RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 USP17L8P0C7I0 530 aa11.5□□□□□ -0.57
VBP1-203ENST00000535916 CCDC116Q8IYX3 515 aa11.5□□□□□ -0.57
VBP1-203ENST00000535916 SLC16A10Q8TF71 515 aa11.5□□□□□ -0.57
VBP1-203ENST00000535916 SUZ12Q15022 739 aaKnown RBP11.49□□□□□ -0.57
VBP1-203ENST00000535916 LINC00528Q8N1L1 170 aa11.49□□□□□ -0.57
VBP1-203ENST00000535916 OCSTAMPQ9BR26 566 aa11.49□□□□□ -0.57
VBP1-203ENST00000535916 ZC3H4Q9UPT8 1303 aaKnown RBP11.49□□□□□ -0.57
VBP1-203ENST00000535916 RFC5P40937 340 aa11.48□□□□□ -0.57
VBP1-203ENST00000535916 NEUROD2Q15784 382 aa11.48□□□□□ -0.57
VBP1-203ENST00000535916 SLC10A4Q96EP9 437 aa11.48□□□□□ -0.57
VBP1-203ENST00000535916 EMILIN1Q9Y6C2 1016 aa11.48□□□□□ -0.57
VBP1-203ENST00000535916 H3BM21 787 aa11.47□□□□□ -0.57
VBP1-203ENST00000535916 BMP2P12643 396 aa11.47□□□□□ -0.57
VBP1-203ENST00000535916 ZBTB33Q86T24 672 aa11.47□□□□□ -0.57
VBP1-203ENST00000535916 NPAS3Q8IXF0 933 aa11.47□□□□□ -0.57
VBP1-203ENST00000535916 UPP2O95045 317 aa11.46□□□□□ -0.57
VBP1-203ENST00000535916 PPP1R26Q5T8A7 1209 aaPredicted RBP11.46□□□□□ -0.57
VBP1-203ENST00000535916 PTK2Q05397 1052 aa11.45□□□□□ -0.58
VBP1-203ENST00000535916 KCTD15Q96SI1 283 aaPredicted RBP11.45□□□□□ -0.58
VBP1-203ENST00000535916 MAN1A2O60476 641 aa11.44□□□□□ -0.58
VBP1-203ENST00000535916 IL27Q8NEV9 243 aa11.44□□□□□ -0.58
VBP1-203ENST00000535916 ADAM32Q8TC27 787 aa11.44□□□□□ -0.58
VBP1-203ENST00000535916 PCMTD1Q96MG8 357 aaPredicted RBP11.44□□□□□ -0.58
VBP1-203ENST00000535916 GOPCQ9HD26 462 aa11.44□□□□□ -0.58
VBP1-203ENST00000535916 ERBB4Q15303 1308 aa11.43□□□□□ -0.58
VBP1-203ENST00000535916 GMPRP36959 345 aa11.43□□□□□ -0.58
VBP1-203ENST00000535916 IRF7Q92985 503 aa11.43□□□□□ -0.58
VBP1-203ENST00000535916 CDV3Q9UKY7 258 aaKnown RBP11.43□□□□□ -0.58
VBP1-203ENST00000535916 GPSM3Q9Y4H4 160 aa11.43□□□□□ -0.58
VBP1-203ENST00000535916 CBLBQ13191 982 aa11.42□□□□□ -0.58
VBP1-203ENST00000535916 TSEN34Q9BSV6 310 aaKnown RBP11.42□□□□□ -0.58
VBP1-203ENST00000535916 PGPEP1Q9NXJ5 209 aa11.42□□□□□ -0.58
VBP1-203ENST00000535916 SOS2Q07890 1332 aaPredicted RBP11.41□□□□□ -0.58
VBP1-203ENST00000535916 INTS6LQ5JSJ4 861 aaKnown RBP11.41□□□□□ -0.58
VBP1-203ENST00000535916 PNMA1Q8ND90 353 aa11.4□□□□□ -0.58
VBP1-203ENST00000535916 TRIM34Q9BYJ4 488 aa11.4□□□□□ -0.58
VBP1-203ENST00000535916 DNMT3LQ9UJW3 386 aa11.4□□□□□ -0.58
VBP1-203ENST00000535916 BRPF1P55201 1214 aaPredicted RBP11.39□□□□□ -0.59
VBP1-203ENST00000535916 Q6ZVU0 165 aa11.38□□□□□ -0.59
VBP1-203ENST00000535916 DHX9Q08211 1270 aaKnown RBP11.37□□□□□ -0.59
VBP1-203ENST00000535916 TMEM259Q4ZIN3 620 aa11.37□□□□□ -0.59
VBP1-203ENST00000535916 RAB15P59190 212 aa11.35□□□□□ -0.59
VBP1-203ENST00000535916 NBPF20Q3BBV1 942 aa11.35□□□□□ -0.59
VBP1-203ENST00000535916 DZIP3Q86Y13 1208 aaKnown RBP11.35□□□□□ -0.59
VBP1-203ENST00000535916 TTLL8A6PVC2 850 aa11.34□□□□□ -0.59
VBP1-203ENST00000535916 PPFIA3O75145 1194 aa11.34□□□□□ -0.59
VBP1-203ENST00000535916 AGBL1Q96MI9 1066 aa11.34□□□□□ -0.59
VBP1-203ENST00000535916 TMPRSS4Q9NRS4 437 aa11.34□□□□□ -0.59
VBP1-203ENST00000535916 SPINT1O43278 529 aa11.33□□□□□ -0.6
VBP1-203ENST00000535916 FIGNL2A6NMB9 653 aa11.32□□□□□ -0.6
VBP1-203ENST00000535916 VSIG8P0DPA2 414 aa11.32□□□□□ -0.6
VBP1-203ENST00000535916 LORP23490 312 aaPredicted RBP11.32□□□□□ -0.6
VBP1-203ENST00000535916 GJD4Q96KN9 370 aaPredicted RBP11.32□□□□□ -0.6
VBP1-203ENST00000535916 RELBQ01201 579 aa11.31□□□□□ -0.6
VBP1-203ENST00000535916 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.31□□□□□ -0.6
VBP1-203ENST00000535916 ZSCAN1Q8NBB4 408 aa11.31□□□□□ -0.6
VBP1-203ENST00000535916 ERVH48-1M5A8F1 160 aa11.3□□□□□ -0.6
VBP1-203ENST00000535916 ZNF784Q8NCA9 323 aaPredicted RBP11.3□□□□□ -0.6
VBP1-203ENST00000535916 ESPNB1AK53 854 aa11.29□□□□□ -0.6
VBP1-203ENST00000535916 CTSOP43234 321 aaPredicted RBP11.28□□□□□ -0.6
VBP1-203ENST00000535916 PTSQ03393 145 aa11.28□□□□□ -0.6
VBP1-203ENST00000535916 INSM2Q96T92 566 aaPredicted RBP11.28□□□□□ -0.6
VBP1-203ENST00000535916 ZBBXA8MT70 800 aa11.27□□□□□ -0.61
VBP1-203ENST00000535916 LILRA1O75019 489 aa11.27□□□□□ -0.61
VBP1-203ENST00000535916 FBXO45P0C2W1 286 aa11.27□□□□□ -0.61
VBP1-203ENST00000535916 TPRNQ4KMQ1 711 aa11.27□□□□□ -0.61
VBP1-203ENST00000535916 ADD1P35611 737 aaKnown RBP11.26□□□□□ -0.61
VBP1-203ENST00000535916 ZNF395Q9H8N7 513 aaPredicted RBP11.26□□□□□ -0.61
VBP1-203ENST00000535916 PCDHB9Q9Y5E1 797 aa11.26□□□□□ -0.61
VBP1-203ENST00000535916 ADH1AP07327 375 aa11.25□□□□□ -0.61
VBP1-203ENST00000535916 POLMQ9NP87 494 aaPredicted RBP11.24□□□□□ -0.61
VBP1-203ENST00000535916 GIGYF1O75420 1035 aaPredicted RBP11.23□□□□□ -0.61
VBP1-203ENST00000535916 SEPT12Q8IYM1 358 aa11.23□□□□□ -0.61
VBP1-203ENST00000535916 KDF1Q8NAX2 398 aaPredicted RBP11.23□□□□□ -0.61
VBP1-203ENST00000535916 CYLDQ9NQC7 956 aa11.23□□□□□ -0.61
VBP1-203ENST00000535916 CCDC155Q8N6L0 562 aa11.21□□□□□ -0.61
VBP1-203ENST00000535916 MTMR14Q8NCE2 650 aa11.21□□□□□ -0.61
VBP1-203ENST00000535916 BANK1Q8NDB2 785 aa11.21□□□□□ -0.61
VBP1-203ENST00000535916 RNF217Q8TC41 542 aa11.21□□□□□ -0.61
VBP1-203ENST00000535916 GPR37L1O60883 481 aa11.2□□□□□ -0.62
VBP1-203ENST00000535916 PTGIRP43119 386 aa11.2□□□□□ -0.62
VBP1-203ENST00000535916 GPR161Q8N6U8 529 aaKnown RBP11.2□□□□□ -0.62
VBP1-203ENST00000535916 SLC35F4A4IF30 521 aa11.19□□□□□ -0.62
VBP1-203ENST00000535916 FOXD4L5Q5VV16 416 aaPredicted RBP11.19□□□□□ -0.62
VBP1-203ENST00000535916 SNRKQ9NRH2 765 aa11.19□□□□□ -0.62
VBP1-203ENST00000535916 NR1H3Q13133 447 aa11.18□□□□□ -0.62
VBP1-203ENST00000535916 KRT76Q01546 638 aa11.17□□□□□ -0.62
VBP1-203ENST00000535916 SOCS7O14512 581 aa11.16□□□□□ -0.62
VBP1-203ENST00000535916 NDUFB9Q9Y6M9 179 aa11.16□□□□□ -0.62
VBP1-203ENST00000535916 NANOS1Q8WY41 292 aaKnown RBP11.15□□□□□ -0.62
VBP1-203ENST00000535916 SENP3-EIF4A1A0A087X0R7 540 aa11.14□□□□□ -0.63
VBP1-203ENST00000535916 ITGA6P23229 1130 aa11.14□□□□□ -0.63
VBP1-203ENST00000535916 CNTNAP3BQ96NU0 1288 aa11.13□□□□□ -0.63
VBP1-203ENST00000535916 CNTNAP3Q9BZ76 1288 aa11.13□□□□□ -0.63
VBP1-203ENST00000535916 ATP5J2-PTCD1G3V325 749 aa11.12□□□□□ -0.63
VBP1-203ENST00000535916 LYSMD3Q7Z3D4 306 aa11.12□□□□□ -0.63
VBP1-203ENST00000535916 VWA5B2Q8N398 1253 aa11.12□□□□□ -0.63
VBP1-203ENST00000535916 COL25A1Q9BXS0 654 aaPredicted RBP11.12□□□□□ -0.63
VBP1-203ENST00000535916 CDC14CA4D256 554 aa11.11□□□□□ -0.63
VBP1-203ENST00000535916 ERVK-9P63128 1117 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms