RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 VIRMAQ69YN4 1812 aaKnown RBP14.47□□□□□ -0.09
LGR5-203ENST00000540815 PHACTR3Q96KR7 559 aa14.47□□□□□ -0.09
LGR5-203ENST00000540815 DIP2AQ14689 1571 aa14.46□□□□□ -0.09
LGR5-203ENST00000540815 NFE2L2Q16236 605 aa14.46□□□□□ -0.09
LGR5-203ENST00000540815 HMOX1P09601 288 aa14.46□□□□□ -0.1
LGR5-203ENST00000540815 MVPQ14764 893 aaKnown RBP14.46□□□□□ -0.1
LGR5-203ENST00000540815 RRS1Q15050 365 aaKnown RBP14.46□□□□□ -0.1
LGR5-203ENST00000540815 C8orf34Q49A92 452 aa14.46□□□□□ -0.1
LGR5-203ENST00000540815 SMC4Q9NTJ3 1288 aa14.46□□□□□ -0.1
LGR5-203ENST00000540815 PLEKHG3A1L390 1219 aa14.45□□□□□ -0.1
LGR5-203ENST00000540815 NUTM2FA1L443 756 aa14.45□□□□□ -0.1
LGR5-203ENST00000540815 RGS3P49796 1198 aa14.45□□□□□ -0.1
LGR5-203ENST00000540815 DZIP1LQ8IYY4 767 aaKnown RBP14.45□□□□□ -0.1
LGR5-203ENST00000540815 PTCH1Q13635 1447 aa14.44□□□□□ -0.1
LGR5-203ENST00000540815 NALCNQ8IZF0 1738 aa14.44□□□□□ -0.1
LGR5-203ENST00000540815 SSH1Q8WYL5 1049 aa14.44□□□□□ -0.1
LGR5-203ENST00000540815 ACEP12821 1306 aa14.44□□□□□ -0.1
LGR5-203ENST00000540815 TTC21BQ7Z4L5 1316 aa14.44□□□□□ -0.1
LGR5-203ENST00000540815 DLG5Q8TDM6 1919 aa14.44□□□□□ -0.1
LGR5-203ENST00000540815 FTSJ3Q8IY81 847 aaKnown RBP14.43□□□□□ -0.1
LGR5-203ENST00000540815 TBX22Q9Y458 520 aa14.43□□□□□ -0.1
LGR5-203ENST00000540815 PCDHB15Q9Y5E8 787 aa14.43□□□□□ -0.1
LGR5-203ENST00000540815 OVOS2A0A0J9YW53 1432 aa14.43□□□□□ -0.1
LGR5-203ENST00000540815 OVOS2Q6IE36 1432 aa14.43□□□□□ -0.1
LGR5-203ENST00000540815 CALD1Q05682 793 aaKnown RBP14.43□□□□□ -0.1
LGR5-203ENST00000540815 USP6P35125 1406 aa14.43□□□□□ -0.1
LGR5-203ENST00000540815 ALDH1L2Q3SY69 923 aa14.42□□□□□ -0.1
LGR5-203ENST00000540815 ZMYND15Q9H091 742 aa14.42□□□□□ -0.1
LGR5-203ENST00000540815 DAXXQ9UER7 740 aaPredicted RBP14.42□□□□□ -0.1
LGR5-203ENST00000540815 AMOTL2Q9Y2J4 779 aa14.42□□□□□ -0.1
LGR5-203ENST00000540815 TRIM27P14373 513 aa14.42□□□□□ -0.1
LGR5-203ENST00000540815 DDRGK1Q96HY6 314 aa14.42□□□□□ -0.1
LGR5-203ENST00000540815 RIMS1Q86UR5 1692 aaKnown RBP14.42□□□□□ -0.1
LGR5-203ENST00000540815 ATF7IPQ6VMQ6 1270 aa14.41□□□□□ -0.1
LGR5-203ENST00000540815 ZNF428Q96B54 188 aa14.41□□□□□ -0.1
LGR5-203ENST00000540815 THUMPD2Q9BTF0 503 aaKnown RBP14.41□□□□□ -0.1
LGR5-203ENST00000540815 RRAGDQ9NQL2 400 aaPredicted RBP14.41□□□□□ -0.1
LGR5-203ENST00000540815 KIF16BQ96L93 1317 aa14.41□□□□□ -0.1
LGR5-203ENST00000540815 SSH2Q76I76 1423 aa14.41□□□□□ -0.1
LGR5-203ENST00000540815 XRN1Q8IZH2 1706 aaKnown RBP14.41□□□□□ -0.1
LGR5-203ENST00000540815 THEMISQ8N1K5 641 aaPredicted RBP14.41□□□□□ -0.1
LGR5-203ENST00000540815 RWDD1Q9H446 243 aaPredicted RBP14.41□□□□□ -0.1
LGR5-203ENST00000540815 NOB1Q9ULX3 412 aaKnown RBP14.4□□□□□ -0.1
LGR5-203ENST00000540815 PEAK1Q9H792 1746 aa14.4□□□□□ -0.1
LGR5-203ENST00000540815 RGPD8O14715 1765 aaPredicted RBP14.4□□□□□ -0.1
LGR5-203ENST00000540815 LMOD3Q0VAK6 560 aa14.4□□□□□ -0.1
LGR5-203ENST00000540815 BRPF1P55201 1214 aaPredicted RBP14.39□□□□□ -0.11
LGR5-203ENST00000540815 IFT57Q9NWB7 429 aa14.39□□□□□ -0.11
LGR5-203ENST00000540815 DDX19BQ9UMR2 479 aa14.39□□□□□ -0.11
LGR5-203ENST00000540815 USP31Q70CQ4 1352 aa14.39□□□□□ -0.11
LGR5-203ENST00000540815 IPO8O15397 1037 aaKnown RBP14.39□□□□□ -0.11
LGR5-203ENST00000540815 GNAI1P63096 354 aa14.39□□□□□ -0.11
LGR5-203ENST00000540815 ZNF853P0CG23 659 aa14.38□□□□□ -0.11
LGR5-203ENST00000540815 RGPD1P0DJD0 1748 aa14.38□□□□□ -0.11
LGR5-203ENST00000540815 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
LGR5-203ENST00000540815 TTC21AQ8NDW8 1320 aa14.37□□□□□ -0.11
LGR5-203ENST00000540815 EIF4A2Q14240 407 aaKnown RBP14.37□□□□□ -0.11
LGR5-203ENST00000540815 AEBP1Q8IUX7 1158 aa14.36□□□□□ -0.11
LGR5-203ENST00000540815 ITPRIPQ8IWB1 547 aa14.36□□□□□ -0.11
LGR5-203ENST00000540815 PDZRN3Q9UPQ7 1066 aa14.36□□□□□ -0.11
LGR5-203ENST00000540815 FMN2Q9NZ56 1722 aa14.36□□□□□ -0.11
LGR5-203ENST00000540815 CEP170BQ9Y4F5 1589 aaPredicted RBP14.36□□□□□ -0.11
LGR5-203ENST00000540815 VAMP4O75379 141 aa14.35□□□□□ -0.11
LGR5-203ENST00000540815 PLEKHG5O94827 1062 aa14.35□□□□□ -0.11
LGR5-203ENST00000540815 HDAC1Q13547 482 aaPredicted RBP14.35□□□□□ -0.11
LGR5-203ENST00000540815 TMEM57Q8N5G2 664 aa14.35□□□□□ -0.11
LGR5-203ENST00000540815 CFAP44Q96MT7 982 aa14.35□□□□□ -0.11
LGR5-203ENST00000540815 MBIPQ9NS73 344 aa14.34□□□□□ -0.11
LGR5-203ENST00000540815 PIK3R4Q99570 1358 aa14.34□□□□□ -0.11
LGR5-203ENST00000540815 ANKARQ7Z5J8 1434 aa14.34□□□□□ -0.11
LGR5-203ENST00000540815 FAM83GA6ND36 823 aa14.34□□□□□ -0.11
LGR5-203ENST00000540815 TSPYL6Q8N831 410 aa14.34□□□□□ -0.11
LGR5-203ENST00000540815 KCNA6P17658 529 aa14.33□□□□□ -0.11
LGR5-203ENST00000540815 HSP90AB2PQ58FF8 381 aa14.33□□□□□ -0.12
LGR5-203ENST00000540815 FAM43AQ8N2R8 423 aa14.33□□□□□ -0.12
LGR5-203ENST00000540815 MRPL50Q8N5N7 158 aaKnown RBP14.33□□□□□ -0.12
LGR5-203ENST00000540815 ARHGAP45Q92619 1136 aa14.33□□□□□ -0.12
LGR5-203ENST00000540815 NAP1L5Q96NT1 182 aaPredicted RBP14.33□□□□□ -0.12
LGR5-203ENST00000540815 PIK3C2AO00443 1686 aa14.33□□□□□ -0.12
LGR5-203ENST00000540815 ZBTB40Q9NUA8 1239 aa14.33□□□□□ -0.12
LGR5-203ENST00000540815 DCTN1Q14203 1278 aa14.32□□□□□ -0.12
LGR5-203ENST00000540815 SULT6B1Q6IMI4 303 aa14.32□□□□□ -0.12
LGR5-203ENST00000540815 USP54Q70EL1 1684 aa14.31□□□□□ -0.12
LGR5-203ENST00000540815 ARHGEF10O15013 1369 aa14.31□□□□□ -0.12
LGR5-203ENST00000540815 SOX12O15370 315 aa14.31□□□□□ -0.12
LGR5-203ENST00000540815 SLKQ9H2G2 1235 aaPredicted RBP14.31□□□□□ -0.12
LGR5-203ENST00000540815 NGDNQ8NEJ9 315 aaKnown RBP14.3□□□□□ -0.12
LGR5-203ENST00000540815 ZNF142P52746 1687 aaPredicted RBP14.3□□□□□ -0.12
LGR5-203ENST00000540815 MAP3K19Q56UN5 1328 aa14.3□□□□□ -0.12
LGR5-203ENST00000540815 MARF1Q9Y4F3 1742 aaKnown RBP14.3□□□□□ -0.12
LGR5-203ENST00000540815 SBNO1A3KN83 1393 aa14.3□□□□□ -0.12
LGR5-203ENST00000540815 TWISTNBQ3B726 338 aaPredicted RBP14.3□□□□□ -0.12
LGR5-203ENST00000540815 CHD2O14647 1828 aaKnown RBP14.29□□□□□ -0.12
LGR5-203ENST00000540815 SMC5Q8IY18 1101 aa14.29□□□□□ -0.12
LGR5-203ENST00000540815 CHMP4BQ9H444 224 aaKnown RBP14.29□□□□□ -0.12
LGR5-203ENST00000540815 USP19O94966 1318 aa14.29□□□□□ -0.12
LGR5-203ENST00000540815 FLT4P35916 1363 aa14.29□□□□□ -0.12
LGR5-203ENST00000540815 C8orf58Q8NAV2 365 aa14.28□□□□□ -0.12
LGR5-203ENST00000540815 ELL2O00472 640 aaPredicted RBP14.28□□□□□ -0.12
LGR5-203ENST00000540815 GZF1Q9H116 711 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms