RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 MCCP23508 829 aa5.63□□□□□ -1.51
SNHG1-219ENST00000542112 SLC20A2Q08357 652 aa5.63□□□□□ -1.51
SNHG1-219ENST00000542112 VAC14Q08AM6 782 aa5.63□□□□□ -1.51
SNHG1-219ENST00000542112 MSS51Q4VC12 460 aa5.63□□□□□ -1.51
SNHG1-219ENST00000542112 THSD4Q6ZMP0 1018 aa5.63□□□□□ -1.51
SNHG1-219ENST00000542112 TICAM2Q86XR7 235 aa5.63□□□□□ -1.51
SNHG1-219ENST00000542112 ZNF622Q969S3 477 aaKnown RBP eCLIP5.63□□□□□ -1.51
SNHG1-219ENST00000542112 WBP1LQ9NX94 342 aa5.63□□□□□ -1.51
SNHG1-219ENST00000542112 ZC3H4Q9UPT8 1303 aaKnown RBP5.63□□□□□ -1.51
SNHG1-219ENST00000542112 MMP14P50281 582 aa5.62□□□□□ -1.51
SNHG1-219ENST00000542112 CCDC9Q9Y3X0 531 aaKnown RBP5.62□□□□□ -1.51
SNHG1-219ENST00000542112 F12P00748 615 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-219ENST00000542112 EIF4G2P78344 907 aaKnown RBP eCLIP5.61□□□□□ -1.51
SNHG1-219ENST00000542112 SETQ01105 290 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-219ENST00000542112 SEMA3FQ13275 785 aa5.61□□□□□ -1.51
SNHG1-219ENST00000542112 CEP120Q8N960 986 aa5.61□□□□□ -1.51
SNHG1-219ENST00000542112 ARMC2Q8NEN0 867 aa5.61□□□□□ -1.51
SNHG1-219ENST00000542112 ADAMTS19Q8TE59 1207 aa5.61□□□□□ -1.51
SNHG1-219ENST00000542112 SPSB2Q99619 263 aa5.61□□□□□ -1.51
SNHG1-219ENST00000542112 KRTAP3-3Q9BYR6 98 aa5.61□□□□□ -1.51
SNHG1-219ENST00000542112 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
SNHG1-219ENST00000542112 CHMP4BQ9H444 224 aaKnown RBP5.61□□□□□ -1.51
SNHG1-219ENST00000542112 ALG2Q9H553 416 aa5.61□□□□□ -1.51
SNHG1-219ENST00000542112 FKBPLQ9UIM3 349 aa5.61□□□□□ -1.51
SNHG1-219ENST00000542112 BRPF3Q9ULD4 1205 aa5.61□□□□□ -1.51
SNHG1-219ENST00000542112 DXOO77932 396 aaKnown RBP5.6□□□□□ -1.51
SNHG1-219ENST00000542112 CCNYL3P0C7X3 344 aa5.6□□□□□ -1.51
SNHG1-219ENST00000542112 MMP16P51512 607 aa5.6□□□□□ -1.51
SNHG1-219ENST00000542112 NR1H3Q13133 447 aa5.6□□□□□ -1.51
SNHG1-219ENST00000542112 KCTD12Q96CX2 325 aaKnown RBP5.6□□□□□ -1.51
SNHG1-219ENST00000542112 POLR3GLQ9BT43 218 aa5.6□□□□□ -1.51
SNHG1-219ENST00000542112 ZBBXA8MT70 800 aa5.59□□□□□ -1.51
SNHG1-219ENST00000542112 COPS2P61201 443 aa5.59□□□□□ -1.51
SNHG1-219ENST00000542112 ZNF592Q92610 1267 aa5.59□□□□□ -1.51
SNHG1-219ENST00000542112 GPKOWQ92917 476 aaPredicted RBP eCLIP5.59□□□□□ -1.512e-31■■■□□ 17.2
SNHG1-219ENST00000542112 GTPBP4Q9BZE4 634 aaKnown RBP5.59□□□□□ -1.51
SNHG1-219ENST00000542112 LETM1O95202 739 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-219ENST00000542112 ADH1BP00325 375 aa5.58□□□□□ -1.52
SNHG1-219ENST00000542112 CTHP32929 405 aa5.58□□□□□ -1.52
SNHG1-219ENST00000542112 IRX3P78415 501 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-219ENST00000542112 KCNH2Q12809 1159 aa5.58□□□□□ -1.52
SNHG1-219ENST00000542112 FAM160A2Q8N612 972 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-219ENST00000542112 SECISBP2LQ93073 1101 aaKnown RBP5.58□□□□□ -1.52
SNHG1-219ENST00000542112 PBXIP1Q96AQ6 731 aa5.58□□□□□ -1.52
SNHG1-219ENST00000542112 TRAIPQ9BWF2 469 aa5.58□□□□□ -1.52
SNHG1-219ENST00000542112 PPP1R12CQ9BZL4 782 aa5.58□□□□□ -1.52
SNHG1-219ENST00000542112 EVA1BQ9NVM1 165 aa5.58□□□□□ -1.52
SNHG1-219ENST00000542112 ISY1Q9ULR0 285 aaKnown RBP5.58□□□□□ -1.52
SNHG1-219ENST00000542112 GPSM3Q9Y4H4 160 aa5.58□□□□□ -1.52
SNHG1-219ENST00000542112 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-219ENST00000542112 ZPR1O75312 459 aa5.57□□□□□ -1.52
SNHG1-219ENST00000542112 NBPF14Q5TI25 921 aa5.57□□□□□ -1.52
SNHG1-219ENST00000542112 RGS22Q8NE09 1264 aa5.57□□□□□ -1.52
SNHG1-219ENST00000542112 PUS7Q96PZ0 661 aaKnown RBP5.57□□□□□ -1.52
SNHG1-219ENST00000542112 NUDT12Q9BQG2 462 aa5.57□□□□□ -1.52
SNHG1-219ENST00000542112 MAP10Q9P2G4 905 aa5.57□□□□□ -1.52
SNHG1-219ENST00000542112 ABCC8Q09428 1581 aa5.56□□□□□ -1.52
SNHG1-219ENST00000542112 PALM3A6NDB9 673 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-219ENST00000542112 FBXO45P0C2W1 286 aa5.56□□□□□ -1.52
SNHG1-219ENST00000542112 RGS3P49796 1198 aa5.56□□□□□ -1.52
SNHG1-219ENST00000542112 MCCD1P59942 119 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-219ENST00000542112 PTK2Q05397 1052 aa5.56□□□□□ -1.52
SNHG1-219ENST00000542112 DMTNQ08495 405 aa5.56□□□□□ -1.52
SNHG1-219ENST00000542112 CFAP70Q5T0N1 1121 aa5.56□□□□□ -1.52
SNHG1-219ENST00000542112 PDXDC2PQ6P474 469 aa5.56□□□□□ -1.52
SNHG1-219ENST00000542112 MTRQ99707 1265 aa5.56□□□□□ -1.52
SNHG1-219ENST00000542112 PLCD4Q9BRC7 762 aa5.56□□□□□ -1.52
SNHG1-219ENST00000542112 YY1AP1Q9H869 796 aa5.56□□□□□ -1.52
SNHG1-219ENST00000542112 IL21Q9HBE4 155 aa5.56□□□□□ -1.52
SNHG1-219ENST00000542112 ZBTB7CA1YPR0 619 aa5.55□□□□□ -1.52
SNHG1-219ENST00000542112 RETREG2Q8NC44 543 aa5.55□□□□□ -1.52
SNHG1-219ENST00000542112 NFATC2IPQ8NCF5 419 aa5.55□□□□□ -1.52
SNHG1-219ENST00000542112 UCN2Q96RP3 112 aa5.55□□□□□ -1.52
SNHG1-219ENST00000542112 TSPYL1Q9H0U9 437 aa5.55□□□□□ -1.52
SNHG1-219ENST00000542112 TMEM51Q9NW97 253 aa5.55□□□□□ -1.52
SNHG1-219ENST00000542112 BIVM-ERCC5R4GMW8 1640 aa5.55□□□□□ -1.52
SNHG1-219ENST00000542112 CFTRP13569 1480 aa5.54□□□□□ -1.52
SNHG1-219ENST00000542112 TCERG1O14776 1098 aaKnown RBP5.54□□□□□ -1.52
SNHG1-219ENST00000542112 ATP9BO43861 1147 aa5.54□□□□□ -1.52
SNHG1-219ENST00000542112 RFX1P22670 979 aa5.54□□□□□ -1.52
SNHG1-219ENST00000542112 LMOD1P29536 600 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-219ENST00000542112 ITGAEP38570 1179 aa5.54□□□□□ -1.52
SNHG1-219ENST00000542112 TJAP1Q5JTD0 557 aa5.54□□□□□ -1.52
SNHG1-219ENST00000542112 KCTD17Q8N5Z5 321 aa5.54□□□□□ -1.52
SNHG1-219ENST00000542112 SLC6A16Q9GZN6 736 aa5.54□□□□□ -1.52
SNHG1-219ENST00000542112 PRDM9Q9NQV7 894 aa5.54□□□□□ -1.52
SNHG1-219ENST00000542112 TFIP11Q9UBB9 837 aaKnown RBP5.54□□□□□ -1.52
SNHG1-219ENST00000542112 SYNJ1O43426 1573 aa5.54□□□□□ -1.52
SNHG1-219ENST00000542112 POTEMA6NI47 508 aa5.53□□□□□ -1.52
SNHG1-219ENST00000542112 TLL1O43897 1013 aa5.53□□□□□ -1.52
SNHG1-219ENST00000542112 PTPN5P54829 565 aa5.53□□□□□ -1.52
SNHG1-219ENST00000542112 FAM193AP78312 1265 aa5.53□□□□□ -1.52
SNHG1-219ENST00000542112 SRPK2P78362 688 aaKnown RBP5.53□□□□□ -1.52
SNHG1-219ENST00000542112 CDAN1Q8IWY9 1227 aa5.53□□□□□ -1.52
SNHG1-219ENST00000542112 DNAJC2Q99543 621 aaKnown RBP5.53□□□□□ -1.52
SNHG1-219ENST00000542112 MAFBQ9Y5Q3 323 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-219ENST00000542112 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-219ENST00000542112 CSB-PGBD3P0DP91 1061 aa5.52□□□□□ -1.53
SNHG1-219ENST00000542112 CNPY4Q8N129 248 aa5.52□□□□□ -1.53
SNHG1-219ENST00000542112 FRAT1Q92837 279 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms