RNA–Protein interactions for RNA: ENST00000536089.5

MDM2-223, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-223ENST00000536089 PBXIP1Q96AQ6 731 aa7.26□□□□□ -1.25
MDM2-223ENST00000536089 GMPR2Q9P2T1 348 aaKnown RBP7.26□□□□□ -1.25
MDM2-223ENST00000536089 STK17AQ9UEE5 414 aa7.26□□□□□ -1.25
MDM2-223ENST00000536089 ZC3H4Q9UPT8 1303 aaKnown RBP7.26□□□□□ -1.25
MDM2-223ENST00000536089 UNC13AQ9UPW8 1703 aa7.25□□□□□ -1.25
MDM2-223ENST00000536089 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.25□□□□□ -1.25
MDM2-223ENST00000536089 FBXO45P0C2W1 286 aa7.25□□□□□ -1.25
MDM2-223ENST00000536089 MMP16P51512 607 aa7.25□□□□□ -1.25
MDM2-223ENST00000536089 PTK2Q05397 1052 aa7.25□□□□□ -1.25
MDM2-223ENST00000536089 KCNH2Q12809 1159 aa7.25□□□□□ -1.25
MDM2-223ENST00000536089 TRIM32Q13049 653 aa7.25□□□□□ -1.25
MDM2-223ENST00000536089 KIFC2Q96AC6 838 aa7.25□□□□□ -1.25
MDM2-223ENST00000536089 PRDM9Q9NQV7 894 aa7.25□□□□□ -1.25
MDM2-223ENST00000536089 TFIP11Q9UBB9 837 aaKnown RBP7.25□□□□□ -1.25
MDM2-223ENST00000536089 MYO15BQ96JP2 1530 aa7.25□□□□□ -1.25
MDM2-223ENST00000536089 DXOO77932 396 aaKnown RBP7.24□□□□□ -1.25
MDM2-223ENST00000536089 CSB-PGBD3P0DP91 1061 aa7.24□□□□□ -1.25
MDM2-223ENST00000536089 AEBP1Q8IUX7 1158 aa7.24□□□□□ -1.25
MDM2-223ENST00000536089 EVA1BQ9NVM1 165 aa7.24□□□□□ -1.25
MDM2-223ENST00000536089 WIPF1O43516 503 aa7.23□□□□□ -1.25
MDM2-223ENST00000536089 CFAP70Q5T0N1 1121 aa7.23□□□□□ -1.25
MDM2-223ENST00000536089 NBPF14Q5TI25 921 aa7.23□□□□□ -1.25
MDM2-223ENST00000536089 ZNF592Q92610 1267 aa7.23□□□□□ -1.25
MDM2-223ENST00000536089 TRAIPQ9BWF2 469 aa7.23□□□□□ -1.25
MDM2-223ENST00000536089 CDCA8Q53HL2 280 aa7.22□□□□□ -1.25
MDM2-223ENST00000536089 KCTD17Q8N5Z5 321 aa7.22□□□□□ -1.25
MDM2-223ENST00000536089 GPKOWQ92917 476 aaPredicted RBP eCLIP7.22□□□□□ -1.25
MDM2-223ENST00000536089 DACH1Q9UI36 760 aa7.22□□□□□ -1.25
MDM2-223ENST00000536089 SMPD1P17405 629 aa7.21□□□□□ -1.26
MDM2-223ENST00000536089 WNT7BP56706 349 aa7.21□□□□□ -1.26
MDM2-223ENST00000536089 PDXDC2PQ6P474 469 aa7.21□□□□□ -1.26
MDM2-223ENST00000536089 TBC1D9Q6ZT07 1266 aa7.21□□□□□ -1.26
MDM2-223ENST00000536089 UCN2Q96RP3 112 aa7.21□□□□□ -1.26
MDM2-223ENST00000536089 ARHGAP9Q9BRR9 750 aa7.21□□□□□ -1.26
MDM2-223ENST00000536089 ATP13A2Q9NQ11 1180 aa7.21□□□□□ -1.26
MDM2-223ENST00000536089 PCDHB9Q9Y5E1 797 aa7.21□□□□□ -1.26
MDM2-223ENST00000536089 SHROOM4Q9ULL8 1493 aa7.21□□□□□ -1.26
MDM2-223ENST00000536089 ATP9BO43861 1147 aa7.2□□□□□ -1.26
MDM2-223ENST00000536089 SKIP12755 728 aa7.2□□□□□ -1.26
MDM2-223ENST00000536089 AGERQ15109 404 aa7.2□□□□□ -1.26
MDM2-223ENST00000536089 SLFNL1Q499Z3 407 aa7.2□□□□□ -1.26
MDM2-223ENST00000536089 ZBTB33Q86T24 672 aa7.2□□□□□ -1.26
MDM2-223ENST00000536089 MRGPRX2Q96LB1 330 aa7.2□□□□□ -1.26
MDM2-223ENST00000536089 TRIM47Q96LD4 638 aa7.2□□□□□ -1.26
MDM2-223ENST00000536089 UNC93B1Q9H1C4 597 aa7.2□□□□□ -1.26
MDM2-223ENST00000536089 GPSM3Q9Y4H4 160 aa7.2□□□□□ -1.26
MDM2-223ENST00000536089 FAM181BA6NEQ2 426 aa7.19□□□□□ -1.26
MDM2-223ENST00000536089 MCCD1P59942 119 aaPredicted RBP7.19□□□□□ -1.26
MDM2-223ENST00000536089 NFX1Q12986 1120 aaKnown RBP7.19□□□□□ -1.26
MDM2-223ENST00000536089 MAFBQ9Y5Q3 323 aaPredicted RBP7.19□□□□□ -1.26
MDM2-223ENST00000536089 DZIP3Q86Y13 1208 aaKnown RBP7.18□□□□□ -1.26
MDM2-223ENST00000536089 SLC16A10Q8TF71 515 aa7.18□□□□□ -1.26
MDM2-223ENST00000536089 VRTNQ9H8Y1 702 aa7.18□□□□□ -1.26
MDM2-223ENST00000536089 MAGEB6P1A0A0J9YX57 407 aa7.17□□□□□ -1.26
MDM2-223ENST00000536089 PIK3CDO00329 1044 aa7.17□□□□□ -1.26
MDM2-223ENST00000536089 TERTO14746 1132 aaKnown RBP7.17□□□□□ -1.26
MDM2-223ENST00000536089 CARD14Q9BXL6 1004 aa7.17□□□□□ -1.26
MDM2-223ENST00000536089 RC3H1Q5TC82 1133 aaKnown RBP7.16□□□□□ -1.26
MDM2-223ENST00000536089 PTCRAQ6ISU1 281 aaPredicted RBP7.16□□□□□ -1.26
MDM2-223ENST00000536089 RNF135Q8IUD6 432 aa7.16□□□□□ -1.26
MDM2-223ENST00000536089 ADAM32Q8TC27 787 aa7.16□□□□□ -1.26
MDM2-223ENST00000536089 USTQ9Y2C2 406 aa7.16□□□□□ -1.26
MDM2-223ENST00000536089 LINC01559Q495D7 138 aa7.15□□□□□ -1.26
MDM2-223ENST00000536089 DEPDC4Q8N2C3 294 aa7.15□□□□□ -1.26
MDM2-223ENST00000536089 NFATC2IPQ8NCF5 419 aa7.15□□□□□ -1.26
MDM2-223ENST00000536089 BAP1Q92560 729 aa7.15□□□□□ -1.26
MDM2-223ENST00000536089 CEP126Q9P2H0 1117 aa7.15□□□□□ -1.26
MDM2-223ENST00000536089 USP17L3A6NCW0 530 aa7.14□□□□□ -1.27
MDM2-223ENST00000536089 USP17L4A6NCW7 530 aa7.14□□□□□ -1.27
MDM2-223ENST00000536089 USP17L5A8MUK1 530 aa7.14□□□□□ -1.27
MDM2-223ENST00000536089 J3QL48 77 aa7.14□□□□□ -1.27
MDM2-223ENST00000536089 USP17L2Q6R6M4 530 aa7.14□□□□□ -1.27
MDM2-223ENST00000536089 USP17L1Q7RTZ2 530 aa7.14□□□□□ -1.27
MDM2-223ENST00000536089 BPHLQ86WA6 291 aaPredicted RBP7.14□□□□□ -1.27
MDM2-223ENST00000536089 NPAS3Q8IXF0 933 aa7.14□□□□□ -1.27
MDM2-223ENST00000536089 BICRAQ9NZM4 1560 aa7.14□□□□□ -1.27
MDM2-223ENST00000536089 ATG7O95352 703 aa7.13□□□□□ -1.27
MDM2-223ENST00000536089 SRPK2P78362 688 aaKnown RBP7.13□□□□□ -1.27
MDM2-223ENST00000536089 PATL2C9JE40 543 aaKnown RBP7.12□□□□□ -1.27
MDM2-223ENST00000536089 ALDH1A1P00352 501 aa7.12□□□□□ -1.27
MDM2-223ENST00000536089 SNRPBP14678 240 aaKnown RBP7.12□□□□□ -1.27
MDM2-223ENST00000536089 LARP1Q6PKG0 1096 aaKnown RBP7.12□□□□□ -1.27
MDM2-223ENST00000536089 SH3BP5LQ7L8J4 393 aa7.12□□□□□ -1.27
MDM2-223ENST00000536089 PLPP7Q8NBV4 271 aa7.12□□□□□ -1.27
MDM2-223ENST00000536089 FAM174AQ8TBP5 190 aa7.12□□□□□ -1.27
MDM2-223ENST00000536089 HPS1Q92902 700 aa7.12□□□□□ -1.27
MDM2-223ENST00000536089 OCSTAMPQ9BR26 566 aa7.12□□□□□ -1.27
MDM2-223ENST00000536089 MKRN1Q9UHC7 482 aaKnown RBP7.12□□□□□ -1.27
MDM2-223ENST00000536089 CCDC9Q9Y3X0 531 aaKnown RBP7.12□□□□□ -1.27
MDM2-223ENST00000536089 CARNS1A5YM72 827 aa7.11□□□□□ -1.27
MDM2-223ENST00000536089 NCOA4Q13772 614 aa7.11□□□□□ -1.27
MDM2-223ENST00000536089 EML3Q32P44 896 aa7.11□□□□□ -1.27
MDM2-223ENST00000536089 ZNF511Q8NB15 262 aa7.11□□□□□ -1.27
MDM2-223ENST00000536089 FOXJ1Q92949 421 aa7.11□□□□□ -1.27
MDM2-223ENST00000536089 SLC10A4Q96EP9 437 aa7.11□□□□□ -1.27
MDM2-223ENST00000536089 WASF2Q9Y6W5 498 aa7.11□□□□□ -1.27
MDM2-223ENST00000536089 RASA1P20936 1047 aa7.1□□□□□ -1.27
MDM2-223ENST00000536089 MAP7D1Q3KQU3 841 aa7.1□□□□□ -1.27
MDM2-223ENST00000536089 KANK4Q5T7N3 995 aaPredicted RBP7.1□□□□□ -1.27
MDM2-223ENST00000536089 PLEKHM2Q8IWE5 1019 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms