RNA–Protein interactions for RNA: ENST00000541645.1

UBC-210, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-210ENST00000541645 ZBTB7CA1YPR0 619 aa24.64■■□□□ 1.54
UBC-210ENST00000541645 SOCS7O14512 581 aa24.64■■□□□ 1.54
UBC-210ENST00000541645 STRN4Q9NRL3 753 aa24.64■■□□□ 1.54
UBC-210ENST00000541645 COL5A2P05997 1499 aaPredicted RBP24.64■■□□□ 1.53
UBC-210ENST00000541645 GLI3P10071 1580 aa24.63■■□□□ 1.53
UBC-210ENST00000541645 SPATA31A1Q5TZJ5 1347 aa24.62■■□□□ 1.53
UBC-210ENST00000541645 COL18A1P39060 1754 aa24.61■■□□□ 1.53
UBC-210ENST00000541645 NSD2O96028 1365 aa24.6■■□□□ 1.53
UBC-210ENST00000541645 LARP1Q6PKG0 1096 aaKnown RBP24.6■■□□□ 1.53
UBC-210ENST00000541645 KNSTRNQ9Y448 316 aa24.6■■□□□ 1.53
UBC-210ENST00000541645 MAP3K19Q56UN5 1328 aa24.59■■□□□ 1.53
UBC-210ENST00000541645 WDR17Q8IZU2 1322 aa24.59■■□□□ 1.53
UBC-210ENST00000541645 IP6K1Q92551 441 aa24.58■■□□□ 1.53
UBC-210ENST00000541645 THRAP3Q9Y2W1 955 aaKnown RBP24.58■■□□□ 1.53
UBC-210ENST00000541645 PER1O15534 1290 aaPredicted RBP24.57■■□□□ 1.52
UBC-210ENST00000541645 CRB1P82279 1406 aa24.57■■□□□ 1.52
UBC-210ENST00000541645 BLMP54132 1417 aaPredicted RBP24.56■■□□□ 1.52
UBC-210ENST00000541645 BARGINQ6ZT62 677 aa24.56■■□□□ 1.52
UBC-210ENST00000541645 SEPT12Q8IYM1 358 aa24.56■■□□□ 1.52
UBC-210ENST00000541645 KIF20BQ96Q89 1820 aa24.56■■□□□ 1.52
UBC-210ENST00000541645 KIF24Q5T7B8 1368 aa24.55■■□□□ 1.52
UBC-210ENST00000541645 FBLN1P23142 703 aa24.55■■□□□ 1.52
UBC-210ENST00000541645 FAM98CQ17RN3 349 aaKnown RBP24.55■■□□□ 1.52
UBC-210ENST00000541645 TCP11L2Q8N4U5 519 aa24.55■■□□□ 1.52
UBC-210ENST00000541645 RTL1A6NKG5 1358 aa24.54■■□□□ 1.52
UBC-210ENST00000541645 ERBB3P21860 1342 aa24.54■■□□□ 1.52
UBC-210ENST00000541645 AMPHP49418 695 aa24.53■■□□□ 1.52
UBC-210ENST00000541645 RRS1Q15050 365 aaKnown RBP24.53■■□□□ 1.52
UBC-210ENST00000541645 AMER1Q5JTC6 1135 aaPredicted RBP24.53■■□□□ 1.52
UBC-210ENST00000541645 TOM1L2Q6ZVM7 507 aa24.53■■□□□ 1.52
UBC-210ENST00000541645 HOXC9P31274 260 aa24.52■■□□□ 1.52
UBC-210ENST00000541645 CARD10Q9BWT7 1032 aa24.52■■□□□ 1.52
UBC-210ENST00000541645 CSB-PGBD3P0DP91 1061 aa24.51■■□□□ 1.51
UBC-210ENST00000541645 USP35Q9P2H5 1018 aa24.51■■□□□ 1.51
UBC-210ENST00000541645 ANKRD24Q8TF21 1146 aa24.5■■□□□ 1.51
UBC-210ENST00000541645 NPC1L1Q9UHC9 1359 aa24.49■■□□□ 1.51
UBC-210ENST00000541645 LTN1O94822 1766 aa24.49■■□□□ 1.51
UBC-210ENST00000541645 FLT4P35916 1363 aa24.47■■□□□ 1.51
UBC-210ENST00000541645 MORC1Q86VD1 984 aa24.47■■□□□ 1.51
UBC-210ENST00000541645 INSRP06213 1382 aa24.46■■□□□ 1.51
UBC-210ENST00000541645 A0A0G2JS52 829 aa24.46■■□□□ 1.51
UBC-210ENST00000541645 MYT1Q01538 1121 aa24.46■■□□□ 1.51
UBC-210ENST00000541645 KRT27Q7Z3Y8 459 aa24.46■■□□□ 1.51
UBC-210ENST00000541645 CDCA7Q9BWT1 371 aaPredicted RBP24.46■■□□□ 1.51
UBC-210ENST00000541645 POLKQ9UBT6 870 aa24.46■■□□□ 1.51
UBC-210ENST00000541645 THSD7AQ9UPZ6 1657 aa24.46■■□□□ 1.51
UBC-210ENST00000541645 EMILIN1Q9Y6C2 1016 aa24.45■■□□□ 1.5
UBC-210ENST00000541645 NLRP2Q9NX02 1062 aa24.44■■□□□ 1.5
UBC-210ENST00000541645 ANKRD26Q9UPS8 1709 aa24.44■■□□□ 1.5
UBC-210ENST00000541645 HSP90AB2PQ58FF8 381 aa24.43■■□□□ 1.5
UBC-210ENST00000541645 TNNT2P45379 298 aaPredicted RBP24.42■■□□□ 1.5
UBC-210ENST00000541645 RGPD5Q99666 1765 aa24.42■■□□□ 1.5
UBC-210ENST00000541645 UPF1Q92900 1129 aaKnown RBP eCLIP24.4■■□□□ 1.5
UBC-210ENST00000541645 LTV1Q96GA3 475 aaPredicted RBP24.4■■□□□ 1.5
UBC-210ENST00000541645 DISP2A7MBM2 1401 aa24.4■■□□□ 1.5
UBC-210ENST00000541645 SMG6Q86US8 1419 aaKnown RBP24.4■■□□□ 1.5
UBC-210ENST00000541645 PEAK1Q9H792 1746 aa24.38■■□□□ 1.49
UBC-210ENST00000541645 PPM1GO15355 546 aaPredicted RBP24.38■■□□□ 1.49
UBC-210ENST00000541645 PDE3BQ13370 1112 aa24.37■■□□□ 1.49
UBC-210ENST00000541645 CC2D1BQ5T0F9 858 aaKnown RBP24.37■■□□□ 1.49
UBC-210ENST00000541645 FAM208AQ9UK61 1670 aaKnown RBP24.35■■□□□ 1.49
UBC-210ENST00000541645 IL2RBP14784 551 aa24.35■■□□□ 1.49
UBC-210ENST00000541645 DDB1Q16531 1140 aa24.35■■□□□ 1.49
UBC-210ENST00000541645 CCDC125Q86Z20 511 aa24.35■■□□□ 1.49
UBC-210ENST00000541645 NBPF6Q5VWK0 638 aa24.34■■□□□ 1.49
UBC-210ENST00000541645 NBPF4Q96M43 638 aa24.34■■□□□ 1.49
UBC-210ENST00000541645 BRWD3Q6RI45 1802 aa24.33■■□□□ 1.49
UBC-210ENST00000541645 PARP4Q9UKK3 1724 aaKnown RBP24.33■■□□□ 1.49
UBC-210ENST00000541645 EXOC5O00471 708 aa24.32■■□□□ 1.48
UBC-210ENST00000541645 FAM196AQ6ZSG2 479 aa24.32■■□□□ 1.48
UBC-210ENST00000541645 MAP2P11137 1827 aaKnown RBP24.3■■□□□ 1.48
UBC-210ENST00000541645 EIF4A2Q14240 407 aaKnown RBP24.29■■□□□ 1.48
UBC-210ENST00000541645 NCAPD2Q15021 1401 aa24.28■■□□□ 1.48
UBC-210ENST00000541645 LRRC37A3O60309 1634 aa24.28■■□□□ 1.48
UBC-210ENST00000541645 TNS2Q63HR2 1409 aa24.27■■□□□ 1.48
UBC-210ENST00000541645 EP400Q96L91 3159 aa24.27■■□□□ 1.48
UBC-210ENST00000541645 MTHFSP49914 203 aa24.27■■□□□ 1.48
UBC-210ENST00000541645 FAM182BQ5T319 152 aa24.27■■□□□ 1.48
UBC-210ENST00000541645 WNK3Q9BYP7 1800 aa24.26■■□□□ 1.47
UBC-210ENST00000541645 DDX10Q13206 875 aaKnown RBP24.26■■□□□ 1.47
UBC-210ENST00000541645 EYA1Q99502 592 aa24.26■■□□□ 1.47
UBC-210ENST00000541645 BCL9O00512 1426 aa24.26■■□□□ 1.47
UBC-210ENST00000541645 MARCH10Q8NA82 808 aaPredicted RBP24.25■■□□□ 1.47
UBC-210ENST00000541645 OVOS2A0A0G2JMS6 1433 aa24.25■■□□□ 1.47
UBC-210ENST00000541645 USHBP1Q8N6Y0 703 aa24.24■■□□□ 1.47
UBC-210ENST00000541645 RAPGEF4Q8WZA2 1011 aa24.24■■□□□ 1.47
UBC-210ENST00000541645 IGSF1Q8N6C5 1336 aa24.22■■□□□ 1.47
UBC-210ENST00000541645 CNGB1Q14028 1251 aaPredicted RBP24.22■■□□□ 1.47
UBC-210ENST00000541645 MEGF6O75095 1541 aa24.21■■□□□ 1.47
UBC-210ENST00000541645 TATP17735 454 aaPredicted RBP24.21■■□□□ 1.47
UBC-210ENST00000541645 IL13P35225 146 aa24.21■■□□□ 1.47
UBC-210ENST00000541645 PLEKHG2Q9H7P9 1386 aa24.2■■□□□ 1.46
UBC-210ENST00000541645 ZNF316A6NFI3 1004 aaPredicted RBP24.2■■□□□ 1.46
UBC-210ENST00000541645 SF3B2Q13435 895 aaKnown RBP24.2■■□□□ 1.46
UBC-210ENST00000541645 ZCRB1Q8TBF4 217 aaKnown RBP24.2■■□□□ 1.46
UBC-210ENST00000541645 PARD3Q8TEW0 1356 aa24.18■■□□□ 1.46
UBC-210ENST00000541645 PPP2R1AP30153 589 aa24.18■■□□□ 1.46
UBC-210ENST00000541645 RGPD2P0DJD1 1756 aa24.18■■□□□ 1.46
UBC-210ENST00000541645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.17■■□□□ 1.46
UBC-210ENST00000541645 TRIM37O94972 964 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms