RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 TRAK2O60296 914 aa7.14□□□□□ -1.27
RAB3GAP1-207ENST00000539493 MSNP26038 577 aaKnown RBP7.14□□□□□ -1.27
RAB3GAP1-207ENST00000539493 ATP2B3Q16720 1220 aa7.14□□□□□ -1.27
RAB3GAP1-207ENST00000539493 CARD14Q9BXL6 1004 aa7.14□□□□□ -1.27
RAB3GAP1-207ENST00000539493 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.14□□□□□ -1.27
RAB3GAP1-207ENST00000539493 MYO5BQ9ULV0 1848 aa7.14□□□□□ -1.27
RAB3GAP1-207ENST00000539493 MFAP1P55081 439 aaKnown RBP7.14□□□□□ -1.27
RAB3GAP1-207ENST00000539493 FAM43BQ6ZT52 329 aaPredicted RBP7.14□□□□□ -1.27
RAB3GAP1-207ENST00000539493 EXOC6Q8TAG9 804 aa7.14□□□□□ -1.27
RAB3GAP1-207ENST00000539493 PDLIM2Q96JY6 352 aa7.14□□□□□ -1.27
RAB3GAP1-207ENST00000539493 PRIMPOLQ96LW4 560 aa7.14□□□□□ -1.27
RAB3GAP1-207ENST00000539493 ARHGEF28Q8N1W1 1705 aaKnown RBP7.14□□□□□ -1.27
RAB3GAP1-207ENST00000539493 CLTCQ00610 1675 aaKnown RBP7.14□□□□□ -1.27
RAB3GAP1-207ENST00000539493 KCNJ4P48050 445 aa7.13□□□□□ -1.27
RAB3GAP1-207ENST00000539493 BRPF1P55201 1214 aaPredicted RBP7.13□□□□□ -1.27
RAB3GAP1-207ENST00000539493 HMGN5P82970 282 aaKnown RBP7.13□□□□□ -1.27
RAB3GAP1-207ENST00000539493 RAI14Q9P0K7 980 aa7.13□□□□□ -1.27
RAB3GAP1-207ENST00000539493 DDX11L8A8MPP1 907 aa7.13□□□□□ -1.27
RAB3GAP1-207ENST00000539493 E9PSI1 815 aa7.13□□□□□ -1.27
RAB3GAP1-207ENST00000539493 HSP90AB3PQ58FF7 597 aa7.13□□□□□ -1.27
RAB3GAP1-207ENST00000539493 SPATA31D1Q6ZQQ2 1576 aa7.13□□□□□ -1.27
RAB3GAP1-207ENST00000539493 TULP4Q9NRJ4 1543 aa7.12□□□□□ -1.27
RAB3GAP1-207ENST00000539493 CTR9Q6PD62 1173 aa7.12□□□□□ -1.27
RAB3GAP1-207ENST00000539493 ADAMTS8Q9UP79 889 aa7.12□□□□□ -1.27
RAB3GAP1-207ENST00000539493 PATL2C9JE40 543 aaKnown RBP7.12□□□□□ -1.27
RAB3GAP1-207ENST00000539493 SATB1Q01826 763 aa7.12□□□□□ -1.27
RAB3GAP1-207ENST00000539493 SLFN14P0C7P3 912 aa7.12□□□□□ -1.27
RAB3GAP1-207ENST00000539493 PDE3BQ13370 1112 aa7.12□□□□□ -1.27
RAB3GAP1-207ENST00000539493 MLECQ14165 292 aa7.12□□□□□ -1.27
RAB3GAP1-207ENST00000539493 SIRT1Q96EB6 747 aa7.12□□□□□ -1.27
RAB3GAP1-207ENST00000539493 CALCOCO1Q9P1Z2 691 aa7.12□□□□□ -1.27
RAB3GAP1-207ENST00000539493 NCOA3Q9Y6Q9 1424 aa7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 CBX1P83916 185 aa7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 MAPK8IP2Q13387 824 aaPredicted RBP7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 CENPQQ7L2Z9 268 aaPredicted RBP7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 NBPF11Q86T75 865 aa7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 NCAPGQ9BPX3 1015 aa7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 SLC12A5Q9H2X9 1139 aa7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 NSD3Q9BZ95 1437 aa7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 A2ML1A8K2U0 1454 aa7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 NOP2P46087 812 aaKnown RBP7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 PUS7Q96PZ0 661 aaKnown RBP7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 MYCBPQ99417 103 aaPredicted RBP7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 SENP3Q9H4L4 574 aaPredicted RBP7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 BRMS1Q9HCU9 246 aa7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 ZKSCAN5Q9Y2L8 839 aa7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 EVC2Q86UK5 1308 aa7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 PTPRMP28827 1452 aa7.11□□□□□ -1.27
RAB3GAP1-207ENST00000539493 WDR43Q15061 677 aaKnown RBP eCLIP7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 SKOR2Q2VWA4 1001 aaPredicted RBP7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 ANKRD7Q92527 254 aa7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 STAG3Q9UJ98 1225 aa7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 CEP83Q9Y592 693 aa7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 GAS2L3Q86XJ1 694 aa7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 CERS3Q8IU89 383 aa7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 BSDC1Q9NW68 430 aaPredicted RBP7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 OGFRQ9NZT2 677 aa7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 ALKQ9UM73 1620 aa7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 YTHDC2Q9H6S0 1430 aaKnown RBP7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 LMOD3Q0VAK6 560 aa7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 CDCA7LQ96GN5 454 aa7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 STK26Q9P289 416 aa7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 FEZ2Q9UHY8 353 aaPredicted RBP7.1□□□□□ -1.27
RAB3GAP1-207ENST00000539493 KIF16BQ96L93 1317 aa7.09□□□□□ -1.27
RAB3GAP1-207ENST00000539493 USP32Q8NFA0 1604 aa7.09□□□□□ -1.27
RAB3GAP1-207ENST00000539493 SAFB2Q14151 953 aaKnown RBP eCLIP7.09□□□□□ -1.27
RAB3GAP1-207ENST00000539493 SH3BP1Q9Y3L3 701 aa7.09□□□□□ -1.27
RAB3GAP1-207ENST00000539493 TRIM6-TRIM34B2RNG4 842 aa7.09□□□□□ -1.27
RAB3GAP1-207ENST00000539493 TRIM34Q9BYJ4 488 aa7.09□□□□□ -1.27
RAB3GAP1-207ENST00000539493 CABP2Q9NPB3 220 aa7.09□□□□□ -1.27
RAB3GAP1-207ENST00000539493 ANKRD36BQ8N2N9 1353 aa7.09□□□□□ -1.28
RAB3GAP1-207ENST00000539493 TTC36A6NLP5 189 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 DDIT3P35638 169 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 BANK1Q8NDB2 785 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 CHMP5Q9NZZ3 219 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 CCDC172P0C7W6 258 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 NBPF9Q3BBW0 867 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 PRAM1Q96QH2 718 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 SPINK5Q9NQ38 1064 aaPredicted RBP7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 PLEKHH1Q9ULM0 1364 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 RIMS2Q9UQ26 1411 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 PRR29P0C7W0 189 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 SYCP1Q15431 976 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 ZNF592Q92610 1267 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 SMC4Q9NTJ3 1288 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 RCAN3Q9UKA8 241 aa7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 POLR3AO14802 1390 aaPredicted RBP7.08□□□□□ -1.28
RAB3GAP1-207ENST00000539493 LOC102724159A0A0B4J2E5 919 aa7.07□□□□□ -1.28
RAB3GAP1-207ENST00000539493 KIF1CO43896 1103 aaKnown RBP7.07□□□□□ -1.28
RAB3GAP1-207ENST00000539493 PWP2Q15269 919 aaKnown RBP7.07□□□□□ -1.28
RAB3GAP1-207ENST00000539493 NBPF10Q6P3W6 841 aaKnown RBP7.07□□□□□ -1.28
RAB3GAP1-207ENST00000539493 ZNF771Q7L3S4 317 aaPredicted RBP7.07□□□□□ -1.28
RAB3GAP1-207ENST00000539493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.07□□□□□ -1.28
RAB3GAP1-207ENST00000539493 ESF1Q9H501 851 aaKnown RBP7.07□□□□□ -1.28
RAB3GAP1-207ENST00000539493 CGNL1Q0VF96 1302 aa7.07□□□□□ -1.28
RAB3GAP1-207ENST00000539493 IRF6O14896 467 aa7.07□□□□□ -1.28
RAB3GAP1-207ENST00000539493 CT47A1Q5JQC4 288 aaPredicted RBP7.07□□□□□ -1.28
RAB3GAP1-207ENST00000539493 MORC1Q86VD1 984 aa7.07□□□□□ -1.28
RAB3GAP1-207ENST00000539493 ZNF692Q9BU19 519 aaPredicted RBP7.07□□□□□ -1.28
RAB3GAP1-207ENST00000539493 ZNF521Q96K83 1311 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms