RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 TTC21BQ7Z4L5 1316 aa16.13■□□□□ 0.17
CLSTN3-206ENST00000535668 USP31Q70CQ4 1352 aa16.13■□□□□ 0.17
CLSTN3-206ENST00000535668 USP54Q70EL1 1684 aa16.12■□□□□ 0.17
CLSTN3-206ENST00000535668 NUP188Q5SRE5 1749 aa16.12■□□□□ 0.17
CLSTN3-206ENST00000535668 AKAP12Q02952 1782 aa16.12■□□□□ 0.17
CLSTN3-206ENST00000535668 CARD10Q9BWT7 1032 aa16.11■□□□□ 0.17
CLSTN3-206ENST00000535668 USP35Q9P2H5 1018 aa16.11■□□□□ 0.17
CLSTN3-206ENST00000535668 AXIN2Q9Y2T1 843 aa16.11■□□□□ 0.17
CLSTN3-206ENST00000535668 NFAT5O94916 1531 aa16.1■□□□□ 0.17
CLSTN3-206ENST00000535668 NBPF14Q5TI25 921 aa16.1■□□□□ 0.17
CLSTN3-206ENST00000535668 BCL11BQ9C0K0 894 aaPredicted RBP16.1■□□□□ 0.17
CLSTN3-206ENST00000535668 ROCK2O75116 1388 aaKnown RBP16.1■□□□□ 0.17
CLSTN3-206ENST00000535668 SBF2Q86WG5 1849 aa16.1■□□□□ 0.17
CLSTN3-206ENST00000535668 LRRC37A3O60309 1634 aa16.09■□□□□ 0.17
CLSTN3-206ENST00000535668 DDB1Q16531 1140 aa16.08■□□□□ 0.16
CLSTN3-206ENST00000535668 CCDC7Q96M83 1385 aa16.07■□□□□ 0.16
CLSTN3-206ENST00000535668 WNK3Q9BYP7 1800 aa16.06■□□□□ 0.16
CLSTN3-206ENST00000535668 CD163L1Q9NR16 1453 aa16.06■□□□□ 0.16
CLSTN3-206ENST00000535668 SIN3AQ96ST3 1273 aa16.06■□□□□ 0.16
CLSTN3-206ENST00000535668 MON2Q7Z3U7 1717 aa16.05■□□□□ 0.16
CLSTN3-206ENST00000535668 TOM1L2Q6ZVM7 507 aa16.05■□□□□ 0.16
CLSTN3-206ENST00000535668 MARCH10Q8NA82 808 aaPredicted RBP16.05■□□□□ 0.16
CLSTN3-206ENST00000535668 KTN1Q86UP2 1357 aaKnown RBP16.04■□□□□ 0.16
CLSTN3-206ENST00000535668 PROM2Q8N271 834 aa16.04■□□□□ 0.16
CLSTN3-206ENST00000535668 NINLQ9Y2I6 1382 aa16.03■□□□□ 0.16
CLSTN3-206ENST00000535668 KCNQ2O43526 872 aa16.02■□□□□ 0.16
CLSTN3-206ENST00000535668 SLC24A1O60721 1099 aa16.02■□□□□ 0.16
CLSTN3-206ENST00000535668 SPON1Q9HCB6 807 aa16.02■□□□□ 0.16
CLSTN3-206ENST00000535668 ERBB3P21860 1342 aa16.01■□□□□ 0.15
CLSTN3-206ENST00000535668 TNS2Q63HR2 1409 aa16.01■□□□□ 0.15
CLSTN3-206ENST00000535668 EXOC5O00471 708 aa16■□□□□ 0.15
CLSTN3-206ENST00000535668 EDC4Q6P2E9 1401 aaKnown RBP16■□□□□ 0.15
CLSTN3-206ENST00000535668 CASZ1Q86V15 1759 aa16■□□□□ 0.15
CLSTN3-206ENST00000535668 RGPD5Q99666 1765 aa15.98■□□□□ 0.15
CLSTN3-206ENST00000535668 PTF1AQ7RTS3 328 aa15.97■□□□□ 0.15
CLSTN3-206ENST00000535668 ANO8Q9HCE9 1232 aaPredicted RBP15.97■□□□□ 0.15
CLSTN3-206ENST00000535668 CARD11Q9BXL7 1154 aa15.96■□□□□ 0.15
CLSTN3-206ENST00000535668 TXNRD1Q16881 649 aa15.95■□□□□ 0.14
CLSTN3-206ENST00000535668 TESK2Q96S53 571 aa15.95■□□□□ 0.14
CLSTN3-206ENST00000535668 TERF2IPQ9NYB0 399 aa15.95■□□□□ 0.14
CLSTN3-206ENST00000535668 UTRNP46939 3433 aa15.94■□□□□ 0.14
CLSTN3-206ENST00000535668 PTGER2P43116 358 aa15.94■□□□□ 0.14
CLSTN3-206ENST00000535668 NEUROD1Q13562 356 aa15.94■□□□□ 0.14
CLSTN3-206ENST00000535668 HDGFL2Q7Z4V5 671 aaPredicted RBP15.94■□□□□ 0.14
CLSTN3-206ENST00000535668 NHSQ6T4R5 1651 aa15.94■□□□□ 0.14
CLSTN3-206ENST00000535668 A0A1W2PP64 1363 aa15.93■□□□□ 0.14
CLSTN3-206ENST00000535668 CSB-PGBD3P0DP91 1061 aa15.93■□□□□ 0.14
CLSTN3-206ENST00000535668 SLC15A2Q16348 729 aa15.93■□□□□ 0.14
CLSTN3-206ENST00000535668 IP6K1Q92551 441 aa15.93■□□□□ 0.14
CLSTN3-206ENST00000535668 SGIP1Q9BQI5 828 aa15.93■□□□□ 0.14
CLSTN3-206ENST00000535668 SLC12A5Q9H2X9 1139 aa15.93■□□□□ 0.14
CLSTN3-206ENST00000535668 IL2RBP14784 551 aa15.92■□□□□ 0.14
CLSTN3-206ENST00000535668 NME9Q86XW9 330 aa15.92■□□□□ 0.14
CLSTN3-206ENST00000535668 PAPPAQ13219 1627 aa15.91■□□□□ 0.14
CLSTN3-206ENST00000535668 MAP3K5Q99683 1374 aa15.91■□□□□ 0.14
CLSTN3-206ENST00000535668 LTN1O94822 1766 aa15.9■□□□□ 0.14
CLSTN3-206ENST00000535668 FAM208AQ9UK61 1670 aaKnown RBP15.9■□□□□ 0.14
CLSTN3-206ENST00000535668 ZBTB7CA1YPR0 619 aa15.89■□□□□ 0.13
CLSTN3-206ENST00000535668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.89■□□□□ 0.13
CLSTN3-206ENST00000535668 ANKRD24Q8TF21 1146 aa15.89■□□□□ 0.13
CLSTN3-206ENST00000535668 MTFR1LQ9H019 292 aa15.89■□□□□ 0.13
CLSTN3-206ENST00000535668 STK32BQ9NY57 414 aa15.88■□□□□ 0.13
CLSTN3-206ENST00000535668 TONSLQ96HA7 1378 aa15.87■□□□□ 0.13
CLSTN3-206ENST00000535668 PDGFDQ9GZP0 370 aaPredicted RBP15.87■□□□□ 0.13
CLSTN3-206ENST00000535668 NLRP2Q9NX02 1062 aa15.87■□□□□ 0.13
CLSTN3-206ENST00000535668 SLC27A3Q5K4L6 730 aa15.86■□□□□ 0.13
CLSTN3-206ENST00000535668 PPP1R1BQ9UD71 204 aaPredicted RBP15.86■□□□□ 0.13
CLSTN3-206ENST00000535668 RTL1A6NKG5 1358 aa15.86■□□□□ 0.13
CLSTN3-206ENST00000535668 KIF24Q5T7B8 1368 aa15.86■□□□□ 0.13
CLSTN3-206ENST00000535668 ANKRD36BQ8N2N9 1353 aa15.86■□□□□ 0.13
CLSTN3-206ENST00000535668 COL24A1Q17RW2 1714 aa15.85■□□□□ 0.13
CLSTN3-206ENST00000535668 SOX12O15370 315 aa15.85■□□□□ 0.13
CLSTN3-206ENST00000535668 TMC1Q8TDI8 760 aa15.85■□□□□ 0.13
CLSTN3-206ENST00000535668 SLC16A10Q8TF71 515 aa15.85■□□□□ 0.13
CLSTN3-206ENST00000535668 CGNL1Q0VF96 1302 aa15.85■□□□□ 0.13
CLSTN3-206ENST00000535668 ST20-MTHFSA0A0A6YYL1 179 aa15.84■□□□□ 0.13
CLSTN3-206ENST00000535668 DCAF8L1A6NGE4 600 aa15.84■□□□□ 0.13
CLSTN3-206ENST00000535668 YY1P25490 414 aa15.84■□□□□ 0.13
CLSTN3-206ENST00000535668 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
CLSTN3-206ENST00000535668 QSER1Q2KHR3 1735 aa15.84■□□□□ 0.13
CLSTN3-206ENST00000535668 BTAF1O14981 1849 aa15.84■□□□□ 0.13
CLSTN3-206ENST00000535668 MAP3K19Q56UN5 1328 aa15.83■□□□□ 0.12
CLSTN3-206ENST00000535668 HOXC9P31274 260 aa15.82■□□□□ 0.12
CLSTN3-206ENST00000535668 COG3Q96JB2 828 aa15.82■□□□□ 0.12
CLSTN3-206ENST00000535668 SYT17Q9BSW7 474 aa15.82■□□□□ 0.12
CLSTN3-206ENST00000535668 LRRC4BQ9NT99 713 aa15.82■□□□□ 0.12
CLSTN3-206ENST00000535668 ZBTB7AO95365 584 aa15.81■□□□□ 0.12
CLSTN3-206ENST00000535668 HMGB2P26583 209 aaKnown RBP15.81■□□□□ 0.12
CLSTN3-206ENST00000535668 MYOM1P52179 1685 aa15.81■□□□□ 0.12
CLSTN3-206ENST00000535668 FYB1O15117 783 aa15.8■□□□□ 0.12
CLSTN3-206ENST00000535668 TIMELESSQ9UNS1 1208 aa15.8■□□□□ 0.12
CLSTN3-206ENST00000535668 KAT6BQ8WYB5 2073 aa15.79■□□□□ 0.12
CLSTN3-206ENST00000535668 NSD2O96028 1365 aa15.79■□□□□ 0.12
CLSTN3-206ENST00000535668 ACSBG1Q96GR2 724 aa15.78■□□□□ 0.12
CLSTN3-206ENST00000535668 FHDC1Q9C0D6 1143 aaPredicted RBP15.78■□□□□ 0.12
CLSTN3-206ENST00000535668 NCAPD2Q15021 1401 aa15.77■□□□□ 0.12
CLSTN3-206ENST00000535668 LY75O60449 1722 aa15.77■□□□□ 0.12
CLSTN3-206ENST00000535668 ZNF827Q17R98 1081 aa15.77■□□□□ 0.12
CLSTN3-206ENST00000535668 CDCA8Q53HL2 280 aa15.77■□□□□ 0.12
CLSTN3-206ENST00000535668 ZCRB1Q8TBF4 217 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms