RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 U2AF1Q01081 240 aaKnown RBP eCLIP29.2■■■□□ 2.27
PACSIN3-209ENST00000532457 HSP90AB2PQ58FF8 381 aa29.2■■■□□ 2.26
PACSIN3-209ENST00000532457 SALL2Q9Y467 1007 aaPredicted RBP29.2■■■□□ 2.26
PACSIN3-209ENST00000532457 SLIT3O75094 1523 aa29.19■■■□□ 2.26
PACSIN3-209ENST00000532457 CRYBG1Q9Y4K1 1723 aa29.19■■■□□ 2.26
PACSIN3-209ENST00000532457 U2SURPO15042 1029 aaKnown RBP29.19■■■□□ 2.26
PACSIN3-209ENST00000532457 PHRF1Q9P1Y6 1649 aaKnown RBP29.18■■■□□ 2.26
PACSIN3-209ENST00000532457 NUDCQ9Y266 331 aa29.18■■■□□ 2.26
PACSIN3-209ENST00000532457 ABCA3Q99758 1704 aa29.18■■■□□ 2.26
PACSIN3-209ENST00000532457 NFAT5O94916 1531 aa29.16■■■□□ 2.26
PACSIN3-209ENST00000532457 APAF1O14727 1248 aa29.14■■■□□ 2.26
PACSIN3-209ENST00000532457 ADAMTS2O95450 1211 aa29.14■■■□□ 2.26
PACSIN3-209ENST00000532457 EIF4A2Q14240 407 aaKnown RBP29.14■■■□□ 2.26
PACSIN3-209ENST00000532457 MEX3CQ5U5Q3 659 aaKnown RBP29.14■■■□□ 2.26
PACSIN3-209ENST00000532457 AMPHP49418 695 aa29.13■■■□□ 2.25
PACSIN3-209ENST00000532457 ZC3H6P61129 1189 aaKnown RBP29.13■■■□□ 2.25
PACSIN3-209ENST00000532457 PLEKHF1Q96S99 279 aa29.11■■■□□ 2.25
PACSIN3-209ENST00000532457 LRP6O75581 1613 aa29.11■■■□□ 2.25
PACSIN3-209ENST00000532457 CPDO75976 1380 aa29.11■■■□□ 2.25
PACSIN3-209ENST00000532457 HOXC9P31274 260 aa29.1■■■□□ 2.25
PACSIN3-209ENST00000532457 RUNDC1Q96C34 613 aa29.1■■■□□ 2.25
PACSIN3-209ENST00000532457 FLT4P35916 1363 aa29.1■■■□□ 2.25
PACSIN3-209ENST00000532457 PRDM11Q9NQV5 511 aa29.1■■■□□ 2.25
PACSIN3-209ENST00000532457 KIAA0232Q92628 1395 aa29.09■■■□□ 2.25
PACSIN3-209ENST00000532457 ARHGEF25Q86VW2 580 aa29.08■■■□□ 2.25
PACSIN3-209ENST00000532457 HMOX1P09601 288 aa29.07■■■□□ 2.24
PACSIN3-209ENST00000532457 TCP11L2Q8N4U5 519 aa29.06■■■□□ 2.24
PACSIN3-209ENST00000532457 IP6K1Q92551 441 aa29.06■■■□□ 2.24
PACSIN3-209ENST00000532457 RSPH6AQ9H0K4 717 aa29.06■■■□□ 2.24
PACSIN3-209ENST00000532457 LTN1O94822 1766 aa29.05■■■□□ 2.24
PACSIN3-209ENST00000532457 ZBTB7CA1YPR0 619 aa29.05■■■□□ 2.24
PACSIN3-209ENST00000532457 FCHSD2O94868 740 aa29.05■■■□□ 2.24
PACSIN3-209ENST00000532457 NGLY1Q96IV0 654 aa29.05■■■□□ 2.24
PACSIN3-209ENST00000532457 C8orf37Q96NL8 207 aa29.05■■■□□ 2.24
PACSIN3-209ENST00000532457 KIF24Q5T7B8 1368 aa29.05■■■□□ 2.24
PACSIN3-209ENST00000532457 FAM83GA6ND36 823 aa29.04■■■□□ 2.24
PACSIN3-209ENST00000532457 RRP7AQ9Y3A4 280 aaKnown RBP29.03■■■□□ 2.24
PACSIN3-209ENST00000532457 CHRNA2Q15822 529 aa29.01■■■□□ 2.24
PACSIN3-209ENST00000532457 COL14A1Q05707 1796 aaKnown RBP29.01■■■□□ 2.23
PACSIN3-209ENST00000532457 AEBP1Q8IUX7 1158 aa29.01■■■□□ 2.23
PACSIN3-209ENST00000532457 ZNF521Q96K83 1311 aa29■■■□□ 2.23
PACSIN3-209ENST00000532457 PRKAR2BP31323 418 aa29■■■□□ 2.23
PACSIN3-209ENST00000532457 AXIN2Q9Y2T1 843 aa29■■■□□ 2.23
PACSIN3-209ENST00000532457 RTL1A6NKG5 1358 aa29■■■□□ 2.23
PACSIN3-209ENST00000532457 LTV1Q96GA3 475 aaPredicted RBP28.99■■■□□ 2.23
PACSIN3-209ENST00000532457 CDCA7LQ96GN5 454 aa28.99■■■□□ 2.23
PACSIN3-209ENST00000532457 PHACTR3Q96KR7 559 aa28.99■■■□□ 2.23
PACSIN3-209ENST00000532457 EYA1Q99502 592 aa28.99■■■□□ 2.23
PACSIN3-209ENST00000532457 NEUROD2Q15784 382 aa28.99■■■□□ 2.23
PACSIN3-209ENST00000532457 RGPD1P0DJD0 1748 aa28.98■■■□□ 2.23
PACSIN3-209ENST00000532457 SULT6B1Q6IMI4 303 aa28.98■■■□□ 2.23
PACSIN3-209ENST00000532457 ABCC6O95255 1503 aa28.98■■■□□ 2.23
PACSIN3-209ENST00000532457 FNBP4Q8N3X1 1017 aaPredicted RBP28.97■■■□□ 2.23
PACSIN3-209ENST00000532457 BTG4Q9NY30 223 aa28.97■■■□□ 2.23
PACSIN3-209ENST00000532457 SLIT2O94813 1529 aa28.94■■■□□ 2.22
PACSIN3-209ENST00000532457 TMPOP42166 694 aaKnown RBP28.94■■■□□ 2.22
PACSIN3-209ENST00000532457 PHF23Q9BUL5 403 aaPredicted RBP28.94■■■□□ 2.22
PACSIN3-209ENST00000532457 PNNQ9H307 717 aaKnown RBP28.94■■■□□ 2.22
PACSIN3-209ENST00000532457 AFF2P51816 1311 aa28.93■■■□□ 2.22
PACSIN3-209ENST00000532457 NWD2Q9ULI1 1742 aa28.93■■■□□ 2.22
PACSIN3-209ENST00000532457 PLCH1Q4KWH8 1693 aa28.93■■■□□ 2.22
PACSIN3-209ENST00000532457 IGSF1Q8N6C5 1336 aa28.93■■■□□ 2.22
PACSIN3-209ENST00000532457 LMO7Q8WWI1 1683 aa28.92■■■□□ 2.22
PACSIN3-209ENST00000532457 WWC1Q8IX03 1113 aa28.92■■■□□ 2.22
PACSIN3-209ENST00000532457 USP21Q9UK80 565 aa28.92■■■□□ 2.22
PACSIN3-209ENST00000532457 EVA1CP58658 441 aa28.92■■■□□ 2.22
PACSIN3-209ENST00000532457 COL18A1P39060 1754 aa28.92■■■□□ 2.22
PACSIN3-209ENST00000532457 PDE3BQ13370 1112 aa28.91■■■□□ 2.22
PACSIN3-209ENST00000532457 NGEFQ8N5V2 710 aa28.91■■■□□ 2.22
PACSIN3-209ENST00000532457 MAPK8IP3Q9UPT6 1336 aa28.91■■■□□ 2.22
PACSIN3-209ENST00000532457 UNC5CLQ8IV45 518 aa28.9■■■□□ 2.22
PACSIN3-209ENST00000532457 SPINK5Q9NQ38 1064 aaPredicted RBP28.9■■■□□ 2.22
PACSIN3-209ENST00000532457 CAMTA1Q9Y6Y1 1673 aa28.9■■■□□ 2.22
PACSIN3-209ENST00000532457 NBPF6Q5VWK0 638 aa28.9■■■□□ 2.22
PACSIN3-209ENST00000532457 ZNF772Q68DY9 489 aaPredicted RBP28.9■■■□□ 2.22
PACSIN3-209ENST00000532457 NBPF4Q96M43 638 aa28.9■■■□□ 2.22
PACSIN3-209ENST00000532457 TRIM35Q9UPQ4 493 aa28.88■■■□□ 2.21
PACSIN3-209ENST00000532457 RGPD5Q99666 1765 aa28.88■■■□□ 2.21
PACSIN3-209ENST00000532457 ANKRD24Q8TF21 1146 aa28.87■■■□□ 2.21
PACSIN3-209ENST00000532457 BCL9LQ86UU0 1499 aa28.87■■■□□ 2.21
PACSIN3-209ENST00000532457 CCDC27Q2M243 656 aa28.87■■■□□ 2.21
PACSIN3-209ENST00000532457 USHBP1Q8N6Y0 703 aa28.87■■■□□ 2.21
PACSIN3-209ENST00000532457 STRN4Q9NRL3 753 aa28.87■■■□□ 2.21
PACSIN3-209ENST00000532457 KDRP35968 1356 aa28.87■■■□□ 2.21
PACSIN3-209ENST00000532457 COL5A2P05997 1499 aaPredicted RBP28.86■■■□□ 2.21
PACSIN3-209ENST00000532457 RIPK4P57078 832 aa28.86■■■□□ 2.21
PACSIN3-209ENST00000532457 NCBP3Q53F19 620 aaKnown RBP28.86■■■□□ 2.21
PACSIN3-209ENST00000532457 GOLGA2Q08379 1002 aa28.85■■■□□ 2.21
PACSIN3-209ENST00000532457 ERBB3P21860 1342 aa28.85■■■□□ 2.21
PACSIN3-209ENST00000532457 CSB-PGBD3P0DP91 1061 aa28.85■■■□□ 2.21
PACSIN3-209ENST00000532457 NFE2L2Q16236 605 aa28.84■■■□□ 2.21
PACSIN3-209ENST00000532457 RGPD2P0DJD1 1756 aa28.84■■■□□ 2.21
PACSIN3-209ENST00000532457 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.83■■■□□ 2.21
PACSIN3-209ENST00000532457 SLFN5Q08AF3 891 aa28.83■■■□□ 2.21
PACSIN3-209ENST00000532457 WDR17Q8IZU2 1322 aa28.83■■■□□ 2.21
PACSIN3-209ENST00000532457 TRPC5Q9UL62 973 aaPredicted RBP28.83■■■□□ 2.21
PACSIN3-209ENST00000532457 NRAPQ86VF7 1730 aa28.82■■■□□ 2.2
PACSIN3-209ENST00000532457 TRMT2AQ8IZ69 625 aaKnown RBP28.82■■■□□ 2.2
PACSIN3-209ENST00000532457 NEFMP07197 916 aa28.8■■■□□ 2.2
PACSIN3-209ENST00000532457 VPS72Q15906 364 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms