RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 RGPD2P0DJD1 1756 aa16.6■□□□□ 0.25
SMAD3-204ENST00000540846 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
SMAD3-204ENST00000540846 SUPT16HQ9Y5B9 1047 aaKnown RBP16.6■□□□□ 0.25
SMAD3-204ENST00000540846 CAMTA1Q9Y6Y1 1673 aa16.59■□□□□ 0.25
SMAD3-204ENST00000540846 JCADQ9P266 1359 aa16.59■□□□□ 0.25
SMAD3-204ENST00000540846 HOXC9P31274 260 aa16.59■□□□□ 0.25
SMAD3-204ENST00000540846 ZC3H6P61129 1189 aaKnown RBP16.58■□□□□ 0.24
SMAD3-204ENST00000540846 WDR43Q15061 677 aaKnown RBP eCLIP16.58■□□□□ 0.24
SMAD3-204ENST00000540846 HSP90AB2PQ58FF8 381 aa16.58■□□□□ 0.24
SMAD3-204ENST00000540846 COL14A1Q05707 1796 aaKnown RBP16.58■□□□□ 0.24
SMAD3-204ENST00000540846 PLCH1Q4KWH8 1693 aa16.58■□□□□ 0.24
SMAD3-204ENST00000540846 PPM1GO15355 546 aaPredicted RBP16.57■□□□□ 0.24
SMAD3-204ENST00000540846 IP6K1Q92551 441 aa16.57■□□□□ 0.24
SMAD3-204ENST00000540846 FAM208AQ9UK61 1670 aaKnown RBP16.56■□□□□ 0.24
SMAD3-204ENST00000540846 CFAP53Q96M91 514 aa16.56■□□□□ 0.24
SMAD3-204ENST00000540846 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
SMAD3-204ENST00000540846 LRP6O75581 1613 aa16.56■□□□□ 0.24
SMAD3-204ENST00000540846 NEFLP07196 543 aa16.55■□□□□ 0.24
SMAD3-204ENST00000540846 IL13P35225 146 aa16.55■□□□□ 0.24
SMAD3-204ENST00000540846 AMPHP49418 695 aa16.55■□□□□ 0.24
SMAD3-204ENST00000540846 AXIN2Q9Y2T1 843 aa16.55■□□□□ 0.24
SMAD3-204ENST00000540846 EIF4A2Q14240 407 aaKnown RBP16.55■□□□□ 0.24
SMAD3-204ENST00000540846 NUDCQ9Y266 331 aa16.55■□□□□ 0.24
SMAD3-204ENST00000540846 NRAPQ86VF7 1730 aa16.54■□□□□ 0.24
SMAD3-204ENST00000540846 DIAPH1O60610 1272 aaKnown RBP16.54■□□□□ 0.24
SMAD3-204ENST00000540846 NCAPD2Q15021 1401 aa16.53■□□□□ 0.24
SMAD3-204ENST00000540846 NWD2Q9ULI1 1742 aa16.53■□□□□ 0.24
SMAD3-204ENST00000540846 PDE3BQ13370 1112 aa16.52■□□□□ 0.24
SMAD3-204ENST00000540846 CHRNA2Q15822 529 aa16.52■□□□□ 0.24
SMAD3-204ENST00000540846 COL5A2P05997 1499 aaPredicted RBP16.52■□□□□ 0.24
SMAD3-204ENST00000540846 FKBP8Q14318 412 aa16.51■□□□□ 0.23
SMAD3-204ENST00000540846 SPATA31A6Q5VVP1 1343 aa16.51■□□□□ 0.23
SMAD3-204ENST00000540846 PRDM11Q9NQV5 511 aa16.51■□□□□ 0.23
SMAD3-204ENST00000540846 ERBB3P21860 1342 aa16.51■□□□□ 0.23
SMAD3-204ENST00000540846 FAM83GA6ND36 823 aa16.51■□□□□ 0.23
SMAD3-204ENST00000540846 FBXO41Q8TF61 875 aa16.51■□□□□ 0.23
SMAD3-204ENST00000540846 IGSF1Q8N6C5 1336 aa16.5■□□□□ 0.23
SMAD3-204ENST00000540846 ZBTB7CA1YPR0 619 aa16.5■□□□□ 0.23
SMAD3-204ENST00000540846 HAP1P54257 671 aaPredicted RBP16.5■□□□□ 0.23
SMAD3-204ENST00000540846 KDRP35968 1356 aa16.49■□□□□ 0.23
SMAD3-204ENST00000540846 SENP3-EIF4A1A0A087X0R7 540 aa16.49■□□□□ 0.23
SMAD3-204ENST00000540846 SLIT2O94813 1529 aa16.49■□□□□ 0.23
SMAD3-204ENST00000540846 ANKRD24Q8TF21 1146 aa16.47■□□□□ 0.23
SMAD3-204ENST00000540846 EYA1Q99502 592 aa16.47■□□□□ 0.23
SMAD3-204ENST00000540846 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.47■□□□□ 0.23
SMAD3-204ENST00000540846 ZNF521Q96K83 1311 aa16.46■□□□□ 0.23
SMAD3-204ENST00000540846 NUTM2BA6NNL0 878 aaPredicted RBP16.46■□□□□ 0.23
SMAD3-204ENST00000540846 NUTM2EB1AL46 878 aaPredicted RBP16.46■□□□□ 0.23
SMAD3-204ENST00000540846 U2SURPO15042 1029 aaKnown RBP16.46■□□□□ 0.23
SMAD3-204ENST00000540846 U2AF1L5P0DN76 240 aaPredicted RBP16.46■□□□□ 0.23
SMAD3-204ENST00000540846 U2AF1Q01081 240 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMAD3-204ENST00000540846 NUTM2AQ8IVF1 878 aaPredicted RBP16.46■□□□□ 0.23
SMAD3-204ENST00000540846 RSPH6AQ9H0K4 717 aa16.46■□□□□ 0.23
SMAD3-204ENST00000540846 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
SMAD3-204ENST00000540846 ADAMTS2O95450 1211 aa16.45■□□□□ 0.22
SMAD3-204ENST00000540846 NBPF6Q5VWK0 638 aa16.45■□□□□ 0.22
SMAD3-204ENST00000540846 AEBP1Q8IUX7 1158 aa16.45■□□□□ 0.22
SMAD3-204ENST00000540846 NGEFQ8N5V2 710 aa16.45■□□□□ 0.22
SMAD3-204ENST00000540846 LTV1Q96GA3 475 aaPredicted RBP16.45■□□□□ 0.22
SMAD3-204ENST00000540846 NBPF4Q96M43 638 aa16.45■□□□□ 0.22
SMAD3-204ENST00000540846 WNK3Q9BYP7 1800 aa16.45■□□□□ 0.22
SMAD3-204ENST00000540846 PLEKHF1Q96S99 279 aa16.44■□□□□ 0.22
SMAD3-204ENST00000540846 WDR17Q8IZU2 1322 aa16.44■□□□□ 0.22
SMAD3-204ENST00000540846 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
SMAD3-204ENST00000540846 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
SMAD3-204ENST00000540846 FCHSD2O94868 740 aa16.43■□□□□ 0.22
SMAD3-204ENST00000540846 HMOX1P09601 288 aa16.43■□□□□ 0.22
SMAD3-204ENST00000540846 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
SMAD3-204ENST00000540846 BTG4Q9NY30 223 aa16.43■□□□□ 0.22
SMAD3-204ENST00000540846 BCL9LQ86UU0 1499 aa16.42■□□□□ 0.22
SMAD3-204ENST00000540846 SULT6B1Q6IMI4 303 aa16.42■□□□□ 0.22
SMAD3-204ENST00000540846 CCDC146Q8IYE0 955 aa16.42■□□□□ 0.22
SMAD3-204ENST00000540846 USHBP1Q8N6Y0 703 aa16.41■□□□□ 0.22
SMAD3-204ENST00000540846 PKD1L3Q7Z443 1732 aa16.41■□□□□ 0.22
SMAD3-204ENST00000540846 CRB1P82279 1406 aa16.41■□□□□ 0.22
SMAD3-204ENST00000540846 PRKAR2BP31323 418 aa16.4■□□□□ 0.22
SMAD3-204ENST00000540846 PARP4Q9UKK3 1724 aaKnown RBP16.4■□□□□ 0.22
SMAD3-204ENST00000540846 APAF1O14727 1248 aa16.39■□□□□ 0.21
SMAD3-204ENST00000540846 LARP1Q6PKG0 1096 aaKnown RBP16.39■□□□□ 0.21
SMAD3-204ENST00000540846 FNBP4Q8N3X1 1017 aaPredicted RBP16.39■□□□□ 0.21
SMAD3-204ENST00000540846 RUNDC1Q96C34 613 aa16.39■□□□□ 0.21
SMAD3-204ENST00000540846 CDCA7LQ96GN5 454 aa16.39■□□□□ 0.21
SMAD3-204ENST00000540846 SHANK3Q9BYB0 1731 aa16.39■□□□□ 0.21
SMAD3-204ENST00000540846 MEGF6O75095 1541 aa16.39■□□□□ 0.21
SMAD3-204ENST00000540846 PHACTR3Q96KR7 559 aa16.38■□□□□ 0.21
SMAD3-204ENST00000540846 C8orf37Q96NL8 207 aa16.37■□□□□ 0.21
SMAD3-204ENST00000540846 CARD10Q9BWT7 1032 aa16.37■□□□□ 0.21
SMAD3-204ENST00000540846 STRN4Q9NRL3 753 aa16.37■□□□□ 0.21
SMAD3-204ENST00000540846 NLRP2Q9NX02 1062 aa16.37■□□□□ 0.21
SMAD3-204ENST00000540846 PLEKHG2Q9H7P9 1386 aa16.36■□□□□ 0.21
SMAD3-204ENST00000540846 DISP2A7MBM2 1401 aa16.36■□□□□ 0.21
SMAD3-204ENST00000540846 CSB-PGBD3P0DP91 1061 aa16.36■□□□□ 0.21
SMAD3-204ENST00000540846 GOLGA2Q08379 1002 aa16.36■□□□□ 0.21
SMAD3-204ENST00000540846 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
SMAD3-204ENST00000540846 IRX6P78412 446 aaPredicted RBP16.35■□□□□ 0.21
SMAD3-204ENST00000540846 TCP11L2Q8N4U5 519 aa16.35■□□□□ 0.21
SMAD3-204ENST00000540846 RCAN3Q9UKA8 241 aa16.35■□□□□ 0.21
SMAD3-204ENST00000540846 VIRMAQ69YN4 1812 aaKnown RBP16.35■□□□□ 0.21
SMAD3-204ENST00000540846 TOM1L2Q6ZVM7 507 aa16.34■□□□□ 0.21
SMAD3-204ENST00000540846 NGLY1Q96IV0 654 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms