RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 ZFAND3Q9H8U3 227 aa7.06□□□□□ -1.28
GTF2H3-213ENST00000543415 GMPRP36959 345 aa7.05□□□□□ -1.28
GTF2H3-213ENST00000543415 ATP1B4Q9UN42 357 aaPredicted RBP7.05□□□□□ -1.28
GTF2H3-213ENST00000543415 EMILIN1Q9Y6C2 1016 aa7.05□□□□□ -1.28
GTF2H3-213ENST00000543415 MAGEB6P1A0A0J9YX57 407 aa7.04□□□□□ -1.28
GTF2H3-213ENST00000543415 SUPT5HO00267 1087 aaKnown RBP7.04□□□□□ -1.28
GTF2H3-213ENST00000543415 MAN1A2O60476 641 aa7.04□□□□□ -1.28
GTF2H3-213ENST00000543415 FSHRP23945 695 aa7.04□□□□□ -1.28
GTF2H3-213ENST00000543415 RFC5P40937 340 aa7.04□□□□□ -1.28
GTF2H3-213ENST00000543415 PCMTD1Q96MG8 357 aaPredicted RBP7.04□□□□□ -1.28
GTF2H3-213ENST00000543415 AP1G2O75843 785 aa7.03□□□□□ -1.28
GTF2H3-213ENST00000543415 BMP2P12643 396 aa7.03□□□□□ -1.28
GTF2H3-213ENST00000543415 VEGFBP49765 207 aa7.03□□□□□ -1.28
GTF2H3-213ENST00000543415 C6orf118Q5T5N4 469 aa7.03□□□□□ -1.28
GTF2H3-213ENST00000543415 PDXDC2PQ6P474 469 aa7.03□□□□□ -1.28
GTF2H3-213ENST00000543415 CCDC116Q8IYX3 515 aa7.03□□□□□ -1.28
GTF2H3-213ENST00000543415 LINC00528Q8N1L1 170 aa7.03□□□□□ -1.28
GTF2H3-213ENST00000543415 MEIOBQ8N635 442 aa7.03□□□□□ -1.28
GTF2H3-213ENST00000543415 HMX1Q9NP08 348 aaPredicted RBP7.03□□□□□ -1.28
GTF2H3-213ENST00000543415 CDV3Q9UKY7 258 aaKnown RBP7.03□□□□□ -1.28
GTF2H3-213ENST00000543415 ZC3H4Q9UPT8 1303 aaKnown RBP7.02□□□□□ -1.28
GTF2H3-213ENST00000543415 ERFEQ4G0M1 354 aa7.02□□□□□ -1.29
GTF2H3-213ENST00000543415 ZSCAN1Q8NBB4 408 aa7.02□□□□□ -1.29
GTF2H3-213ENST00000543415 TSEN34Q9BSV6 310 aaKnown RBP7.02□□□□□ -1.29
GTF2H3-213ENST00000543415 CARD14Q9BXL6 1004 aa7.02□□□□□ -1.29
GTF2H3-213ENST00000543415 FKBPLQ9UIM3 349 aa7.02□□□□□ -1.29
GTF2H3-213ENST00000543415 ERBB4Q15303 1308 aa7.01□□□□□ -1.29
GTF2H3-213ENST00000543415 USP17L8P0C7I0 530 aa7.01□□□□□ -1.29
GTF2H3-213ENST00000543415 EPS8L1Q8TE68 723 aa7.01□□□□□ -1.29
GTF2H3-213ENST00000543415 ARHGAP9Q9BRR9 750 aa7.01□□□□□ -1.29
GTF2H3-213ENST00000543415 SOBPA7XYQ1 873 aa7□□□□□ -1.29
GTF2H3-213ENST00000543415 VSIG8P0DPA2 414 aa7□□□□□ -1.29
GTF2H3-213ENST00000543415 NR6A1Q15406 480 aa7□□□□□ -1.29
GTF2H3-213ENST00000543415 PGPEP1Q9NXJ5 209 aa7□□□□□ -1.29
GTF2H3-213ENST00000543415 DHX9Q08211 1270 aaKnown RBP6.99□□□□□ -1.29
GTF2H3-213ENST00000543415 ZBTB33Q86T24 672 aa6.99□□□□□ -1.29
GTF2H3-213ENST00000543415 PNMA1Q8ND90 353 aa6.99□□□□□ -1.29
GTF2H3-213ENST00000543415 SLC10A4Q96EP9 437 aa6.99□□□□□ -1.29
GTF2H3-213ENST00000543415 GPSM3Q9Y4H4 160 aa6.99□□□□□ -1.29
GTF2H3-213ENST00000543415 SOS2Q07890 1332 aaPredicted RBP6.99□□□□□ -1.29
GTF2H3-213ENST00000543415 PTK2Q05397 1052 aa6.98□□□□□ -1.29
GTF2H3-213ENST00000543415 PPP1R26Q5T8A7 1209 aaPredicted RBP6.98□□□□□ -1.29
GTF2H3-213ENST00000543415 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.97□□□□□ -1.29
GTF2H3-213ENST00000543415 KCTD15Q96SI1 283 aaPredicted RBP6.97□□□□□ -1.29
GTF2H3-213ENST00000543415 TRIM34Q9BYJ4 488 aa6.97□□□□□ -1.29
GTF2H3-213ENST00000543415 TTLL8A6PVC2 850 aa6.96□□□□□ -1.3
GTF2H3-213ENST00000543415 PPFIA3O75145 1194 aa6.96□□□□□ -1.3
GTF2H3-213ENST00000543415 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.3
GTF2H3-213ENST00000543415 Q6ZVU0 165 aa6.96□□□□□ -1.3
GTF2H3-213ENST00000543415 DNMT3LQ9UJW3 386 aa6.96□□□□□ -1.3
GTF2H3-213ENST00000543415 OCSTAMPQ9BR26 566 aa6.95□□□□□ -1.3
GTF2H3-213ENST00000543415 NBPF20Q3BBV1 942 aa6.94□□□□□ -1.3
GTF2H3-213ENST00000543415 TMEM259Q4ZIN3 620 aa6.94□□□□□ -1.3
GTF2H3-213ENST00000543415 GJD4Q96KN9 370 aaPredicted RBP6.94□□□□□ -1.3
GTF2H3-213ENST00000543415 ZMYND15Q9H091 742 aa6.94□□□□□ -1.3
GTF2H3-213ENST00000543415 SPINT1O43278 529 aa6.93□□□□□ -1.3
GTF2H3-213ENST00000543415 ADAM32Q8TC27 787 aa6.93□□□□□ -1.3
GTF2H3-213ENST00000543415 GPR37L1O60883 481 aa6.92□□□□□ -1.3
GTF2H3-213ENST00000543415 CBLBQ13191 982 aa6.92□□□□□ -1.3
GTF2H3-213ENST00000543415 INTS6LQ5JSJ4 861 aaKnown RBP6.92□□□□□ -1.3
GTF2H3-213ENST00000543415 MTMR14Q8NCE2 650 aa6.92□□□□□ -1.3
GTF2H3-213ENST00000543415 TRIM52Q96A61 297 aa6.92□□□□□ -1.3
GTF2H3-213ENST00000543415 SNRKQ9NRH2 765 aa6.92□□□□□ -1.3
GTF2H3-213ENST00000543415 PTSQ03393 145 aa6.91□□□□□ -1.3
GTF2H3-213ENST00000543415 FIGNL2A6NMB9 653 aa6.9□□□□□ -1.3
GTF2H3-213ENST00000543415 FLIIQ13045 1269 aa6.9□□□□□ -1.3
GTF2H3-213ENST00000543415 DZIP3Q86Y13 1208 aaKnown RBP6.89□□□□□ -1.31
GTF2H3-213ENST00000543415 BANK1Q8NDB2 785 aa6.89□□□□□ -1.31
GTF2H3-213ENST00000543415 RELBQ01201 579 aa6.88□□□□□ -1.31
GTF2H3-213ENST00000543415 NANOS1Q8WY41 292 aaKnown RBP6.88□□□□□ -1.31
GTF2H3-213ENST00000543415 PODXL2Q9NZ53 605 aa6.88□□□□□ -1.31
GTF2H3-213ENST00000543415 SEPT12Q8IYM1 358 aa6.87□□□□□ -1.31
GTF2H3-213ENST00000543415 CCDC155Q8N6L0 562 aa6.87□□□□□ -1.31
GTF2H3-213ENST00000543415 AGBL1Q96MI9 1066 aa6.87□□□□□ -1.31
GTF2H3-213ENST00000543415 SLC35F4A4IF30 521 aa6.86□□□□□ -1.31
GTF2H3-213ENST00000543415 ESPNB1AK53 854 aa6.86□□□□□ -1.31
GTF2H3-213ENST00000543415 ADH1AP07327 375 aa6.86□□□□□ -1.31
GTF2H3-213ENST00000543415 CTSOP43234 321 aaPredicted RBP6.86□□□□□ -1.31
GTF2H3-213ENST00000543415 INSM2Q96T92 566 aaPredicted RBP6.86□□□□□ -1.31
GTF2H3-213ENST00000543415 POLMQ9NP87 494 aaPredicted RBP6.86□□□□□ -1.31
GTF2H3-213ENST00000543415 ERVH48-1M5A8F1 160 aa6.85□□□□□ -1.31
GTF2H3-213ENST00000543415 SOCS7O14512 581 aa6.85□□□□□ -1.31
GTF2H3-213ENST00000543415 RAB15P59190 212 aa6.85□□□□□ -1.31
GTF2H3-213ENST00000543415 CCDC125Q86Z20 511 aa6.85□□□□□ -1.31
GTF2H3-213ENST00000543415 ZNF784Q8NCA9 323 aaPredicted RBP6.85□□□□□ -1.31
GTF2H3-213ENST00000543415 TMPRSS4Q9NRS4 437 aa6.85□□□□□ -1.31
GTF2H3-213ENST00000543415 FBXO45P0C2W1 286 aa6.84□□□□□ -1.31
GTF2H3-213ENST00000543415 ITGA6P23229 1130 aa6.84□□□□□ -1.31
GTF2H3-213ENST00000543415 PTGIRP43119 386 aa6.84□□□□□ -1.31
GTF2H3-213ENST00000543415 GPR161Q8N6U8 529 aaKnown RBP6.84□□□□□ -1.31
GTF2H3-213ENST00000543415 RNF217Q8TC41 542 aa6.84□□□□□ -1.31
GTF2H3-213ENST00000543415 CNTNAP3BQ96NU0 1288 aa6.84□□□□□ -1.31
GTF2H3-213ENST00000543415 ARID3AQ99856 593 aa6.84□□□□□ -1.31
GTF2H3-213ENST00000543415 CNTNAP3Q9BZ76 1288 aa6.84□□□□□ -1.31
GTF2H3-213ENST00000543415 ZNF395Q9H8N7 513 aaPredicted RBP6.84□□□□□ -1.31
GTF2H3-213ENST00000543415 ZBBXA8MT70 800 aa6.83□□□□□ -1.32
GTF2H3-213ENST00000543415 LILRA1O75019 489 aa6.83□□□□□ -1.32
GTF2H3-213ENST00000543415 UBTFP17480 764 aaKnown RBP6.83□□□□□ -1.32
GTF2H3-213ENST00000543415 SV2AQ7L0J3 742 aa6.83□□□□□ -1.32
GTF2H3-213ENST00000543415 ZNF592Q92610 1267 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms