RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 HSP90B2PQ58FF3 399 aa23.16■■□□□ 1.3
SUDS3-204ENST00000543473 HOOK1Q9UJC3 728 aaKnown RBP23.16■■□□□ 1.3
SUDS3-204ENST00000543473 ADGRF5Q8IZF2 1346 aa23.16■■□□□ 1.3
SUDS3-204ENST00000543473 KINO60870 393 aaKnown RBP23.16■■□□□ 1.3
SUDS3-204ENST00000543473 ZNF692Q9BU19 519 aaPredicted RBP23.16■■□□□ 1.3
SUDS3-204ENST00000543473 ZMYND15Q9H091 742 aa23.15■■□□□ 1.3
SUDS3-204ENST00000543473 GNAI2P04899 355 aa23.15■■□□□ 1.3
SUDS3-204ENST00000543473 CTTNBP2Q8WZ74 1663 aa23.15■■□□□ 1.3
SUDS3-204ENST00000543473 DHX29Q7Z478 1369 aaKnown RBP23.15■■□□□ 1.3
SUDS3-204ENST00000543473 AKAP17AQ02040 695 aaKnown RBP23.14■■□□□ 1.3
SUDS3-204ENST00000543473 NOM1Q5C9Z4 860 aaKnown RBP23.14■■□□□ 1.3
SUDS3-204ENST00000543473 RPRD2Q5VT52 1461 aaKnown RBP23.14■■□□□ 1.3
SUDS3-204ENST00000543473 PDCL2Q8N4E4 241 aa23.14■■□□□ 1.29
SUDS3-204ENST00000543473 ZNF428Q96B54 188 aa23.14■■□□□ 1.29
SUDS3-204ENST00000543473 PLCH2O75038 1416 aa23.13■■□□□ 1.29
SUDS3-204ENST00000543473 PODXL2Q9NZ53 605 aa23.13■■□□□ 1.29
SUDS3-204ENST00000543473 ASXL2Q76L83 1435 aa23.13■■□□□ 1.29
SUDS3-204ENST00000543473 DDX58O95786 925 aaKnown RBP23.13■■□□□ 1.29
SUDS3-204ENST00000543473 ANKRD20A12PQ8NF67 263 aa23.13■■□□□ 1.29
SUDS3-204ENST00000543473 ATAD2Q6PL18 1390 aa23.12■■□□□ 1.29
SUDS3-204ENST00000543473 C8orf34Q49A92 452 aa23.12■■□□□ 1.29
SUDS3-204ENST00000543473 WAPLQ7Z5K2 1190 aa23.12■■□□□ 1.29
SUDS3-204ENST00000543473 SSH1Q8WYL5 1049 aa23.12■■□□□ 1.29
SUDS3-204ENST00000543473 TNMDQ9H2S6 317 aa23.12■■□□□ 1.29
SUDS3-204ENST00000543473 ACBD3Q9H3P7 528 aa23.12■■□□□ 1.29
SUDS3-204ENST00000543473 GTF2E1P29083 439 aaPredicted RBP23.12■■□□□ 1.29
SUDS3-204ENST00000543473 KIAA0556O60303 1618 aa23.12■■□□□ 1.29
SUDS3-204ENST00000543473 FMNL2Q96PY5 1086 aa23.11■■□□□ 1.29
SUDS3-204ENST00000543473 CWC15Q9P013 229 aaKnown RBP23.11■■□□□ 1.29
SUDS3-204ENST00000543473 SLC4A2P04920 1241 aa23.11■■□□□ 1.29
SUDS3-204ENST00000543473 KRT85P78386 507 aa23.11■■□□□ 1.29
SUDS3-204ENST00000543473 SMC2O95347 1197 aa23.11■■□□□ 1.29
SUDS3-204ENST00000543473 PANK2Q9BZ23 570 aa23.11■■□□□ 1.29
SUDS3-204ENST00000543473 LRRCC1Q9C099 1032 aa23.11■■□□□ 1.29
SUDS3-204ENST00000543473 EIF4G3O43432 1585 aaKnown RBP23.11■■□□□ 1.29
SUDS3-204ENST00000543473 TMPOP42166 694 aaKnown RBP23.1■■□□□ 1.29
SUDS3-204ENST00000543473 TRDNQ13061 729 aa23.1■■□□□ 1.29
SUDS3-204ENST00000543473 AEBP1Q8IUX7 1158 aa23.1■■□□□ 1.29
SUDS3-204ENST00000543473 CLSTN1O94985 981 aa23.1■■□□□ 1.29
SUDS3-204ENST00000543473 SYTL4Q96C24 671 aaPredicted RBP23.1■■□□□ 1.29
SUDS3-204ENST00000543473 FSD1Q9BTV5 496 aa23.1■■□□□ 1.29
SUDS3-204ENST00000543473 PRDM10Q9NQV6 1147 aa23.1■■□□□ 1.29
SUDS3-204ENST00000543473 CEBPAP49715 358 aaPredicted RBP23.09■■□□□ 1.29
SUDS3-204ENST00000543473 CCDC30Q5VVM6 783 aa23.09■■□□□ 1.29
SUDS3-204ENST00000543473 PDILTQ8N807 584 aa23.09■■□□□ 1.29
SUDS3-204ENST00000543473 CYP46A1Q9Y6A2 500 aa23.09■■□□□ 1.29
SUDS3-204ENST00000543473 CCDC61Q9Y6R9 512 aa23.08■■□□□ 1.29
SUDS3-204ENST00000543473 RPAP2Q8IXW5 612 aaPredicted RBP23.08■■□□□ 1.29
SUDS3-204ENST00000543473 OLFM4Q6UX06 510 aa23.07■■□□□ 1.28
SUDS3-204ENST00000543473 APPP05067 770 aa23.07■■□□□ 1.28
SUDS3-204ENST00000543473 SULT6B1Q6IMI4 303 aa23.07■■□□□ 1.28
SUDS3-204ENST00000543473 CBX1P83916 185 aa23.06■■□□□ 1.28
SUDS3-204ENST00000543473 LARP1BQ659C4 914 aaKnown RBP23.06■■□□□ 1.28
SUDS3-204ENST00000543473 NUDT16Q96DE0 195 aaKnown RBP23.06■■□□□ 1.28
SUDS3-204ENST00000543473 CEBPZQ03701 1054 aaKnown RBP23.06■■□□□ 1.28
SUDS3-204ENST00000543473 CCT4P50991 539 aaKnown RBP23.06■■□□□ 1.28
SUDS3-204ENST00000543473 NSD3Q9BZ95 1437 aa23.05■■□□□ 1.28
SUDS3-204ENST00000543473 WDR62O43379 1518 aa23.05■■□□□ 1.28
SUDS3-204ENST00000543473 CCP110O43303 1012 aa23.05■■□□□ 1.28
SUDS3-204ENST00000543473 KLHL40Q2TBA0 621 aa23.04■■□□□ 1.28
SUDS3-204ENST00000543473 PCMTD1Q96MG8 357 aaPredicted RBP23.04■■□□□ 1.28
SUDS3-204ENST00000543473 BAG4O95429 457 aaKnown RBP23.04■■□□□ 1.28
SUDS3-204ENST00000543473 NUP62CLQ9H1M0 184 aa23.04■■□□□ 1.28
SUDS3-204ENST00000543473 GAS2L2Q8NHY3 880 aa23.04■■□□□ 1.28
SUDS3-204ENST00000543473 RALYLQ86SE5 291 aaKnown RBP23.03■■□□□ 1.28
SUDS3-204ENST00000543473 RRS1Q15050 365 aaKnown RBP23.03■■□□□ 1.28
SUDS3-204ENST00000543473 SYCP2Q9BX26 1530 aa23.03■■□□□ 1.28
SUDS3-204ENST00000543473 MCM5P33992 734 aa23.03■■□□□ 1.28
SUDS3-204ENST00000543473 SRCIN1Q9C0H9 1055 aa23.03■■□□□ 1.28
SUDS3-204ENST00000543473 HIP1O00291 1037 aa23.02■■□□□ 1.28
SUDS3-204ENST00000543473 TRIM27P14373 513 aa23.02■■□□□ 1.28
SUDS3-204ENST00000543473 FCHSD2O94868 740 aa23.02■■□□□ 1.27
SUDS3-204ENST00000543473 NFXL1Q6ZNB6 911 aa23.02■■□□□ 1.27
SUDS3-204ENST00000543473 NOS1P29475 1434 aa23.01■■□□□ 1.27
SUDS3-204ENST00000543473 SAFBQ15424 915 aaKnown RBP eCLIP23.01■■□□□ 1.27
SUDS3-204ENST00000543473 KDM5BQ9UGL1 1544 aa23.01■■□□□ 1.27
SUDS3-204ENST00000543473 UPF3BQ9BZI7 483 aaKnown RBP23.01■■□□□ 1.27
SUDS3-204ENST00000543473 NUP160Q12769 1436 aa23.01■■□□□ 1.27
SUDS3-204ENST00000543473 FILIP1Q7Z7B0 1213 aa23■■□□□ 1.27
SUDS3-204ENST00000543473 ZNF396Q96N95 335 aaPredicted RBP23■■□□□ 1.27
SUDS3-204ENST00000543473 WDR7Q9Y4E6 1490 aa23■■□□□ 1.27
SUDS3-204ENST00000543473 BMP2KLQ5H9B9 411 aa23■■□□□ 1.27
SUDS3-204ENST00000543473 AK7Q96M32 723 aa23■■□□□ 1.27
SUDS3-204ENST00000543473 NEUROD6Q96NK8 337 aa23■■□□□ 1.27
SUDS3-204ENST00000543473 RUFY1Q96T51 708 aa23■■□□□ 1.27
SUDS3-204ENST00000543473 FAM135AQ9P2D6 1515 aa23■■□□□ 1.27
SUDS3-204ENST00000543473 USP25Q9UHP3 1055 aa22.99■■□□□ 1.27
SUDS3-204ENST00000543473 MAP4K4O95819 1239 aaPredicted RBP22.99■■□□□ 1.27
SUDS3-204ENST00000543473 ANKRD1Q15327 319 aa22.99■■□□□ 1.27
SUDS3-204ENST00000543473 SPATA32Q96LK8 384 aa22.99■■□□□ 1.27
SUDS3-204ENST00000543473 TRAPPC8Q9Y2L5 1435 aa22.99■■□□□ 1.27
SUDS3-204ENST00000543473 ALDH1L2Q3SY69 923 aa22.99■■□□□ 1.27
SUDS3-204ENST00000543473 STK3Q13188 491 aa22.98■■□□□ 1.27
SUDS3-204ENST00000543473 PDE4CQ08493 712 aa22.98■■□□□ 1.27
SUDS3-204ENST00000543473 AIMP1Q12904 312 aaKnown RBP22.98■■□□□ 1.27
SUDS3-204ENST00000543473 STK38Q15208 465 aa22.98■■□□□ 1.27
SUDS3-204ENST00000543473 DYNC1I1O14576 645 aa22.98■■□□□ 1.27
SUDS3-204ENST00000543473 MAP3K11Q16584 847 aa22.98■■□□□ 1.27
SUDS3-204ENST00000543473 CCDC183Q5T5S1 534 aa22.98■■□□□ 1.27
SUDS3-204ENST00000543473 PCDHB15Q9Y5E8 787 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms