27■■□□□ 1.48
TSFM-208ENST00000543727 FAM196AQ6ZSG2 479 aa24.26■■□□□ 1.47
TSFM-208ENST00000543727 SHANK3Q9BYB0 1731 aa24.25■■□□□ 1.47
TSFM-208ENST00000543727 TNS1Q9HBL0 1735 aaKnown RBP24.25■■□□□ 1.47
TSFM-208ENST00000543727 PKD1L3Q7Z443 1732 aa24.24■■□□□ 1.47
TSFM-208ENST00000543727 EXOC5O00471 708 aa24.24■■□□□ 1.47
TSFM-208ENST00000543727 NBPF6Q5VWK0 638 aa24.24■■□□□ 1.47
TSFM-208ENST00000543727 NBPF4Q96M43 638 aa24.24■■□□□ 1.47
TSFM-208ENST00000543727 MEGF6O75095 1541 aa24.21■■□□□ 1.47
TSFM-208ENST00000543727 EIF4A2Q14240 407 aaKnown RBP24.21■■□□□ 1.47
TSFM-208ENST00000543727 MTHFSP49914 203 aa24.2■■□□□ 1.46
TSFM-208ENST00000543727 RAPGEF4Q8WZA2 1011 aa24.2■■□□□ 1.46
TSFM-208ENST00000543727 IGSF1Q8N6C5 1336 aa24.19■■□□□ 1.46
TSFM-208ENST00000543727 SF3B2Q13435 895 aaKnown RBP24.18■■□□□ 1.46
TSFM-208ENST00000543727 RGPD3A6NKT7 1758 aaPredicted RBP24.18■■□□□ 1.46
TSFM-208ENST00000543727 RGPD4Q7Z3J3 1758 aa24.18■■□□□ 1.46
TSFM-208ENST00000543727 NHSQ6T4R5 1651 aa24.18■■□□□ 1.46
TSFM-208ENST00000543727 PARD3Q8TEW0 1356 aa24.17■■□□□ 1.46
TSFM-208ENST00000543727 EYA1Q99502 592 aa24.17■■□□□ 1.46
TSFM-208ENST00000543727 TATP17735 454 aaPredicted RBP24.16■■□□□ 1.46
TSFM-208ENST00000543727 DDX10Q13206 875 aaKnown RBP24.16■■□□□ 1.46
TSFM-208ENST00000543727 COL3A1P02461 1466 aaPredicted RBP24.15■■□□□ 1.46
TSFM-208ENST00000543727 MARCH10Q8NA82 808 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms