RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 PHF8Q9UPP1 1060 aa12.42□□□□□ -0.42
LDHA-220ENST00000542179 PYGBP11216 843 aa12.41□□□□□ -0.42
LDHA-220ENST00000542179 ATN1P54259 1190 aaPredicted RBP12.41□□□□□ -0.42
LDHA-220ENST00000542179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.41□□□□□ -0.42
LDHA-220ENST00000542179 FAM9BQ8IZU0 186 aa12.41□□□□□ -0.42
LDHA-220ENST00000542179 PMFBP1Q8TBY8 1022 aa12.41□□□□□ -0.42
LDHA-220ENST00000542179 ZNF335Q9H4Z2 1342 aaPredicted RBP12.4□□□□□ -0.42
LDHA-220ENST00000542179 XIRP1Q702N8 1843 aaKnown RBP12.4□□□□□ -0.42
LDHA-220ENST00000542179 CENPBP07199 599 aaPredicted RBP12.4□□□□□ -0.42
LDHA-220ENST00000542179 ATF3P18847 181 aa12.4□□□□□ -0.42
LDHA-220ENST00000542179 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
LDHA-220ENST00000542179 IFNL1Q8IU54 200 aa12.4□□□□□ -0.42
LDHA-220ENST00000542179 METRNQ9UJH8 293 aa12.4□□□□□ -0.42
LDHA-220ENST00000542179 MSH6P52701 1360 aa12.4□□□□□ -0.42
LDHA-220ENST00000542179 C1orf167Q5SNV9 1468 aa12.4□□□□□ -0.43
LDHA-220ENST00000542179 MST1RQ04912 1400 aa12.39□□□□□ -0.43
LDHA-220ENST00000542179 ESCO1Q5FWF5 840 aa12.39□□□□□ -0.43
LDHA-220ENST00000542179 NME9Q86XW9 330 aa12.39□□□□□ -0.43
LDHA-220ENST00000542179 TRPC6Q9Y210 931 aa12.39□□□□□ -0.43
LDHA-220ENST00000542179 AATKQ6ZMQ8 1374 aa12.39□□□□□ -0.43
LDHA-220ENST00000542179 USP31Q70CQ4 1352 aa12.39□□□□□ -0.43
LDHA-220ENST00000542179 MTHFSP49914 203 aa12.38□□□□□ -0.43
LDHA-220ENST00000542179 COG3Q96JB2 828 aa12.38□□□□□ -0.43
LDHA-220ENST00000542179 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
LDHA-220ENST00000542179 OVOS2A0A0J9YW53 1432 aa12.37□□□□□ -0.43
LDHA-220ENST00000542179 OVOS2Q6IE36 1432 aa12.37□□□□□ -0.43
LDHA-220ENST00000542179 USP54Q70EL1 1684 aa12.36□□□□□ -0.43
LDHA-220ENST00000542179 PNPLA6Q8IY17 1366 aa12.36□□□□□ -0.43
LDHA-220ENST00000542179 TNNT2P45379 298 aaPredicted RBP12.36□□□□□ -0.43
LDHA-220ENST00000542179 CERKQ8TCT0 537 aa12.36□□□□□ -0.43
LDHA-220ENST00000542179 CFAP53Q96M91 514 aa12.36□□□□□ -0.43
LDHA-220ENST00000542179 ORAI2Q96SN7 254 aa12.36□□□□□ -0.43
LDHA-220ENST00000542179 TTLL13PA6NNM8 815 aa12.35□□□□□ -0.43
LDHA-220ENST00000542179 PSME1Q06323 249 aa12.35□□□□□ -0.43
LDHA-220ENST00000542179 SMG6Q86US8 1419 aaKnown RBP12.35□□□□□ -0.43
LDHA-220ENST00000542179 HNRNPUQ00839 825 aaKnown RBP eCLIP12.34□□□□□ -0.43
LDHA-220ENST00000542179 POLKQ9UBT6 870 aa12.34□□□□□ -0.43
LDHA-220ENST00000542179 PIK3C2AO00443 1686 aa12.34□□□□□ -0.43
LDHA-220ENST00000542179 BLMP54132 1417 aaPredicted RBP12.34□□□□□ -0.43
LDHA-220ENST00000542179 WDR43Q15061 677 aaKnown RBP eCLIP12.33□□□□□ -0.445e-7■□□□□ 10.4
LDHA-220ENST00000542179 CIZ1Q9ULV3 898 aaPredicted RBP12.33□□□□□ -0.44
LDHA-220ENST00000542179 ADAMTS8Q9UP79 889 aa12.33□□□□□ -0.44
LDHA-220ENST00000542179 SHPRHQ149N8 1683 aa12.32□□□□□ -0.44
LDHA-220ENST00000542179 FOXO3O43524 673 aa12.32□□□□□ -0.44
LDHA-220ENST00000542179 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
LDHA-220ENST00000542179 LTBP4Q8N2S1 1624 aa12.32□□□□□ -0.44
LDHA-220ENST00000542179 COL3A1P02461 1466 aaPredicted RBP12.32□□□□□ -0.44
LDHA-220ENST00000542179 ZBED9Q6R2W3 1325 aa12.32□□□□□ -0.44
LDHA-220ENST00000542179 MAP2P11137 1827 aaKnown RBP12.32□□□□□ -0.44
LDHA-220ENST00000542179 ABTB2Q8N961 1025 aa12.31□□□□□ -0.44
LDHA-220ENST00000542179 TMEM106CQ9BVX2 250 aa12.31□□□□□ -0.44
LDHA-220ENST00000542179 CDK12Q9NYV4 1490 aaPredicted RBP12.31□□□□□ -0.44
LDHA-220ENST00000542179 TRPM3Q9HCF6 1732 aaPredicted RBP12.31□□□□□ -0.44
LDHA-220ENST00000542179 NLRP6P59044 892 aa12.3□□□□□ -0.44
LDHA-220ENST00000542179 KRT28Q7Z3Y7 464 aa12.3□□□□□ -0.44
LDHA-220ENST00000542179 SLAIN2Q9P270 581 aa12.3□□□□□ -0.44
LDHA-220ENST00000542179 MARF1Q9Y4F3 1742 aaKnown RBP12.3□□□□□ -0.44
LDHA-220ENST00000542179 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
LDHA-220ENST00000542179 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
LDHA-220ENST00000542179 NUDCQ9Y266 331 aa12.29□□□□□ -0.44
LDHA-220ENST00000542179 NPHP3Q7Z494 1330 aa12.29□□□□□ -0.44
LDHA-220ENST00000542179 SBNO1A3KN83 1393 aa12.29□□□□□ -0.44
LDHA-220ENST00000542179 KIF24Q5T7B8 1368 aa12.29□□□□□ -0.44
LDHA-220ENST00000542179 POTEB2H3BUK9 544 aa12.28□□□□□ -0.44
LDHA-220ENST00000542179 DIAPH1O60610 1272 aaKnown RBP12.28□□□□□ -0.44
LDHA-220ENST00000542179 SEC24BO95487 1268 aa12.28□□□□□ -0.44
LDHA-220ENST00000542179 FBLN1P23142 703 aa12.28□□□□□ -0.44
LDHA-220ENST00000542179 BRINP3Q76B58 766 aa12.28□□□□□ -0.44
LDHA-220ENST00000542179 PCDHB8Q9UN66 801 aa12.28□□□□□ -0.44
LDHA-220ENST00000542179 IER5LQ5T953 404 aa12.27□□□□□ -0.45
LDHA-220ENST00000542179 EMILIN1Q9Y6C2 1016 aa12.27□□□□□ -0.45
LDHA-220ENST00000542179 PXDNQ92626 1479 aa12.27□□□□□ -0.45
LDHA-220ENST00000542179 ALS2Q96Q42 1657 aa12.26□□□□□ -0.45
LDHA-220ENST00000542179 RRS1Q15050 365 aaKnown RBP12.26□□□□□ -0.45
LDHA-220ENST00000542179 NGEFQ8N5V2 710 aa12.26□□□□□ -0.45
LDHA-220ENST00000542179 KCNH5Q8NCM2 988 aa12.26□□□□□ -0.45
LDHA-220ENST00000542179 SLIT3O75094 1523 aa12.26□□□□□ -0.45
LDHA-220ENST00000542179 IL13P35225 146 aa12.25□□□□□ -0.45
LDHA-220ENST00000542179 MAMSTRQ6ZN01 415 aa12.25□□□□□ -0.45
LDHA-220ENST00000542179 USP19O94966 1318 aa12.25□□□□□ -0.45
LDHA-220ENST00000542179 MAP3K19Q56UN5 1328 aa12.25□□□□□ -0.45
LDHA-220ENST00000542179 PPM1GO15355 546 aaPredicted RBP12.24□□□□□ -0.45
LDHA-220ENST00000542179 U2AF1L5P0DN76 240 aaPredicted RBP12.24□□□□□ -0.45
LDHA-220ENST00000542179 U2AF1Q01081 240 aaKnown RBP eCLIP12.24□□□□□ -0.45
LDHA-220ENST00000542179 XPCQ01831 940 aaPredicted RBP12.24□□□□□ -0.45
LDHA-220ENST00000542179 SOS2Q07890 1332 aaPredicted RBP12.24□□□□□ -0.45
LDHA-220ENST00000542179 RUNDC1Q96C34 613 aa12.24□□□□□ -0.45
LDHA-220ENST00000542179 PNNQ9H307 717 aaKnown RBP12.24□□□□□ -0.45
LDHA-220ENST00000542179 PEAK1Q9H792 1746 aa12.24□□□□□ -0.45
LDHA-220ENST00000542179 NFAT5O94916 1531 aa12.23□□□□□ -0.45
LDHA-220ENST00000542179 TNS3Q68CZ2 1445 aa12.23□□□□□ -0.45
LDHA-220ENST00000542179 FLT4P35916 1363 aa12.23□□□□□ -0.45
LDHA-220ENST00000542179 SPATA31A3Q5VYP0 1347 aa12.23□□□□□ -0.45
LDHA-220ENST00000542179 FCHSD2O94868 740 aa12.23□□□□□ -0.45
LDHA-220ENST00000542179 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
LDHA-220ENST00000542179 NUTM2GQ5VZR2 741 aa12.23□□□□□ -0.45
LDHA-220ENST00000542179 PHRF1Q9P1Y6 1649 aaKnown RBP12.22□□□□□ -0.45
LDHA-220ENST00000542179 RTL1A6NKG5 1358 aa12.22□□□□□ -0.45
LDHA-220ENST00000542179 ARHGEF10O15013 1369 aa12.22□□□□□ -0.45
LDHA-220ENST00000542179 OTUD5Q96G74 571 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms