RNA–Protein interactions for RNA: ENST00000534799.6

NPIPP1-202, Transcript of nuclear pore complex interacting protein pseudogene 1, humanhuman

TSL 3 BASIC

Gene NPIPP1, Length 1,214 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPP1-202ENST00000534799 RGPD1P0DJD0 1748 aa16.22■□□□□ 0.19
NPIPP1-202ENST00000534799 OVOS2A0A0J9YW53 1432 aa16.22■□□□□ 0.19
NPIPP1-202ENST00000534799 OVOS2Q6IE36 1432 aa16.22■□□□□ 0.19
NPIPP1-202ENST00000534799 EXOSC9Q06265 439 aaKnown RBP16.22■□□□□ 0.19
NPIPP1-202ENST00000534799 CHMP4BQ9H444 224 aaKnown RBP16.22■□□□□ 0.19
NPIPP1-202ENST00000534799 SMC4Q9NTJ3 1288 aa16.22■□□□□ 0.19
NPIPP1-202ENST00000534799 IGHDP01880 384 aa16.21■□□□□ 0.19
NPIPP1-202ENST00000534799 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.21■□□□□ 0.19
NPIPP1-202ENST00000534799 USP35Q9P2H5 1018 aa16.21■□□□□ 0.19
NPIPP1-202ENST00000534799 ROBO2Q9HCK4 1378 aa16.21■□□□□ 0.19
NPIPP1-202ENST00000534799 CEP170BQ9Y4F5 1589 aaPredicted RBP16.21■□□□□ 0.18
NPIPP1-202ENST00000534799 PLEKHG3A1L390 1219 aa16.2■□□□□ 0.18
NPIPP1-202ENST00000534799 RLBP1P12271 317 aa16.2■□□□□ 0.18
NPIPP1-202ENST00000534799 PRKAR2BP31323 418 aa16.2■□□□□ 0.18
NPIPP1-202ENST00000534799 IL13P35225 146 aa16.2■□□□□ 0.18
NPIPP1-202ENST00000534799 ATF7IPQ6VMQ6 1270 aa16.2■□□□□ 0.18
NPIPP1-202ENST00000534799 TXNDC2Q86VQ3 553 aa16.2■□□□□ 0.18
NPIPP1-202ENST00000534799 RGS3P49796 1198 aa16.19■□□□□ 0.18
NPIPP1-202ENST00000534799 GNAI1P63096 354 aa16.19■□□□□ 0.18
NPIPP1-202ENST00000534799 RTL5Q5HYW3 569 aaPredicted RBP16.19■□□□□ 0.18
NPIPP1-202ENST00000534799 IFT57Q9NWB7 429 aa16.19■□□□□ 0.18
NPIPP1-202ENST00000534799 USP6P35125 1406 aa16.19■□□□□ 0.18
NPIPP1-202ENST00000534799 PIK3R4Q99570 1358 aa16.18■□□□□ 0.18
NPIPP1-202ENST00000534799 HDAC1Q13547 482 aaPredicted RBP16.18■□□□□ 0.18
NPIPP1-202ENST00000534799 TSR2Q969E8 191 aaKnown RBP16.18■□□□□ 0.18
NPIPP1-202ENST00000534799 EID1Q9Y6B2 187 aa16.18■□□□□ 0.18
NPIPP1-202ENST00000534799 TTC21AQ8NDW8 1320 aa16.18■□□□□ 0.18
NPIPP1-202ENST00000534799 USP31Q70CQ4 1352 aa16.17■□□□□ 0.18
NPIPP1-202ENST00000534799 NME9Q86XW9 330 aa16.17■□□□□ 0.18
NPIPP1-202ENST00000534799 SSH1Q8WYL5 1049 aa16.17■□□□□ 0.18
NPIPP1-202ENST00000534799 ARHGAP45Q92619 1136 aa16.17■□□□□ 0.18
NPIPP1-202ENST00000534799 PRR36Q9H6K5 1346 aa16.17■□□□□ 0.18
NPIPP1-202ENST00000534799 TRIM27P14373 513 aa16.16■□□□□ 0.18
NPIPP1-202ENST00000534799 HAP1P54257 671 aaPredicted RBP16.16■□□□□ 0.18
NPIPP1-202ENST00000534799 TBX22Q9Y458 520 aa16.16■□□□□ 0.18
NPIPP1-202ENST00000534799 PCDHB15Q9Y5E8 787 aa16.16■□□□□ 0.18
NPIPP1-202ENST00000534799 SSH2Q76I76 1423 aa16.16■□□□□ 0.18
NPIPP1-202ENST00000534799 ANKARQ7Z5J8 1434 aa16.16■□□□□ 0.18
NPIPP1-202ENST00000534799 SKAP1Q86WV1 359 aa16.15■□□□□ 0.18
NPIPP1-202ENST00000534799 BCL2L13Q9BXK5 485 aa16.15■□□□□ 0.18
NPIPP1-202ENST00000534799 DAXXQ9UER7 740 aaPredicted RBP16.15■□□□□ 0.18
NPIPP1-202ENST00000534799 TTC21BQ7Z4L5 1316 aa16.15■□□□□ 0.18
NPIPP1-202ENST00000534799 PTPRUQ92729 1446 aa16.14■□□□□ 0.17
NPIPP1-202ENST00000534799 ZNF853P0CG23 659 aa16.14■□□□□ 0.17
NPIPP1-202ENST00000534799 EMILIN1Q9Y6C2 1016 aa16.14■□□□□ 0.17
NPIPP1-202ENST00000534799 PEAK1Q9H792 1746 aa16.14■□□□□ 0.17
NPIPP1-202ENST00000534799 KIF24Q5T7B8 1368 aa16.13■□□□□ 0.17
NPIPP1-202ENST00000534799 PDZRN3Q9UPQ7 1066 aa16.13■□□□□ 0.17
NPIPP1-202ENST00000534799 HSPA1LP34931 641 aa16.12■□□□□ 0.17
NPIPP1-202ENST00000534799 ARHGEF10O15013 1369 aa16.12■□□□□ 0.17
NPIPP1-202ENST00000534799 SMC5Q8IY18 1101 aa16.11■□□□□ 0.17
NPIPP1-202ENST00000534799 UPF2Q9HAU5 1272 aaKnown RBP16.11■□□□□ 0.17
NPIPP1-202ENST00000534799 NOB1Q9ULX3 412 aaKnown RBP16.11■□□□□ 0.17
NPIPP1-202ENST00000534799 TNNQ9UQP3 1299 aa16.11■□□□□ 0.17
NPIPP1-202ENST00000534799 LTKP29376 864 aa16.1■□□□□ 0.17
NPIPP1-202ENST00000534799 ITPRIPQ8IWB1 547 aa16.1■□□□□ 0.17
NPIPP1-202ENST00000534799 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
NPIPP1-202ENST00000534799 CFAP44Q96MT7 982 aa16.1■□□□□ 0.17
NPIPP1-202ENST00000534799 ACEP12821 1306 aa16.1■□□□□ 0.17
NPIPP1-202ENST00000534799 TOM1O60784 492 aa16.09■□□□□ 0.17
NPIPP1-202ENST00000534799 ZBTB40Q9NUA8 1239 aa16.09■□□□□ 0.17
NPIPP1-202ENST00000534799 PIK3C2AO00443 1686 aa16.08■□□□□ 0.17
NPIPP1-202ENST00000534799 RGPD8O14715 1765 aaPredicted RBP16.08■□□□□ 0.17
NPIPP1-202ENST00000534799 HMOX1P09601 288 aa16.08■□□□□ 0.16
NPIPP1-202ENST00000534799 PIP4K2BP78356 416 aa16.08■□□□□ 0.16
NPIPP1-202ENST00000534799 TMEM57Q8N5G2 664 aa16.08■□□□□ 0.16
NPIPP1-202ENST00000534799 PHACTR3Q96KR7 559 aa16.08■□□□□ 0.16
NPIPP1-202ENST00000534799 KIAA0232Q92628 1395 aa16.08■□□□□ 0.16
NPIPP1-202ENST00000534799 VAMP4O75379 141 aa16.07■□□□□ 0.16
NPIPP1-202ENST00000534799 BECN1Q14457 450 aa16.07■□□□□ 0.16
NPIPP1-202ENST00000534799 MRPL50Q8N5N7 158 aaKnown RBP16.07■□□□□ 0.16
NPIPP1-202ENST00000534799 API5Q9BZZ5 524 aaKnown RBP16.07■□□□□ 0.16
NPIPP1-202ENST00000534799 ABCC4O15439 1325 aa16.07■□□□□ 0.16
NPIPP1-202ENST00000534799 SBNO1A3KN83 1393 aa16.07■□□□□ 0.16
NPIPP1-202ENST00000534799 MARF1Q9Y4F3 1742 aaKnown RBP16.06■□□□□ 0.16
NPIPP1-202ENST00000534799 LRRC37A3O60309 1634 aa16.06■□□□□ 0.16
NPIPP1-202ENST00000534799 MED1Q15648 1581 aaPredicted RBP16.06■□□□□ 0.16
NPIPP1-202ENST00000534799 FLT4P35916 1363 aa16.06■□□□□ 0.16
NPIPP1-202ENST00000534799 NBR1Q14596 966 aa16.06■□□□□ 0.16
NPIPP1-202ENST00000534799 CHD2O14647 1828 aaKnown RBP16.05■□□□□ 0.16
NPIPP1-202ENST00000534799 USP19O94966 1318 aa16.05■□□□□ 0.16
NPIPP1-202ENST00000534799 EIF4A2Q14240 407 aaKnown RBP16.05■□□□□ 0.16
NPIPP1-202ENST00000534799 ANKLE2Q86XL3 938 aa16.05■□□□□ 0.16
NPIPP1-202ENST00000534799 MBIPQ9NS73 344 aa16.05■□□□□ 0.16
NPIPP1-202ENST00000534799 ZRANB1Q9UGI0 708 aa16.05■□□□□ 0.16
NPIPP1-202ENST00000534799 KDRP35968 1356 aa16.04■□□□□ 0.16
NPIPP1-202ENST00000534799 RRS1Q15050 365 aaKnown RBP16.04■□□□□ 0.16
NPIPP1-202ENST00000534799 AMOTL2Q9Y2J4 779 aa16.04■□□□□ 0.16
NPIPP1-202ENST00000534799 TWISTNBQ3B726 338 aaPredicted RBP16.03■□□□□ 0.16
NPIPP1-202ENST00000534799 GCC1Q96CN9 775 aa16.03■□□□□ 0.16
NPIPP1-202ENST00000534799 CACNA1FO60840 1977 aa16.03■□□□□ 0.16
NPIPP1-202ENST00000534799 EIF5BO60841 1220 aaKnown RBP16.02■□□□□ 0.16
NPIPP1-202ENST00000534799 DEKP35659 375 aaKnown RBP16.02■□□□□ 0.16
NPIPP1-202ENST00000534799 TBC1D32Q96NH3 1257 aa16.02■□□□□ 0.16
NPIPP1-202ENST00000534799 N4BP2Q86UW6 1770 aaPredicted RBP16.02■□□□□ 0.15
NPIPP1-202ENST00000534799 FBLN1P23142 703 aa16.01■□□□□ 0.15
NPIPP1-202ENST00000534799 LAS1LQ9Y4W2 734 aaKnown RBP16.01■□□□□ 0.15
NPIPP1-202ENST00000534799 PHRF1Q9P1Y6 1649 aaKnown RBP16.01■□□□□ 0.15
NPIPP1-202ENST00000534799 RTL1A6NKG5 1358 aa16■□□□□ 0.15
NPIPP1-202ENST00000534799 NUCB1Q02818 461 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms