RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 KCNH5Q8NCM2 988 aa28.25■■■□□ 2.11
ATN1-204ENST00000541029 USP31Q70CQ4 1352 aa28.24■■■□□ 2.11
ATN1-204ENST00000541029 NME9Q86XW9 330 aa28.24■■■□□ 2.11
ATN1-204ENST00000541029 PUS7Q96PZ0 661 aaKnown RBP28.24■■■□□ 2.11
ATN1-204ENST00000541029 CLSPNQ9HAW4 1339 aa28.23■■■□□ 2.11
ATN1-204ENST00000541029 ARHGEF25Q86VW2 580 aa28.23■■■□□ 2.11
ATN1-204ENST00000541029 AXIN2Q9Y2T1 843 aa28.22■■■□□ 2.11
ATN1-204ENST00000541029 NINLQ9Y2I6 1382 aa28.22■■■□□ 2.11
ATN1-204ENST00000541029 TERF2IPQ9NYB0 399 aa28.21■■■□□ 2.11
ATN1-204ENST00000541029 THRAP3Q9Y2W1 955 aaKnown RBP28.2■■■□□ 2.1
ATN1-204ENST00000541029 OVOS2A0A0J9YW53 1432 aa28.19■■■□□ 2.1
ATN1-204ENST00000541029 OVOS2Q6IE36 1432 aa28.19■■■□□ 2.1
ATN1-204ENST00000541029 WDR17Q8IZU2 1322 aa28.18■■■□□ 2.1
ATN1-204ENST00000541029 MYOM1P52179 1685 aa28.18■■■□□ 2.1
ATN1-204ENST00000541029 PEAK1Q9H792 1746 aa28.18■■■□□ 2.1
ATN1-204ENST00000541029 BAG6P46379 1132 aa28.17■■■□□ 2.1
ATN1-204ENST00000541029 TOM1L2Q6ZVM7 507 aa28.17■■■□□ 2.1
ATN1-204ENST00000541029 TIMELESSQ9UNS1 1208 aa28.16■■■□□ 2.1
ATN1-204ENST00000541029 SRCAPQ6ZRS2 3230 aa28.16■■■□□ 2.1
ATN1-204ENST00000541029 SBF2Q86WG5 1849 aa28.15■■■□□ 2.1
ATN1-204ENST00000541029 SLC24A1O60721 1099 aa28.15■■■□□ 2.1
ATN1-204ENST00000541029 PDE3BQ13370 1112 aa28.15■■■□□ 2.1
ATN1-204ENST00000541029 KIF20BQ96Q89 1820 aa28.14■■■□□ 2.1
ATN1-204ENST00000541029 FAM196AQ6ZSG2 479 aa28.14■■■□□ 2.1
ATN1-204ENST00000541029 DISP2A7MBM2 1401 aa28.14■■■□□ 2.1
ATN1-204ENST00000541029 TMF1P82094 1093 aa28.13■■■□□ 2.09
ATN1-204ENST00000541029 ANKRD36BQ8N2N9 1353 aa28.12■■■□□ 2.09
ATN1-204ENST00000541029 TRIM37O94972 964 aa28.11■■■□□ 2.09
ATN1-204ENST00000541029 RREB1Q92766 1687 aa28.1■■■□□ 2.09
ATN1-204ENST00000541029 CSB-PGBD3P0DP91 1061 aa28.1■■■□□ 2.09
ATN1-204ENST00000541029 EN1Q05925 392 aaPredicted RBP28.1■■■□□ 2.09
ATN1-204ENST00000541029 FAM208AQ9UK61 1670 aaKnown RBP28.08■■■□□ 2.09
ATN1-204ENST00000541029 OVOS2A0A0G2JMS6 1433 aa28.08■■■□□ 2.09
ATN1-204ENST00000541029 NUP188Q5SRE5 1749 aa28.06■■■□□ 2.08
ATN1-204ENST00000541029 CARD10Q9BWT7 1032 aa28.06■■■□□ 2.08
ATN1-204ENST00000541029 ERBB3P21860 1342 aa28.05■■■□□ 2.08
ATN1-204ENST00000541029 CCER1Q8TC90 406 aaPredicted RBP28.05■■■□□ 2.08
ATN1-204ENST00000541029 CCDC7Q96M83 1385 aa28.04■■■□□ 2.08
ATN1-204ENST00000541029 DDB1Q16531 1140 aa28.04■■■□□ 2.08
ATN1-204ENST00000541029 RGPD3A6NKT7 1758 aaPredicted RBP28.01■■■□□ 2.08
ATN1-204ENST00000541029 RGPD2P0DJD1 1756 aa28.01■■■□□ 2.08
ATN1-204ENST00000541029 RGPD4Q7Z3J3 1758 aa28.01■■■□□ 2.08
ATN1-204ENST00000541029 EZH2Q15910 746 aaKnown RBP28.01■■■□□ 2.07
ATN1-204ENST00000541029 COG3Q96JB2 828 aa28.01■■■□□ 2.07
ATN1-204ENST00000541029 CDCA7Q9BWT1 371 aaPredicted RBP28.01■■■□□ 2.07
ATN1-204ENST00000541029 TNS2Q63HR2 1409 aa28.01■■■□□ 2.07
ATN1-204ENST00000541029 APBA3O96018 575 aa28■■■□□ 2.07
ATN1-204ENST00000541029 CDCA8Q53HL2 280 aa28■■■□□ 2.07
ATN1-204ENST00000541029 ANKRD24Q8TF21 1146 aa27.98■■■□□ 2.07
ATN1-204ENST00000541029 CAMKK2Q96RR4 588 aa27.98■■■□□ 2.07
ATN1-204ENST00000541029 PARD3Q8TEW0 1356 aa27.98■■■□□ 2.07
ATN1-204ENST00000541029 LRP5O75197 1615 aa27.97■■■□□ 2.07
ATN1-204ENST00000541029 PSDA5PKW4 1024 aaPredicted RBP27.97■■■□□ 2.07
ATN1-204ENST00000541029 NLRP2Q9NX02 1062 aa27.97■■■□□ 2.07
ATN1-204ENST00000541029 MARCH10Q8NA82 808 aaPredicted RBP27.95■■■□□ 2.06
ATN1-204ENST00000541029 MAP3K19Q56UN5 1328 aa27.94■■■□□ 2.06
ATN1-204ENST00000541029 C11orf95C9JLR9 678 aaPredicted RBP27.94■■■□□ 2.06
ATN1-204ENST00000541029 FBLN1P23142 703 aa27.93■■■□□ 2.06
ATN1-204ENST00000541029 IP6K1Q92551 441 aa27.93■■■□□ 2.06
ATN1-204ENST00000541029 GGNBP2Q9H3C7 697 aa27.93■■■□□ 2.06
ATN1-204ENST00000541029 NHSQ6T4R5 1651 aa27.93■■■□□ 2.06
ATN1-204ENST00000541029 NSD3Q9BZ95 1437 aa27.92■■■□□ 2.06
ATN1-204ENST00000541029 FYB1O15117 783 aa27.92■■■□□ 2.06
ATN1-204ENST00000541029 BCL9O00512 1426 aa27.92■■■□□ 2.06
ATN1-204ENST00000541029 LTV1Q96GA3 475 aaPredicted RBP27.9■■■□□ 2.06
ATN1-204ENST00000541029 RTL1A6NKG5 1358 aa27.89■■■□□ 2.06
ATN1-204ENST00000541029 EXOC5O00471 708 aa27.89■■■□□ 2.06
ATN1-204ENST00000541029 HOXC9P31274 260 aa27.89■■■□□ 2.06
ATN1-204ENST00000541029 R3HDM1Q15032 1099 aaKnown RBP27.88■■■□□ 2.05
ATN1-204ENST00000541029 SHANK3Q9BYB0 1731 aa27.88■■■□□ 2.05
ATN1-204ENST00000541029 ANKRD26Q9UPS8 1709 aa27.88■■■□□ 2.05
ATN1-204ENST00000541029 IL2RBP14784 551 aa27.87■■■□□ 2.05
ATN1-204ENST00000541029 AMPHP49418 695 aa27.87■■■□□ 2.05
ATN1-204ENST00000541029 RRS1Q15050 365 aaKnown RBP27.87■■■□□ 2.05
ATN1-204ENST00000541029 PTF1AQ7RTS3 328 aa27.87■■■□□ 2.05
ATN1-204ENST00000541029 CARD14Q9BXL6 1004 aa27.87■■■□□ 2.05
ATN1-204ENST00000541029 KAT6BQ8WYB5 2073 aa27.87■■■□□ 2.05
ATN1-204ENST00000541029 HSPA5P11021 654 aaKnown RBP27.85■■■□□ 2.05
ATN1-204ENST00000541029 EIF4G2P78344 907 aaKnown RBP eCLIP27.84■■■□□ 2.05
ATN1-204ENST00000541029 POLR3GLQ9BT43 218 aa27.84■■■□□ 2.05
ATN1-204ENST00000541029 BCL11BQ9C0K0 894 aaPredicted RBP27.84■■■□□ 2.05
ATN1-204ENST00000541029 BTAF1O14981 1849 aa27.83■■■□□ 2.05
ATN1-204ENST00000541029 MAP2P11137 1827 aaKnown RBP27.82■■■□□ 2.04
ATN1-204ENST00000541029 DOT1LQ8TEK3 1739 aa27.8■■■□□ 2.04
ATN1-204ENST00000541029 MEGF6O75095 1541 aa27.79■■■□□ 2.04
ATN1-204ENST00000541029 SMG6Q86US8 1419 aaKnown RBP27.78■■■□□ 2.04
ATN1-204ENST00000541029 FLT4P35916 1363 aa27.77■■■□□ 2.04
ATN1-204ENST00000541029 PLSCR1O15162 318 aa27.77■■■□□ 2.04
ATN1-204ENST00000541029 KCNQ2O43526 872 aa27.75■■■□□ 2.03
ATN1-204ENST00000541029 ACSBG1Q96GR2 724 aa27.75■■■□□ 2.03
ATN1-204ENST00000541029 INSRP06213 1382 aa27.74■■■□□ 2.03
ATN1-204ENST00000541029 KIF24Q5T7B8 1368 aa27.74■■■□□ 2.03
ATN1-204ENST00000541029 CGNL1Q0VF96 1302 aa27.74■■■□□ 2.03
ATN1-204ENST00000541029 NBPF14Q5TI25 921 aa27.74■■■□□ 2.03
ATN1-204ENST00000541029 HSP90AB2PQ58FF8 381 aa27.72■■■□□ 2.03
ATN1-204ENST00000541029 USHBP1Q8N6Y0 703 aa27.72■■■□□ 2.03
ATN1-204ENST00000541029 EMILIN1Q9Y6C2 1016 aa27.72■■■□□ 2.03
ATN1-204ENST00000541029 CASZ1Q86V15 1759 aa27.72■■■□□ 2.03
ATN1-204ENST00000541029 NBPF6Q5VWK0 638 aa27.71■■■□□ 2.03
ATN1-204ENST00000541029 NBPF4Q96M43 638 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms