RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 NME9Q86XW9 330 aa14.3□□□□□ -0.12
NPIPB4-217ENST00000543449 COG3Q96JB2 828 aa14.3□□□□□ -0.12
NPIPB4-217ENST00000543449 WDR17Q8IZU2 1322 aa14.3□□□□□ -0.12
NPIPB4-217ENST00000543449 THSD7AQ9UPZ6 1657 aa14.3□□□□□ -0.12
NPIPB4-217ENST00000543449 PDE3BQ13370 1112 aa14.29□□□□□ -0.12
NPIPB4-217ENST00000543449 TOM1L2Q6ZVM7 507 aa14.29□□□□□ -0.12
NPIPB4-217ENST00000543449 USP35Q9P2H5 1018 aa14.29□□□□□ -0.12
NPIPB4-217ENST00000543449 NFAT5O94916 1531 aa14.29□□□□□ -0.12
NPIPB4-217ENST00000543449 CSB-PGBD3P0DP91 1061 aa14.28□□□□□ -0.12
NPIPB4-217ENST00000543449 FAM196AQ6ZSG2 479 aa14.28□□□□□ -0.12
NPIPB4-217ENST00000543449 BRWD3Q6RI45 1802 aa14.27□□□□□ -0.12
NPIPB4-217ENST00000543449 OVOS2A0A0J9YW53 1432 aa14.27□□□□□ -0.12
NPIPB4-217ENST00000543449 OVOS2Q6IE36 1432 aa14.27□□□□□ -0.12
NPIPB4-217ENST00000543449 SOX12O15370 315 aa14.27□□□□□ -0.13
NPIPB4-217ENST00000543449 BAG6P46379 1132 aa14.27□□□□□ -0.13
NPIPB4-217ENST00000543449 CCDC7Q96M83 1385 aa14.26□□□□□ -0.13
NPIPB4-217ENST00000543449 CARD10Q9BWT7 1032 aa14.26□□□□□ -0.13
NPIPB4-217ENST00000543449 AXIN2Q9Y2T1 843 aa14.25□□□□□ -0.13
NPIPB4-217ENST00000543449 COL18A1P39060 1754 aa14.24□□□□□ -0.13
NPIPB4-217ENST00000543449 ZRANB1Q9UGI0 708 aa14.24□□□□□ -0.13
NPIPB4-217ENST00000543449 DDB1Q16531 1140 aa14.23□□□□□ -0.13
NPIPB4-217ENST00000543449 ERBB3P21860 1342 aa14.22□□□□□ -0.13
NPIPB4-217ENST00000543449 IP6K1Q92551 441 aa14.22□□□□□ -0.13
NPIPB4-217ENST00000543449 RTL1A6NKG5 1358 aa14.22□□□□□ -0.13
NPIPB4-217ENST00000543449 FYB1O15117 783 aa14.21□□□□□ -0.13
NPIPB4-217ENST00000543449 HSPA5P11021 654 aaKnown RBP14.21□□□□□ -0.13
NPIPB4-217ENST00000543449 AMPHP49418 695 aa14.21□□□□□ -0.13
NPIPB4-217ENST00000543449 DISP2A7MBM2 1401 aa14.21□□□□□ -0.13
NPIPB4-217ENST00000543449 PARP4Q9UKK3 1724 aaKnown RBP14.21□□□□□ -0.14
NPIPB4-217ENST00000543449 CGNL1Q0VF96 1302 aa14.2□□□□□ -0.14
NPIPB4-217ENST00000543449 ANKRD24Q8TF21 1146 aa14.2□□□□□ -0.14
NPIPB4-217ENST00000543449 NLRP2Q9NX02 1062 aa14.2□□□□□ -0.14
NPIPB4-217ENST00000543449 OVOS2A0A0G2JMS6 1433 aa14.2□□□□□ -0.14
NPIPB4-217ENST00000543449 RGPD1P0DJD0 1748 aa14.2□□□□□ -0.14
NPIPB4-217ENST00000543449 KIF24Q5T7B8 1368 aa14.2□□□□□ -0.14
NPIPB4-217ENST00000543449 PARD3Q8TEW0 1356 aa14.2□□□□□ -0.14
NPIPB4-217ENST00000543449 EXOC5O00471 708 aa14.19□□□□□ -0.14
NPIPB4-217ENST00000543449 NSD3Q9BZ95 1437 aa14.18□□□□□ -0.14
NPIPB4-217ENST00000543449 GGNBP2Q9H3C7 697 aa14.18□□□□□ -0.14
NPIPB4-217ENST00000543449 MAP3K19Q56UN5 1328 aa14.17□□□□□ -0.14
NPIPB4-217ENST00000543449 BCL9O00512 1426 aa14.17□□□□□ -0.14
NPIPB4-217ENST00000543449 SMG6Q86US8 1419 aaKnown RBP14.17□□□□□ -0.14
NPIPB4-217ENST00000543449 LTN1O94822 1766 aa14.17□□□□□ -0.14
NPIPB4-217ENST00000543449 IL2RBP14784 551 aa14.17□□□□□ -0.14
NPIPB4-217ENST00000543449 HOXC9P31274 260 aa14.17□□□□□ -0.14
NPIPB4-217ENST00000543449 DEFB132Q7Z7B7 95 aa14.17□□□□□ -0.14
NPIPB4-217ENST00000543449 POLR3GLQ9BT43 218 aa14.17□□□□□ -0.14
NPIPB4-217ENST00000543449 TRIM37O94972 964 aa14.16□□□□□ -0.14
NPIPB4-217ENST00000543449 FAM182BQ5T319 152 aa14.16□□□□□ -0.14
NPIPB4-217ENST00000543449 FAM208AQ9UK61 1670 aaKnown RBP14.16□□□□□ -0.14
NPIPB4-217ENST00000543449 MYOM1P52179 1685 aa14.15□□□□□ -0.14
NPIPB4-217ENST00000543449 APBA3O96018 575 aa14.15□□□□□ -0.14
NPIPB4-217ENST00000543449 CARD14Q9BXL6 1004 aa14.15□□□□□ -0.14
NPIPB4-217ENST00000543449 RGPD5Q99666 1765 aa14.14□□□□□ -0.15
NPIPB4-217ENST00000543449 NSD2O96028 1365 aa14.14□□□□□ -0.15
NPIPB4-217ENST00000543449 FLT4P35916 1363 aa14.14□□□□□ -0.15
NPIPB4-217ENST00000543449 KIF20BQ96Q89 1820 aa14.14□□□□□ -0.15
NPIPB4-217ENST00000543449 LRRC37A3O60309 1634 aa14.14□□□□□ -0.15
NPIPB4-217ENST00000543449 TNS2Q63HR2 1409 aa14.14□□□□□ -0.15
NPIPB4-217ENST00000543449 WNK3Q9BYP7 1800 aa14.13□□□□□ -0.15
NPIPB4-217ENST00000543449 INSRP06213 1382 aa14.12□□□□□ -0.15
NPIPB4-217ENST00000543449 EN1Q05925 392 aaPredicted RBP14.12□□□□□ -0.15
NPIPB4-217ENST00000543449 LTV1Q96GA3 475 aaPredicted RBP14.12□□□□□ -0.15
NPIPB4-217ENST00000543449 BCL11BQ9C0K0 894 aaPredicted RBP14.12□□□□□ -0.15
NPIPB4-217ENST00000543449 RRS1Q15050 365 aaKnown RBP14.11□□□□□ -0.15
NPIPB4-217ENST00000543449 MARCH10Q8NA82 808 aaPredicted RBP14.11□□□□□ -0.15
NPIPB4-217ENST00000543449 CAMKK2Q96RR4 588 aa14.11□□□□□ -0.15
NPIPB4-217ENST00000543449 PANK3Q9H999 370 aa14.11□□□□□ -0.15
NPIPB4-217ENST00000543449 TNS1Q9HBL0 1735 aaKnown RBP14.1□□□□□ -0.15
NPIPB4-217ENST00000543449 PLSCR1O15162 318 aa14.1□□□□□ -0.15
NPIPB4-217ENST00000543449 NBPF14Q5TI25 921 aa14.1□□□□□ -0.15
NPIPB4-217ENST00000543449 KNSTRNQ9Y448 316 aa14.1□□□□□ -0.15
NPIPB4-217ENST00000543449 PEAK1Q9H792 1746 aa14.09□□□□□ -0.15
NPIPB4-217ENST00000543449 EZH2Q15910 746 aaKnown RBP14.08□□□□□ -0.16
NPIPB4-217ENST00000543449 RAPGEF4Q8WZA2 1011 aa14.08□□□□□ -0.16
NPIPB4-217ENST00000543449 WASHC2AQ641Q2 1341 aa14.07□□□□□ -0.16
NPIPB4-217ENST00000543449 TATP17735 454 aaPredicted RBP14.06□□□□□ -0.16
NPIPB4-217ENST00000543449 FBLN1P23142 703 aa14.06□□□□□ -0.16
NPIPB4-217ENST00000543449 HSP90AB2PQ58FF8 381 aa14.06□□□□□ -0.16
NPIPB4-217ENST00000543449 ZCRB1Q8TBF4 217 aaKnown RBP14.06□□□□□ -0.16
NPIPB4-217ENST00000543449 RGPD3A6NKT7 1758 aaPredicted RBP14.05□□□□□ -0.16
NPIPB4-217ENST00000543449 RGPD4Q7Z3J3 1758 aa14.05□□□□□ -0.16
NPIPB4-217ENST00000543449 PPM1GO15355 546 aaPredicted RBP14.05□□□□□ -0.16
NPIPB4-217ENST00000543449 ADRA2BP18089 450 aa14.05□□□□□ -0.16
NPIPB4-217ENST00000543449 HMGB2P26583 209 aaKnown RBP14.05□□□□□ -0.16
NPIPB4-217ENST00000543449 NBPF6Q5VWK0 638 aa14.05□□□□□ -0.16
NPIPB4-217ENST00000543449 NBPF4Q96M43 638 aa14.05□□□□□ -0.16
NPIPB4-217ENST00000543449 EMILIN1Q9Y6C2 1016 aa14.05□□□□□ -0.16
NPIPB4-217ENST00000543449 KIF7Q2M1P5 1343 aa14.05□□□□□ -0.16
NPIPB4-217ENST00000543449 MORC1Q86VD1 984 aa14.04□□□□□ -0.16
NPIPB4-217ENST00000543449 POLKQ9UBT6 870 aa14.04□□□□□ -0.16
NPIPB4-217ENST00000543449 PLEKHG2Q9H7P9 1386 aa14.04□□□□□ -0.16
NPIPB4-217ENST00000543449 ANKRD26Q9UPS8 1709 aa14.04□□□□□ -0.16
NPIPB4-217ENST00000543449 EP400Q96L91 3159 aa14.04□□□□□ -0.16
NPIPB4-217ENST00000543449 PIAS4Q8N2W9 510 aaPredicted RBP14.03□□□□□ -0.16
NPIPB4-217ENST00000543449 DDX54Q8TDD1 881 aaKnown RBP14.03□□□□□ -0.16
NPIPB4-217ENST00000543449 SBF2Q86WG5 1849 aa14.02□□□□□ -0.16
NPIPB4-217ENST00000543449 PCDH11XQ9BZA7 1347 aa14.02□□□□□ -0.17
NPIPB4-217ENST00000543449 PCDH11YQ9BZA8 1340 aa14.02□□□□□ -0.17
NPIPB4-217ENST00000543449 RREB1Q92766 1687 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms