RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 NRKQ7Z2Y5 1582 aa18.72■□□□□ 0.59
COPB1-209ENST00000533096 ARHGEF28Q8N1W1 1705 aaKnown RBP18.72■□□□□ 0.59
COPB1-209ENST00000533096 L3MBTL2Q969R5 705 aa18.72■□□□□ 0.59
COPB1-209ENST00000533096 ACSBG1Q96GR2 724 aa18.72■□□□□ 0.59
COPB1-209ENST00000533096 CARD10Q9BWT7 1032 aa18.72■□□□□ 0.59
COPB1-209ENST00000533096 USP6P35125 1406 aa18.72■□□□□ 0.59
COPB1-209ENST00000533096 BRD4O60885 1362 aaPredicted RBP18.71■□□□□ 0.59
COPB1-209ENST00000533096 NINLQ9Y2I6 1382 aa18.71■□□□□ 0.59
COPB1-209ENST00000533096 NEUROD1Q13562 356 aa18.71■□□□□ 0.59
COPB1-209ENST00000533096 SLC15A2Q16348 729 aa18.71■□□□□ 0.59
COPB1-209ENST00000533096 ITSN1Q15811 1721 aa18.71■□□□□ 0.59
COPB1-209ENST00000533096 PTGER2P43116 358 aa18.7■□□□□ 0.58
COPB1-209ENST00000533096 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.7■□□□□ 0.58
COPB1-209ENST00000533096 SIN3AQ96ST3 1273 aa18.69■□□□□ 0.58
COPB1-209ENST00000533096 FHDC1Q9C0D6 1143 aaPredicted RBP18.69■□□□□ 0.58
COPB1-209ENST00000533096 NLRP2Q9NX02 1062 aa18.69■□□□□ 0.58
COPB1-209ENST00000533096 SYT17Q9BSW7 474 aa18.68■□□□□ 0.58
COPB1-209ENST00000533096 LMO7Q8WWI1 1683 aa18.67■□□□□ 0.58
COPB1-209ENST00000533096 NUP188Q5SRE5 1749 aa18.66■□□□□ 0.58
COPB1-209ENST00000533096 ZNF784Q8NCA9 323 aaPredicted RBP18.64■□□□□ 0.57
COPB1-209ENST00000533096 TMC1Q8TDI8 760 aa18.64■□□□□ 0.57
COPB1-209ENST00000533096 MTFR1LQ9H019 292 aa18.64■□□□□ 0.57
COPB1-209ENST00000533096 TOPAZ1Q8N9V7 1692 aa18.63■□□□□ 0.57
COPB1-209ENST00000533096 RREB1Q92766 1687 aa18.63■□□□□ 0.57
COPB1-209ENST00000533096 KLHL34Q8N239 644 aa18.63■□□□□ 0.57
COPB1-209ENST00000533096 KTN1Q86UP2 1357 aaKnown RBP18.63■□□□□ 0.57
COPB1-209ENST00000533096 ARXQ96QS3 562 aa18.62■□□□□ 0.57
COPB1-209ENST00000533096 TTC21AQ8NDW8 1320 aa18.62■□□□□ 0.57
COPB1-209ENST00000533096 CPSF1Q10570 1443 aaKnown RBP18.62■□□□□ 0.57
COPB1-209ENST00000533096 NME9Q86XW9 330 aa18.61■□□□□ 0.57
COPB1-209ENST00000533096 IL2RBP14784 551 aa18.6■□□□□ 0.57
COPB1-209ENST00000533096 DDX54Q8TDD1 881 aaKnown RBP18.6■□□□□ 0.57
COPB1-209ENST00000533096 SLIT3O75094 1523 aa18.59■□□□□ 0.57
COPB1-209ENST00000533096 ROCK2O75116 1388 aaKnown RBP18.59■□□□□ 0.57
COPB1-209ENST00000533096 CCDC7Q96M83 1385 aa18.59■□□□□ 0.57
COPB1-209ENST00000533096 GPR162Q16538 588 aa18.59■□□□□ 0.57
COPB1-209ENST00000533096 PELP1Q8IZL8 1130 aaKnown RBP18.59■□□□□ 0.57
COPB1-209ENST00000533096 LTV1Q96GA3 475 aaPredicted RBP18.59■□□□□ 0.57
COPB1-209ENST00000533096 PARP4Q9UKK3 1724 aaKnown RBP18.59■□□□□ 0.57
COPB1-209ENST00000533096 ANKRD24Q8TF21 1146 aa18.58■□□□□ 0.56
COPB1-209ENST00000533096 BCL9O00512 1426 aa18.57■□□□□ 0.56
COPB1-209ENST00000533096 KCNQ4P56696 695 aa18.56■□□□□ 0.56
COPB1-209ENST00000533096 ZNF827Q17R98 1081 aa18.56■□□□□ 0.56
COPB1-209ENST00000533096 SYTL4Q96C24 671 aaPredicted RBP18.56■□□□□ 0.56
COPB1-209ENST00000533096 SGIP1Q9BQI5 828 aa18.56■□□□□ 0.56
COPB1-209ENST00000533096 SLC12A5Q9H2X9 1139 aa18.56■□□□□ 0.56
COPB1-209ENST00000533096 LRRC4BQ9NT99 713 aa18.56■□□□□ 0.56
COPB1-209ENST00000533096 PEAK1Q9H792 1746 aa18.56■□□□□ 0.56
COPB1-209ENST00000533096 SENP3-EIF4A1A0A087X0R7 540 aa18.55■□□□□ 0.56
COPB1-209ENST00000533096 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
COPB1-209ENST00000533096 LRRC37A3O60309 1634 aa18.55■□□□□ 0.56
COPB1-209ENST00000533096 KIAA1210Q9ULL0 1709 aa18.54■□□□□ 0.56
COPB1-209ENST00000533096 ERBB3P21860 1342 aa18.52■□□□□ 0.56
COPB1-209ENST00000533096 CARD11Q9BXL7 1154 aa18.52■□□□□ 0.56
COPB1-209ENST00000533096 TFCP2L1Q9NZI6 479 aa18.52■□□□□ 0.56
COPB1-209ENST00000533096 MSH5O43196 834 aa18.51■□□□□ 0.55
COPB1-209ENST00000533096 PRIM1P49642 420 aaKnown RBP18.51■□□□□ 0.55
COPB1-209ENST00000533096 C1QTNF8P60827 252 aa18.51■□□□□ 0.55
COPB1-209ENST00000533096 PIK3C2AO00443 1686 aa18.5■□□□□ 0.55
COPB1-209ENST00000533096 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
COPB1-209ENST00000533096 COL18A1P39060 1754 aa18.5■□□□□ 0.55
COPB1-209ENST00000533096 POLD1P28340 1107 aa18.5■□□□□ 0.55
COPB1-209ENST00000533096 FBLN1P23142 703 aa18.49■□□□□ 0.55
COPB1-209ENST00000533096 TNS2Q63HR2 1409 aa18.49■□□□□ 0.55
COPB1-209ENST00000533096 TERF2IPQ9NYB0 399 aa18.48■□□□□ 0.55
COPB1-209ENST00000533096 USP31Q70CQ4 1352 aa18.47■□□□□ 0.55
COPB1-209ENST00000533096 IP6K1Q92551 441 aa18.47■□□□□ 0.55
COPB1-209ENST00000533096 AKT1S1Q96B36 256 aa18.47■□□□□ 0.55
COPB1-209ENST00000533096 CASZ1Q86V15 1759 aa18.47■□□□□ 0.55
COPB1-209ENST00000533096 MYOM1P52179 1685 aa18.47■□□□□ 0.55
COPB1-209ENST00000533096 SLC27A3Q5K4L6 730 aa18.46■□□□□ 0.55
COPB1-209ENST00000533096 SLC16A10Q8TF71 515 aa18.46■□□□□ 0.55
COPB1-209ENST00000533096 SBF2Q86WG5 1849 aa18.46■□□□□ 0.55
COPB1-209ENST00000533096 SBNO2Q9Y2G9 1366 aa18.45■□□□□ 0.54
COPB1-209ENST00000533096 NFAT5O94916 1531 aa18.45■□□□□ 0.54
COPB1-209ENST00000533096 AMPHP49418 695 aa18.45■□□□□ 0.54
COPB1-209ENST00000533096 NLGN2Q8NFZ4 835 aa18.44■□□□□ 0.54
COPB1-209ENST00000533096 ZCRB1Q8TBF4 217 aaKnown RBP18.43■□□□□ 0.54
COPB1-209ENST00000533096 PNPLA7Q6ZV29 1317 aa18.43■□□□□ 0.54
COPB1-209ENST00000533096 COG3Q96JB2 828 aa18.42■□□□□ 0.54
COPB1-209ENST00000533096 TRPM1Q7Z4N2 1603 aa18.41■□□□□ 0.54
COPB1-209ENST00000533096 RGPD5Q99666 1765 aa18.41■□□□□ 0.54
COPB1-209ENST00000533096 GIGYF1O75420 1035 aaPredicted RBP18.41■□□□□ 0.54
COPB1-209ENST00000533096 CCNL1Q9UK58 526 aaPredicted RBP18.41■□□□□ 0.54
COPB1-209ENST00000533096 RGPD3A6NKT7 1758 aaPredicted RBP18.4■□□□□ 0.54
COPB1-209ENST00000533096 RGPD4Q7Z3J3 1758 aa18.4■□□□□ 0.54
COPB1-209ENST00000533096 MSL1Q68DK7 614 aa18.4■□□□□ 0.54
COPB1-209ENST00000533096 HOXC9P31274 260 aa18.39■□□□□ 0.53
COPB1-209ENST00000533096 COL23A1Q86Y22 540 aaPredicted RBP18.38■□□□□ 0.53
COPB1-209ENST00000533096 USHBP1Q8N6Y0 703 aa18.38■□□□□ 0.53
COPB1-209ENST00000533096 MAP3K19Q56UN5 1328 aa18.38■□□□□ 0.53
COPB1-209ENST00000533096 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
COPB1-209ENST00000533096 A0A1W2PP64 1363 aa18.37■□□□□ 0.53
COPB1-209ENST00000533096 MAP3K5Q99683 1374 aa18.37■□□□□ 0.53
COPB1-209ENST00000533096 EDC4Q6P2E9 1401 aaKnown RBP18.37■□□□□ 0.53
COPB1-209ENST00000533096 CD163L1Q9NR16 1453 aa18.37■□□□□ 0.53
COPB1-209ENST00000533096 YBX3P16989 372 aaKnown RBP eCLIP18.36■□□□□ 0.53
COPB1-209ENST00000533096 RRS1Q15050 365 aaKnown RBP18.36■□□□□ 0.53
COPB1-209ENST00000533096 NBPF6Q5VWK0 638 aa18.36■□□□□ 0.53
COPB1-209ENST00000533096 NBPF4Q96M43 638 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms